RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 CCDC85CA6NKD9 419 aa11.77□□□□□ -0.53
THUMPD1-202ENST00000396083 SNHG28P0DPA3 235 aa11.77□□□□□ -0.53
THUMPD1-202ENST00000396083 TMEM87BQ96K49 555 aa11.77□□□□□ -0.53
THUMPD1-202ENST00000396083 PURBQ96QR8 312 aaKnown RBP11.77□□□□□ -0.53
THUMPD1-202ENST00000396083 TEX13BQ9BXU2 312 aa11.77□□□□□ -0.53
THUMPD1-202ENST00000396083 CCPG1Q9ULG6 757 aa11.77□□□□□ -0.53
THUMPD1-202ENST00000396083 PTPN22Q9Y2R2 807 aa11.77□□□□□ -0.53
THUMPD1-202ENST00000396083 LAMA3Q16787 3333 aa11.77□□□□□ -0.53
THUMPD1-202ENST00000396083 RPS6KB1P23443 525 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 CCT2P78371 535 aaKnown RBP11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 TSGA10IPQ3SY00 556 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 SLC9C1Q4G0N8 1177 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 APOA5Q6Q788 366 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 NSMFQ6X4W1 530 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 PLEKHH3Q7Z736 793 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 REPS2Q8NFH8 660 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 CTCFLQ8NI51 663 aaPredicted RBP11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 CYP46A1Q9Y6A2 500 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 ZNFX1Q9P2E3 1918 aaKnown RBP11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 ZNF536O15090 1300 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 PSMA5P28066 241 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 ADORA2AP29274 412 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 TRIM32Q13049 653 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 CDC37Q16543 378 aaPredicted RBP11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 SLC35G1Q2M3R5 365 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 NOM1Q5C9Z4 860 aaKnown RBP11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 GPATCH4Q5T3I0 446 aaKnown RBP11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 RUFY3Q7L099 469 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 DPP9Q86TI2 863 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 FAM160B2Q86V87 743 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 MB21D1Q8N884 522 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 ANKS1AQ92625 1134 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 NCOA5Q9HCD5 579 aaKnown RBP11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 ADAMTS5Q9UNA0 930 aa11.76□□□□□ -0.53
THUMPD1-202ENST00000396083 GOLGA8BA8MQT2 603 aa11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 CYTH3O43739 400 aa11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 MUM1L1Q5H9M0 696 aa11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 SYNE3Q6ZMZ3 975 aa11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 ANKRD35Q8N283 1001 aa11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 PIGSQ96S52 555 aa11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 NUDT12Q9BQG2 462 aa11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 DAXXQ9UER7 740 aaPredicted RBP11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 HPS5Q9UPZ3 1129 aa11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 HMGB1P09429 215 aaKnown RBP11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 MAPK4P31152 587 aa11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 ADD1P35611 737 aaKnown RBP11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 NEK4P51957 841 aa11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 KCNB2Q92953 911 aa11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 DDX11Q96FC9 970 aa11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 C22orf23Q9BZE7 217 aa11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 JMJD4Q9H9V9 463 aa11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 RNF146Q9NTX7 359 aa11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 SYNPO2Q9UMS6 1093 aa11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 MCM3APO60318 1980 aa11.75□□□□□ -0.53
THUMPD1-202ENST00000396083 NFIBO00712 420 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 ZBTB43O43298 467 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 ADCY3O60266 1144 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 HOXD10P28358 340 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 LIFRP42702 1097 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 MTFR1Q15390 333 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 QRICH1Q2TAL8 776 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 ASPRV1Q53RT3 343 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 FBXO46Q6PJ61 603 aaPredicted RBP11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 TRERF1Q96PN7 1200 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 PDRG1Q9NUG6 133 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 PALM3A6NDB9 673 aaPredicted RBP11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 COBLO75128 1261 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 FCER1AP12319 257 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 KCTD2Q14681 263 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 GRM4Q14833 912 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 ARHGEF6Q15052 776 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 FANCBQ8NB91 859 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 NPLOC4Q8TAT6 608 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 GTF3C2Q8WUA4 911 aaPredicted RBP11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 TBC1D5Q92609 795 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 ABHD8Q96I13 439 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 MMP19Q99542 508 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 ZSWIM6Q9HCJ5 1215 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 GJD2Q9UKL4 321 aa11.74□□□□□ -0.53
THUMPD1-202ENST00000396083 PTPDC1A2A3K4 754 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 GOLGA8AA7E2F4 631 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 CDC27P30260 824 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 GRK4P32298 578 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 CYP2C19P33261 490 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 CNTN2Q02246 1040 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 TOB2Q14106 344 aaPredicted RBP11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 RIOX2Q8IUF8 465 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 TMTC2Q8N394 836 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 SRBD1Q8N5C6 995 aaKnown RBP11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 TRIB2Q92519 343 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 FLRT1Q9NZU1 646 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 PDE4DIPQ5VU43 2346 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 PTPREP23469 700 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 SOX10P56693 466 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 ANO1Q5XXA6 986 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 SGMS1Q86VZ5 419 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 RANBP17Q9H2T7 1088 aaKnown RBP11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 PLXNB2O15031 1838 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 TNRC18O15417 2968 aaPredicted RBP11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 PPP1R11O60927 126 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms