RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 PHOSPHO2Q8TCD6 241 aa16.66■□□□□ 0.26
VCPKMT-201ENST00000395859 RIPK3Q9Y572 518 aa16.66■□□□□ 0.26
VCPKMT-201ENST00000395859 PTPRSQ13332 1948 aa16.65■□□□□ 0.26
VCPKMT-201ENST00000395859 MPHOSPH10O00566 681 aaKnown RBP16.65■□□□□ 0.26
VCPKMT-201ENST00000395859 CABYRO75952 493 aa16.65■□□□□ 0.26
VCPKMT-201ENST00000395859 TTC39AQ5SRH9 613 aa16.65■□□□□ 0.26
VCPKMT-201ENST00000395859 ANKS1AQ92625 1134 aa16.65■□□□□ 0.26
VCPKMT-201ENST00000395859 SLC9A7Q96T83 725 aa16.65■□□□□ 0.26
VCPKMT-201ENST00000395859 UBE2ZQ9H832 354 aaPredicted RBP16.65■□□□□ 0.26
VCPKMT-201ENST00000395859 GNEQ9Y223 722 aaKnown RBP16.65■□□□□ 0.26
VCPKMT-201ENST00000395859 CACNA1HO95180 2353 aa16.65■□□□□ 0.26
VCPKMT-201ENST00000395859 TET1Q8NFU7 2136 aa16.64■□□□□ 0.25
VCPKMT-201ENST00000395859 ZFHX2Q9C0A1 2572 aaPredicted RBP16.64■□□□□ 0.25
VCPKMT-201ENST00000395859 IL9P15248 144 aa16.64■□□□□ 0.25
VCPKMT-201ENST00000395859 TNNI3KQ59H18 835 aa16.64■□□□□ 0.25
VCPKMT-201ENST00000395859 TMED8Q6PL24 325 aaPredicted RBP16.64■□□□□ 0.25
VCPKMT-201ENST00000395859 UIMC1Q96RL1 719 aa16.64■□□□□ 0.25
VCPKMT-201ENST00000395859 FPGT-TNNI3KV9GXZ4 949 aa16.64■□□□□ 0.25
VCPKMT-201ENST00000395859 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.63■□□□□ 0.25
VCPKMT-201ENST00000395859 DCXO43602 365 aa16.63■□□□□ 0.25
VCPKMT-201ENST00000395859 AKR1B1P15121 316 aa16.63■□□□□ 0.25
VCPKMT-201ENST00000395859 ICA1Q05084 483 aa16.63■□□□□ 0.25
VCPKMT-201ENST00000395859 CCDC158Q5M9N0 1113 aa16.63■□□□□ 0.25
VCPKMT-201ENST00000395859 ARMCX2Q7L311 632 aa16.63■□□□□ 0.25
VCPKMT-201ENST00000395859 HERC6Q8IVU3 1022 aa16.63■□□□□ 0.25
VCPKMT-201ENST00000395859 ARHGEF10LQ9HCE6 1279 aa16.63■□□□□ 0.25
VCPKMT-201ENST00000395859 PNMA6EA0A0J9YXQ4 647 aa16.62■□□□□ 0.25
VCPKMT-201ENST00000395859 GRXCR2A6NFK2 248 aa16.62■□□□□ 0.25
VCPKMT-201ENST00000395859 ATP2A1O14983 1001 aa16.62■□□□□ 0.25
VCPKMT-201ENST00000395859 TEX13BQ9BXU2 312 aa16.62■□□□□ 0.25
VCPKMT-201ENST00000395859 SH2D4AQ9H788 454 aa16.62■□□□□ 0.25
VCPKMT-201ENST00000395859 MRS2Q9HD23 443 aa16.62■□□□□ 0.25
VCPKMT-201ENST00000395859 TECTAO75443 2155 aa16.61■□□□□ 0.25
VCPKMT-201ENST00000395859 ST18O60284 1047 aa16.61■□□□□ 0.25
VCPKMT-201ENST00000395859 IDH1O75874 414 aaKnown RBP16.61■□□□□ 0.25
VCPKMT-201ENST00000395859 POLR3DP05423 398 aaPredicted RBP16.61■□□□□ 0.25
VCPKMT-201ENST00000395859 G3BP1Q13283 466 aaKnown RBP eCLIP16.61■□□□□ 0.25
VCPKMT-201ENST00000395859 CSPP1Q1MSJ5 1256 aa16.61■□□□□ 0.25
VCPKMT-201ENST00000395859 SAMD1Q6SPF0 538 aaPredicted RBP16.61■□□□□ 0.25
VCPKMT-201ENST00000395859 HFE2Q6ZVN8 426 aa16.61■□□□□ 0.25
VCPKMT-201ENST00000395859 ALDH8A1Q9H2A2 487 aaPredicted RBP16.61■□□□□ 0.25
VCPKMT-201ENST00000395859 DBNLQ9UJU6 430 aaKnown RBP16.61■□□□□ 0.25
VCPKMT-201ENST00000395859 NOB1Q9ULX3 412 aaKnown RBP16.61■□□□□ 0.25
VCPKMT-201ENST00000395859 MYH8P13535 1937 aa16.6■□□□□ 0.25
VCPKMT-201ENST00000395859 LCHNA4D1U4 455 aa16.6■□□□□ 0.25
VCPKMT-201ENST00000395859 C19orf67A6NJJ6 358 aa16.6■□□□□ 0.25
VCPKMT-201ENST00000395859 PTGS1P23219 599 aa16.6■□□□□ 0.25
VCPKMT-201ENST00000395859 FSCN1Q16658 493 aaKnown RBP16.6■□□□□ 0.25
VCPKMT-201ENST00000395859 SNRNP48Q6IEG0 339 aaKnown RBP16.6■□□□□ 0.25
VCPKMT-201ENST00000395859 CCDC144CPQ8IYA2 1237 aa16.6■□□□□ 0.25
VCPKMT-201ENST00000395859 NEK9Q8TD19 979 aa16.6■□□□□ 0.25
VCPKMT-201ENST00000395859 GDPD5Q8WTR4 605 aa16.6■□□□□ 0.25
VCPKMT-201ENST00000395859 DDX11Q96FC9 970 aa16.6■□□□□ 0.25
VCPKMT-201ENST00000395859 ANTXR1Q9H6X2 564 aa16.6■□□□□ 0.25
VCPKMT-201ENST00000395859 SMC4Q9NTJ3 1288 aa16.6■□□□□ 0.25
VCPKMT-201ENST00000395859 SWAP70Q9UH65 585 aa16.6■□□□□ 0.25
VCPKMT-201ENST00000395859 TANC1Q9C0D5 1861 aa16.59■□□□□ 0.25
VCPKMT-201ENST00000395859 GNAI3P08754 354 aa16.59■□□□□ 0.25
VCPKMT-201ENST00000395859 CYP2D6P10635 497 aa16.59■□□□□ 0.25
VCPKMT-201ENST00000395859 EEF2P13639 858 aaKnown RBP16.59■□□□□ 0.25
VCPKMT-201ENST00000395859 SSTR3P32745 418 aaPredicted RBP16.59■□□□□ 0.25
VCPKMT-201ENST00000395859 PSMC6P62333 389 aa16.59■□□□□ 0.25
VCPKMT-201ENST00000395859 FOXK2Q01167 660 aa16.59■□□□□ 0.25
VCPKMT-201ENST00000395859 PTCRAQ6ISU1 281 aaPredicted RBP16.59■□□□□ 0.25
VCPKMT-201ENST00000395859 PRSS33Q8NF86 280 aa16.59■□□□□ 0.25
VCPKMT-201ENST00000395859 DYNLL2Q96FJ2 89 aa16.59■□□□□ 0.25
VCPKMT-201ENST00000395859 DCP1AQ9NPI6 582 aaPredicted RBP16.59■□□□□ 0.25
VCPKMT-201ENST00000395859 MCM9Q9NXL9 1143 aa16.59■□□□□ 0.25
VCPKMT-201ENST00000395859 VPS13AQ96RL7 3174 aa16.59■□□□□ 0.25
VCPKMT-201ENST00000395859 CYP2C9P11712 490 aa16.58■□□□□ 0.24
VCPKMT-201ENST00000395859 KCNA5P22460 613 aa16.58■□□□□ 0.24
VCPKMT-201ENST00000395859 RFC2P35250 354 aa16.58■□□□□ 0.24
VCPKMT-201ENST00000395859 TNFAIP2Q03169 654 aa16.58■□□□□ 0.24
VCPKMT-201ENST00000395859 FAM83BQ5T0W9 1011 aa16.58■□□□□ 0.24
VCPKMT-201ENST00000395859 DEFB128Q7Z7B8 93 aa16.58■□□□□ 0.24
VCPKMT-201ENST00000395859 TLK2Q86UE8 772 aa16.58■□□□□ 0.24
VCPKMT-201ENST00000395859 API5Q9BZZ5 524 aaKnown RBP16.58■□□□□ 0.24
VCPKMT-201ENST00000395859 SUGCTQ9HAC7 445 aa16.58■□□□□ 0.24
VCPKMT-201ENST00000395859 TRMT13Q9NUP7 481 aaKnown RBP16.58■□□□□ 0.24
VCPKMT-201ENST00000395859 TLR7Q9NYK1 1049 aaKnown RBP16.58■□□□□ 0.24
VCPKMT-201ENST00000395859 GREB1LQ9C091 1923 aaPredicted RBP16.58■□□□□ 0.24
VCPKMT-201ENST00000395859 KIF28PB7ZC32 967 aa16.57■□□□□ 0.24
VCPKMT-201ENST00000395859 ACTN1P12814 892 aa16.57■□□□□ 0.24
VCPKMT-201ENST00000395859 SMPD1P17405 629 aa16.57■□□□□ 0.24
VCPKMT-201ENST00000395859 ZP2Q05996 745 aa16.57■□□□□ 0.24
VCPKMT-201ENST00000395859 FAM133AQ8N9E0 248 aa16.57■□□□□ 0.24
VCPKMT-201ENST00000395859 CCDC17Q96LX7 622 aa16.57■□□□□ 0.24
VCPKMT-201ENST00000395859 SLF1Q9BQI6 1058 aa16.57■□□□□ 0.24
VCPKMT-201ENST00000395859 PTPRZ1P23471 2315 aaPredicted RBP16.56■□□□□ 0.24
VCPKMT-201ENST00000395859 TNKSO95271 1327 aa16.56■□□□□ 0.24
VCPKMT-201ENST00000395859 E9PSI1 815 aa16.56■□□□□ 0.24
VCPKMT-201ENST00000395859 POLA2Q14181 598 aa16.56■□□□□ 0.24
VCPKMT-201ENST00000395859 COL19A1Q14993 1142 aa16.56■□□□□ 0.24
VCPKMT-201ENST00000395859 TMEM63BQ5T3F8 832 aa16.56■□□□□ 0.24
VCPKMT-201ENST00000395859 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.56■□□□□ 0.24
VCPKMT-201ENST00000395859 ALG13Q9NP73 1137 aaKnown RBP16.56■□□□□ 0.24
VCPKMT-201ENST00000395859 Q9Y3F1 56 aa16.56■□□□□ 0.24
VCPKMT-201ENST00000395859 SCN10AQ9Y5Y9 1956 aa16.56■□□□□ 0.24
VCPKMT-201ENST00000395859 SIP14410 1827 aa16.56■□□□□ 0.24
VCPKMT-201ENST00000395859 ZNF536O15090 1300 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms