RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 SH3GLB2Q9NR46 395 aa22.14■■□□□ 1.13
LMNB1-202ENST00000395354 MTMR7Q9Y216 660 aa22.14■■□□□ 1.13
LMNB1-202ENST00000395354 PPP6R2O75170 966 aa22.13■■□□□ 1.13
LMNB1-202ENST00000395354 HMGCS2P54868 508 aa22.13■■□□□ 1.13
LMNB1-202ENST00000395354 C1QTNF8P60827 252 aa22.13■■□□□ 1.13
LMNB1-202ENST00000395354 USP17L2Q6R6M4 530 aa22.13■■□□□ 1.13
LMNB1-202ENST00000395354 PAXIP1Q6ZW49 1069 aaPredicted RBP22.13■■□□□ 1.13
LMNB1-202ENST00000395354 JMYQ8N9B5 988 aa22.13■■□□□ 1.13
LMNB1-202ENST00000395354 GMCL1P1Q8NEA9 526 aa22.13■■□□□ 1.13
LMNB1-202ENST00000395354 NUP62CLQ9H1M0 184 aa22.13■■□□□ 1.13
LMNB1-202ENST00000395354 DACT1Q9NYF0 836 aa22.13■■□□□ 1.13
LMNB1-202ENST00000395354 PCDHA7Q9UN72 937 aa22.13■■□□□ 1.13
LMNB1-202ENST00000395354 KRT2P35908 639 aa22.12■■□□□ 1.13
LMNB1-202ENST00000395354 SNAPC2Q13487 334 aa22.12■■□□□ 1.13
LMNB1-202ENST00000395354 DGKZQ13574 1117 aa22.12■■□□□ 1.13
LMNB1-202ENST00000395354 TPRNQ4KMQ1 711 aa22.12■■□□□ 1.13
LMNB1-202ENST00000395354 SLFN13Q68D06 897 aa22.12■■□□□ 1.13
LMNB1-202ENST00000395354 CCAR1Q8IX12 1150 aaKnown RBP22.12■■□□□ 1.13
LMNB1-202ENST00000395354 SPICE1Q8N0Z3 855 aa22.12■■□□□ 1.13
LMNB1-202ENST00000395354 SPZ1Q9BXG8 430 aa22.12■■□□□ 1.13
LMNB1-202ENST00000395354 EMILIN3Q9NT22 766 aa22.12■■□□□ 1.13
LMNB1-202ENST00000395354 VPS54Q9P1Q0 977 aa22.12■■□□□ 1.13
LMNB1-202ENST00000395354 RASSF10A6NK89 507 aa22.12■■□□□ 1.13
LMNB1-202ENST00000395354 NDUFB10O96000 172 aa22.12■■□□□ 1.13
LMNB1-202ENST00000395354 SLC10A3P09131 477 aa22.12■■□□□ 1.13
LMNB1-202ENST00000395354 SH3D19Q5HYK7 790 aa22.12■■□□□ 1.13
LMNB1-202ENST00000395354 KIAA1755Q5JYT7 1200 aa22.12■■□□□ 1.13
LMNB1-202ENST00000395354 CCDC73Q6ZRK6 1079 aa22.12■■□□□ 1.13
LMNB1-202ENST00000395354 CLSTN2Q9H4D0 955 aa22.12■■□□□ 1.13
LMNB1-202ENST00000395354 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.12■■□□□ 1.13
LMNB1-202ENST00000395354 TMOD4Q9NZQ9 345 aa22.12■■□□□ 1.13
LMNB1-202ENST00000395354 A0A0G2JLL6 359 aaPredicted RBP22.11■■□□□ 1.13
LMNB1-202ENST00000395354 PARP1P09874 1014 aaKnown RBP22.11■■□□□ 1.13
LMNB1-202ENST00000395354 GTF2A2P52657 109 aa22.11■■□□□ 1.13
LMNB1-202ENST00000395354 PTPAQ15257 358 aa22.11■■□□□ 1.13
LMNB1-202ENST00000395354 PRRT2Q7Z6L0 340 aaPredicted RBP22.11■■□□□ 1.13
LMNB1-202ENST00000395354 STAG2Q8N3U4 1231 aa22.11■■□□□ 1.13
LMNB1-202ENST00000395354 MORC2Q9Y6X9 1032 aaPredicted RBP22.11■■□□□ 1.13
LMNB1-202ENST00000395354 FAM155AB1AL88 458 aaPredicted RBP22.1■■□□□ 1.13
LMNB1-202ENST00000395354 HTRA3P83110 453 aa22.1■■□□□ 1.13
LMNB1-202ENST00000395354 GRM1Q13255 1194 aa22.1■■□□□ 1.13
LMNB1-202ENST00000395354 CYP4F22Q6NT55 531 aa22.1■■□□□ 1.13
LMNB1-202ENST00000395354 RBM43Q6ZSC3 357 aaKnown RBP22.1■■□□□ 1.13
LMNB1-202ENST00000395354 MRPS27Q92552 414 aaKnown RBP22.1■■□□□ 1.13
LMNB1-202ENST00000395354 LPAR1Q92633 364 aa22.1■■□□□ 1.13
LMNB1-202ENST00000395354 SHISA4Q96DD7 197 aa22.1■■□□□ 1.13
LMNB1-202ENST00000395354 MS4A4AQ96JQ5 239 aa22.1■■□□□ 1.13
LMNB1-202ENST00000395354 RBSNQ9H1K0 784 aa22.1■■□□□ 1.13
LMNB1-202ENST00000395354 KLRF2D3W0D1 207 aa22.09■■□□□ 1.13
LMNB1-202ENST00000395354 NR1I2O75469 434 aa22.09■■□□□ 1.13
LMNB1-202ENST00000395354 PDHBP11177 359 aa22.09■■□□□ 1.13
LMNB1-202ENST00000395354 CETPP11597 493 aa22.09■■□□□ 1.13
LMNB1-202ENST00000395354 CALML3P27482 149 aa22.09■■□□□ 1.13
LMNB1-202ENST00000395354 SLC1A4P43007 532 aa22.09■■□□□ 1.13
LMNB1-202ENST00000395354 FAM160A1Q05DH4 1040 aa22.09■■□□□ 1.13
LMNB1-202ENST00000395354 FASTKD5Q7L8L6 764 aaKnown RBP22.09■■□□□ 1.13
LMNB1-202ENST00000395354 GMCL1Q96IK5 515 aa22.09■■□□□ 1.13
LMNB1-202ENST00000395354 C12orf42Q96LP6 360 aa22.09■■□□□ 1.13
LMNB1-202ENST00000395354 hCG_1642624A0A1W2PR95 340 aa22.08■■□□□ 1.13
LMNB1-202ENST00000395354 CTAGE5O15320 804 aa22.08■■□□□ 1.13
LMNB1-202ENST00000395354 SNHG28P0DPA3 235 aa22.08■■□□□ 1.13
LMNB1-202ENST00000395354 ASPRV1Q53RT3 343 aa22.08■■□□□ 1.13
LMNB1-202ENST00000395354 GADL1Q6ZQY3 521 aa22.08■■□□□ 1.13
LMNB1-202ENST00000395354 RASGRP2Q7LDG7 609 aa22.08■■□□□ 1.13
LMNB1-202ENST00000395354 ENGASEQ8NFI3 743 aa22.08■■□□□ 1.13
LMNB1-202ENST00000395354 NUP88Q99567 741 aaPredicted RBP22.08■■□□□ 1.13
LMNB1-202ENST00000395354 TNMDQ9H2S6 317 aa22.08■■□□□ 1.13
LMNB1-202ENST00000395354 CEP131Q9UPN4 1083 aa22.08■■□□□ 1.13
LMNB1-202ENST00000395354 BMP3P12645 472 aa22.08■■□□□ 1.12
LMNB1-202ENST00000395354 HSPA6P17066 643 aa22.08■■□□□ 1.12
LMNB1-202ENST00000395354 VCAM1P19320 739 aa22.08■■□□□ 1.12
LMNB1-202ENST00000395354 CMA1P23946 247 aa22.08■■□□□ 1.12
LMNB1-202ENST00000395354 NR5A1Q13285 461 aa22.08■■□□□ 1.12
LMNB1-202ENST00000395354 GALNT17Q6IS24 598 aa22.08■■□□□ 1.12
LMNB1-202ENST00000395354 FSIP1Q8NA03 581 aa22.08■■□□□ 1.12
LMNB1-202ENST00000395354 PROCA1Q8NCQ7 364 aaPredicted RBP22.08■■□□□ 1.12
LMNB1-202ENST00000395354 OXER1Q8TDS5 423 aa22.08■■□□□ 1.12
LMNB1-202ENST00000395354 DCAF4Q8WV16 495 aa22.08■■□□□ 1.12
LMNB1-202ENST00000395354 FUCA2Q9BTY2 467 aa22.08■■□□□ 1.12
LMNB1-202ENST00000395354 PTPRFP10586 1907 aa22.07■■□□□ 1.12
LMNB1-202ENST00000395354 CCL15-CCL14A0A0B4J2E2 113 aa22.07■■□□□ 1.12
LMNB1-202ENST00000395354 WDR46O15213 610 aaKnown RBP22.07■■□□□ 1.12
LMNB1-202ENST00000395354 TOB1P50616 345 aaPredicted RBP22.07■■□□□ 1.12
LMNB1-202ENST00000395354 NLRP5P59047 1200 aa22.07■■□□□ 1.12
LMNB1-202ENST00000395354 SNW1Q13573 536 aaKnown RBP22.07■■□□□ 1.12
LMNB1-202ENST00000395354 MOGSQ13724 837 aa22.07■■□□□ 1.12
LMNB1-202ENST00000395354 NPY5RQ15761 445 aa22.07■■□□□ 1.12
LMNB1-202ENST00000395354 CCL15Q16663 113 aa22.07■■□□□ 1.12
LMNB1-202ENST00000395354 CCDC96Q2M329 555 aa22.07■■□□□ 1.12
LMNB1-202ENST00000395354 FAM83BQ5T0W9 1011 aa22.07■■□□□ 1.12
LMNB1-202ENST00000395354 AXDND1Q5T1B0 1012 aaPredicted RBP22.07■■□□□ 1.12
LMNB1-202ENST00000395354 CCDC148Q8NFR7 591 aa22.07■■□□□ 1.12
LMNB1-202ENST00000395354 TNFRSF25Q93038 417 aa22.07■■□□□ 1.12
LMNB1-202ENST00000395354 CAPNS2Q96L46 248 aa22.07■■□□□ 1.12
LMNB1-202ENST00000395354 GOLPH3LQ9H4A5 285 aa22.07■■□□□ 1.12
LMNB1-202ENST00000395354 MANSC4A6NHS7 340 aaPredicted RBP22.06■■□□□ 1.12
LMNB1-202ENST00000395354 CYTH3O43739 400 aa22.06■■□□□ 1.12
LMNB1-202ENST00000395354 GOLGA8HP0CJ92 632 aa22.06■■□□□ 1.12
LMNB1-202ENST00000395354 ZNF543Q08ER8 600 aa22.06■■□□□ 1.12
LMNB1-202ENST00000395354 KCTD1Q719H9 257 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms