RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 KCNJ6P48051 423 aa15.79■□□□□ 0.12
SNCA-204ENST00000394989 SPATA1Q5VX52 437 aa15.79■□□□□ 0.12
SNCA-204ENST00000394989 HHIPL2Q6UWX4 724 aa15.79■□□□□ 0.12
SNCA-204ENST00000394989 ZFPM1Q8IX07 1006 aa15.79■□□□□ 0.12
SNCA-204ENST00000394989 NR1I3Q14994 352 aa15.79■□□□□ 0.12
SNCA-204ENST00000394989 PTPN14Q15678 1187 aa15.79■□□□□ 0.12
SNCA-204ENST00000394989 CDKAL1Q5VV42 579 aa15.79■□□□□ 0.12
SNCA-204ENST00000394989 TMEM139Q8IV31 216 aa15.79■□□□□ 0.12
SNCA-204ENST00000394989 PPP1R13BQ96KQ4 1090 aa15.79■□□□□ 0.12
SNCA-204ENST00000394989 SIPA1L1O43166 1804 aa15.79■□□□□ 0.12
SNCA-204ENST00000394989 GTPBP6O43824 516 aaPredicted RBP15.79■□□□□ 0.12
SNCA-204ENST00000394989 ZNF622Q969S3 477 aaKnown RBP eCLIP15.79■□□□□ 0.12
SNCA-204ENST00000394989 TEKT1Q969V4 418 aa15.79■□□□□ 0.12
SNCA-204ENST00000394989 PYM1Q9BRP8 204 aaKnown RBP15.79■□□□□ 0.12
SNCA-204ENST00000394989 SEC63Q9UGP8 760 aaKnown RBP15.79■□□□□ 0.12
SNCA-204ENST00000394989 SLX4Q8IY92 1834 aa15.78■□□□□ 0.12
SNCA-204ENST00000394989 A0A1B0GTH6 734 aa15.78■□□□□ 0.12
SNCA-204ENST00000394989 CTIFO43310 598 aaKnown RBP15.78■□□□□ 0.12
SNCA-204ENST00000394989 COBLO75128 1261 aa15.78■□□□□ 0.12
SNCA-204ENST00000394989 KIF20AO95235 890 aa15.78■□□□□ 0.12
SNCA-204ENST00000394989 DHX8Q14562 1220 aaKnown RBP15.78■□□□□ 0.12
SNCA-204ENST00000394989 CCDC12Q8WUD4 166 aaPredicted RBP15.78■□□□□ 0.12
SNCA-204ENST00000394989 PDE4CQ08493 712 aa15.78■□□□□ 0.12
SNCA-204ENST00000394989 FLAD1Q8NFF5 587 aa15.78■□□□□ 0.12
SNCA-204ENST00000394989 C6orf50Q9HD87 102 aa15.78■□□□□ 0.12
SNCA-204ENST00000394989 PAXBP1Q9Y5B6 917 aa15.78■□□□□ 0.12
SNCA-204ENST00000394989 PRPHP41219 470 aa15.77■□□□□ 0.12
SNCA-204ENST00000394989 STAT6P42226 847 aa15.77■□□□□ 0.12
SNCA-204ENST00000394989 CRKP46108 304 aa15.77■□□□□ 0.12
SNCA-204ENST00000394989 LETM2Q2VYF4 491 aa15.77■□□□□ 0.12
SNCA-204ENST00000394989 SPECC1LQ69YQ0 1117 aa15.77■□□□□ 0.12
SNCA-204ENST00000394989 KRT25Q7Z3Z0 450 aa15.77■□□□□ 0.12
SNCA-204ENST00000394989 DNAJC18Q9H819 358 aa15.77■□□□□ 0.12
SNCA-204ENST00000394989 TNS1Q9HBL0 1735 aaKnown RBP15.77■□□□□ 0.12
SNCA-204ENST00000394989 LAD1O00515 517 aa15.77■□□□□ 0.12
SNCA-204ENST00000394989 TEX33O43247 280 aa15.77■□□□□ 0.12
SNCA-204ENST00000394989 CCNT1O60563 726 aaKnown RBP15.77■□□□□ 0.12
SNCA-204ENST00000394989 TTLL1O95922 423 aa15.77■□□□□ 0.12
SNCA-204ENST00000394989 GNA11P29992 359 aa15.77■□□□□ 0.12
SNCA-204ENST00000394989 NONOQ15233 471 aaKnown RBP eCLIP15.77■□□□□ 0.12
SNCA-204ENST00000394989 PODNQ7Z5L7 613 aa15.77■□□□□ 0.12
SNCA-204ENST00000394989 TMEM260Q9NX78 707 aa15.77■□□□□ 0.12
SNCA-204ENST00000394989 BIN2Q9UBW5 565 aaPredicted RBP15.77■□□□□ 0.12
SNCA-204ENST00000394989 SWAP70Q9UH65 585 aa15.77■□□□□ 0.12
SNCA-204ENST00000394989 C10orf71Q711Q0 1435 aa15.77■□□□□ 0.11
SNCA-204ENST00000394989 MYO3BQ8WXR4 1341 aa15.77■□□□□ 0.11
SNCA-204ENST00000394989 PSDA5PKW4 1024 aaPredicted RBP15.77■□□□□ 0.11
SNCA-204ENST00000394989 EDIL3O43854 480 aa15.77■□□□□ 0.11
SNCA-204ENST00000394989 TXLNAP40222 546 aa15.77■□□□□ 0.11
SNCA-204ENST00000394989 CACNB3P54284 484 aa15.77■□□□□ 0.11
SNCA-204ENST00000394989 TC2NQ8N9U0 490 aa15.77■□□□□ 0.11
SNCA-204ENST00000394989 COA7Q96BR5 231 aa15.77■□□□□ 0.11
SNCA-204ENST00000394989 CTNND2Q9UQB3 1225 aa15.77■□□□□ 0.11
SNCA-204ENST00000394989 ESYT2A0FGR8 921 aa15.76■□□□□ 0.11
SNCA-204ENST00000394989 RPN1P04843 607 aaKnown RBP15.76■□□□□ 0.11
SNCA-204ENST00000394989 ASPRV1Q53RT3 343 aa15.76■□□□□ 0.11
SNCA-204ENST00000394989 KIAA0825Q8IV33 1275 aa15.76■□□□□ 0.11
SNCA-204ENST00000394989 TBCKQ8TEA7 893 aa15.76■□□□□ 0.11
SNCA-204ENST00000394989 CCSER1Q9C0I3 900 aa15.76■□□□□ 0.11
SNCA-204ENST00000394989 MYH4Q9Y623 1939 aa15.76■□□□□ 0.11
SNCA-204ENST00000394989 G3V3G9 751 aa15.76■□□□□ 0.11
SNCA-204ENST00000394989 SHROOM1Q2M3G4 852 aaPredicted RBP15.76■□□□□ 0.11
SNCA-204ENST00000394989 DCAF8Q5TAQ9 597 aa15.76■□□□□ 0.11
SNCA-204ENST00000394989 JAKMIP3Q5VZ66 844 aa15.76■□□□□ 0.11
SNCA-204ENST00000394989 NEK8Q86SG6 692 aa15.76■□□□□ 0.11
SNCA-204ENST00000394989 C2CD5Q86YS7 1000 aa15.76■□□□□ 0.11
SNCA-204ENST00000394989 ZDHHC15Q96MV8 337 aa15.76■□□□□ 0.11
SNCA-204ENST00000394989 PLIN2Q99541 437 aa15.76■□□□□ 0.11
SNCA-204ENST00000394989 GPCPD1Q9NPB8 672 aa15.76■□□□□ 0.11
SNCA-204ENST00000394989 ADD3Q9UEY8 706 aaKnown RBP15.76■□□□□ 0.11
SNCA-204ENST00000394989 PPP1R11O60927 126 aaPredicted RBP15.75■□□□□ 0.11
SNCA-204ENST00000394989 ZNF658Q5TYW1 1059 aaPredicted RBP15.75■□□□□ 0.11
SNCA-204ENST00000394989 RRAGBQ5VZM2 374 aa15.75■□□□□ 0.11
SNCA-204ENST00000394989 REXO1Q8N1G1 1221 aaKnown RBP15.75■□□□□ 0.11
SNCA-204ENST00000394989 CCDC112Q8NEF3 446 aa15.75■□□□□ 0.11
SNCA-204ENST00000394989 GDAQ9Y2T3 454 aa15.75■□□□□ 0.11
SNCA-204ENST00000394989 OR52Z1P0C646 297 aa15.75■□□□□ 0.11
SNCA-204ENST00000394989 ADKP55263 362 aaKnown RBP15.75■□□□□ 0.11
SNCA-204ENST00000394989 ZNF543Q08ER8 600 aa15.75■□□□□ 0.11
SNCA-204ENST00000394989 DACT2Q5SW24 774 aa15.75■□□□□ 0.11
SNCA-204ENST00000394989 SOGA3Q5TF21 947 aa15.75■□□□□ 0.11
SNCA-204ENST00000394989 ZNF772Q68DY9 489 aaPredicted RBP15.75■□□□□ 0.11
SNCA-204ENST00000394989 TTBK2Q6IQ55 1244 aa15.75■□□□□ 0.11
SNCA-204ENST00000394989 JMJD4Q9H9V9 463 aa15.75■□□□□ 0.11
SNCA-204ENST00000394989 KBTBD4Q9NVX7 518 aa15.75■□□□□ 0.11
SNCA-204ENST00000394989 PBX1P40424 430 aa15.75■□□□□ 0.11
SNCA-204ENST00000394989 UBA7P41226 1012 aa15.75■□□□□ 0.11
SNCA-204ENST00000394989 TMX4Q9H1E5 349 aaPredicted RBP15.75■□□□□ 0.11
SNCA-204ENST00000394989 FAM196BA6NMK8 535 aa15.74■□□□□ 0.11
SNCA-204ENST00000394989 KLRC4O43908 158 aa15.74■□□□□ 0.11
SNCA-204ENST00000394989 CHRNA5P30532 468 aa15.74■□□□□ 0.11
SNCA-204ENST00000394989 ADGRF4Q8IZF3 695 aa15.74■□□□□ 0.11
SNCA-204ENST00000394989 MAPK8IP1Q9UQF2 711 aa15.74■□□□□ 0.11
SNCA-204ENST00000394989 DDTLA6NHG4 134 aaPredicted RBP15.74■□□□□ 0.11
SNCA-204ENST00000394989 PRCPP42785 496 aa15.74■□□□□ 0.11
SNCA-204ENST00000394989 NCBP1Q09161 790 aaKnown RBP15.74■□□□□ 0.11
SNCA-204ENST00000394989 STRIP1Q5VSL9 837 aa15.74■□□□□ 0.11
SNCA-204ENST00000394989 POTEDQ86YR6 584 aa15.74■□□□□ 0.11
SNCA-204ENST00000394989 EHD4Q9H223 541 aa15.74■□□□□ 0.11
SNCA-204ENST00000394989 ZNF219Q9P2Y4 722 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms