RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 PLEKHG2Q9H7P9 1386 aa17.9■□□□□ 0.46
SMARCD1-202ENST00000394963 KIAA1524Q8TCG1 905 aa17.9■□□□□ 0.46
SMARCD1-202ENST00000394963 SRRTQ9BXP5 876 aaKnown RBP17.9■□□□□ 0.46
SMARCD1-202ENST00000394963 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.9■□□□□ 0.46
SMARCD1-202ENST00000394963 MTMR4Q9NYA4 1195 aa17.9■□□□□ 0.46
SMARCD1-202ENST00000394963 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.9■□□□□ 0.46
SMARCD1-202ENST00000394963 ITGB4P16144 1822 aa17.9■□□□□ 0.46
SMARCD1-202ENST00000394963 OR52Z1P0C646 297 aa17.89■□□□□ 0.45
SMARCD1-202ENST00000394963 TRIM21P19474 475 aaKnown RBP17.89■□□□□ 0.45
SMARCD1-202ENST00000394963 ARHGAP29Q52LW3 1261 aa17.89■□□□□ 0.45
SMARCD1-202ENST00000394963 ADGRF4Q8IZF3 695 aa17.89■□□□□ 0.45
SMARCD1-202ENST00000394963 TOGARAM1Q9Y4F4 1720 aa17.89■□□□□ 0.45
SMARCD1-202ENST00000394963 A0A087X0B3 334 aa17.89■□□□□ 0.45
SMARCD1-202ENST00000394963 CHMP4BP1P59074 171 aa17.89■□□□□ 0.45
SMARCD1-202ENST00000394963 SLC15A2Q16348 729 aa17.89■□□□□ 0.45
SMARCD1-202ENST00000394963 SBK1Q52WX2 424 aa17.89■□□□□ 0.45
SMARCD1-202ENST00000394963 PODNQ7Z5L7 613 aa17.89■□□□□ 0.45
SMARCD1-202ENST00000394963 MLKLQ8NB16 471 aa17.89■□□□□ 0.45
SMARCD1-202ENST00000394963 KIF18AQ8NI77 898 aa17.89■□□□□ 0.45
SMARCD1-202ENST00000394963 OSBPL5Q9H0X9 879 aaPredicted RBP17.89■□□□□ 0.45
SMARCD1-202ENST00000394963 FZD1Q9UP38 647 aa17.89■□□□□ 0.45
SMARCD1-202ENST00000394963 USP54Q70EL1 1684 aa17.89■□□□□ 0.45
SMARCD1-202ENST00000394963 SLFN14P0C7P3 912 aa17.88■□□□□ 0.45
SMARCD1-202ENST00000394963 PLCG1P19174 1290 aa17.88■□□□□ 0.45
SMARCD1-202ENST00000394963 KRT25Q7Z3Z0 450 aa17.88■□□□□ 0.45
SMARCD1-202ENST00000394963 DRC1Q96MC2 740 aa17.88■□□□□ 0.45
SMARCD1-202ENST00000394963 DEF6Q9H4E7 631 aa17.88■□□□□ 0.45
SMARCD1-202ENST00000394963 PI4KBQ9UBF8 816 aa17.88■□□□□ 0.45
SMARCD1-202ENST00000394963 PSMA7O14818 248 aa17.88■□□□□ 0.45
SMARCD1-202ENST00000394963 ZNF500O60304 480 aaPredicted RBP17.88■□□□□ 0.45
SMARCD1-202ENST00000394963 GRM4Q14833 912 aa17.88■□□□□ 0.45
SMARCD1-202ENST00000394963 R3HDM1Q15032 1099 aaKnown RBP17.88■□□□□ 0.45
SMARCD1-202ENST00000394963 SIPA1L3O60292 1781 aaPredicted RBP17.88■□□□□ 0.45
SMARCD1-202ENST00000394963 PCDHA6Q9UN73 950 aa17.88■□□□□ 0.45
SMARCD1-202ENST00000394963 PCDHA8Q9Y5H6 950 aa17.88■□□□□ 0.45
SMARCD1-202ENST00000394963 TEX33O43247 280 aa17.87■□□□□ 0.45
SMARCD1-202ENST00000394963 PDHBP11177 359 aa17.87■□□□□ 0.45
SMARCD1-202ENST00000394963 TTLL12Q14166 644 aaPredicted RBP17.87■□□□□ 0.45
SMARCD1-202ENST00000394963 MCM6Q14566 821 aa17.87■□□□□ 0.45
SMARCD1-202ENST00000394963 CSGALNACT2Q8N6G5 542 aa17.87■□□□□ 0.45
SMARCD1-202ENST00000394963 KANSL2Q9H9L4 492 aa17.87■□□□□ 0.45
SMARCD1-202ENST00000394963 POLD1P28340 1107 aa17.87■□□□□ 0.45
SMARCD1-202ENST00000394963 RHBDL3P58872 404 aa17.87■□□□□ 0.45
SMARCD1-202ENST00000394963 PAK1Q13153 545 aa17.87■□□□□ 0.45
SMARCD1-202ENST00000394963 PCDHA12Q9UN75 941 aa17.87■□□□□ 0.45
SMARCD1-202ENST00000394963 RPN1P04843 607 aaKnown RBP17.87■□□□□ 0.45
SMARCD1-202ENST00000394963 DPEP1P16444 411 aa17.87■□□□□ 0.45
SMARCD1-202ENST00000394963 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.87■□□□□ 0.45
SMARCD1-202ENST00000394963 CCDC40Q4G0X9 1142 aa17.86■□□□□ 0.45
SMARCD1-202ENST00000394963 C16orf86Q6ZW13 317 aa17.86■□□□□ 0.45
SMARCD1-202ENST00000394963 BAG1Q99933 345 aaPredicted RBP17.86■□□□□ 0.45
SMARCD1-202ENST00000394963 TMEM39BQ9GZU3 492 aa17.86■□□□□ 0.45
SMARCD1-202ENST00000394963 BARHL2Q9NY43 387 aa17.86■□□□□ 0.45
SMARCD1-202ENST00000394963 F5H6K3 240 aa17.86■□□□□ 0.45
SMARCD1-202ENST00000394963 KLRC3Q07444 240 aa17.86■□□□□ 0.45
SMARCD1-202ENST00000394963 SH2D3AQ9BRG2 576 aa17.86■□□□□ 0.45
SMARCD1-202ENST00000394963 PRDM10Q9NQV6 1147 aa17.86■□□□□ 0.45
SMARCD1-202ENST00000394963 LTBP4Q8N2S1 1624 aa17.86■□□□□ 0.45
SMARCD1-202ENST00000394963 CC2D2BQ6DHV5 1058 aa17.86■□□□□ 0.45
SMARCD1-202ENST00000394963 NSMFQ6X4W1 530 aa17.86■□□□□ 0.45
SMARCD1-202ENST00000394963 SV2BQ7L1I2 683 aa17.86■□□□□ 0.45
SMARCD1-202ENST00000394963 DDX25Q9UHL0 483 aaKnown RBP17.86■□□□□ 0.45
SMARCD1-202ENST00000394963 STAT3P40763 770 aa17.85■□□□□ 0.45
SMARCD1-202ENST00000394963 ECE1P42892 770 aa17.85■□□□□ 0.45
SMARCD1-202ENST00000394963 PLA2G4DQ86XP0 818 aa17.85■□□□□ 0.45
SMARCD1-202ENST00000394963 BAZ2AQ9UIF9 1905 aaKnown RBP17.85■□□□□ 0.45
SMARCD1-202ENST00000394963 ABCC6O95255 1503 aa17.85■□□□□ 0.45
SMARCD1-202ENST00000394963 CDC37Q16543 378 aaPredicted RBP17.85■□□□□ 0.45
SMARCD1-202ENST00000394963 CRACR2AQ9BSW2 395 aa17.85■□□□□ 0.45
SMARCD1-202ENST00000394963 CBX1P83916 185 aa17.85■□□□□ 0.45
SMARCD1-202ENST00000394963 MRFAP1L1Q96HT8 127 aa17.85■□□□□ 0.45
SMARCD1-202ENST00000394963 MYH2Q9UKX2 1941 aa17.85■□□□□ 0.45
SMARCD1-202ENST00000394963 PPP4CP60510 307 aa17.84■□□□□ 0.45
SMARCD1-202ENST00000394963 AMPD3Q01432 767 aa17.84■□□□□ 0.45
SMARCD1-202ENST00000394963 QRICH1Q2TAL8 776 aa17.84■□□□□ 0.45
SMARCD1-202ENST00000394963 HERC4Q5GLZ8 1057 aaPredicted RBP17.84■□□□□ 0.45
SMARCD1-202ENST00000394963 CCDC150Q8NCX0 1101 aa17.84■□□□□ 0.45
SMARCD1-202ENST00000394963 KIAA1024Q9UPX6 916 aa17.84■□□□□ 0.45
SMARCD1-202ENST00000394963 MYCLP12524 364 aaPredicted RBP17.84■□□□□ 0.45
SMARCD1-202ENST00000394963 IL1R1P14778 569 aa17.84■□□□□ 0.45
SMARCD1-202ENST00000394963 TDRD12Q587J7 1177 aaKnown RBP17.84■□□□□ 0.45
SMARCD1-202ENST00000394963 TEX35Q5T0J7 233 aa17.84■□□□□ 0.45
SMARCD1-202ENST00000394963 FBXL16Q8N461 479 aa17.84■□□□□ 0.45
SMARCD1-202ENST00000394963 SHISA4Q96DD7 197 aa17.84■□□□□ 0.45
SMARCD1-202ENST00000394963 STXBP3O00186 592 aa17.84■□□□□ 0.45
SMARCD1-202ENST00000394963 PSMD14O00487 310 aa17.84■□□□□ 0.45
SMARCD1-202ENST00000394963 TRAF5O00463 557 aa17.83■□□□□ 0.45
SMARCD1-202ENST00000394963 PABPC4Q13310 644 aaKnown RBP eCLIP17.83■□□□□ 0.455e-7■■□□□ 12.9
SMARCD1-202ENST00000394963 KIF4BQ2VIQ3 1234 aa17.83■□□□□ 0.45
SMARCD1-202ENST00000394963 CRY2Q49AN0 593 aa17.83■□□□□ 0.45
SMARCD1-202ENST00000394963 FAM83BQ5T0W9 1011 aa17.83■□□□□ 0.45
SMARCD1-202ENST00000394963 CACNA2D4Q7Z3S7 1137 aa17.83■□□□□ 0.45
SMARCD1-202ENST00000394963 KIAA1328Q86T90 577 aa17.83■□□□□ 0.45
SMARCD1-202ENST00000394963 HINFPQ9BQA5 517 aa17.83■□□□□ 0.45
SMARCD1-202ENST00000394963 SFI1A8K8P3 1242 aa17.83■□□□□ 0.44
SMARCD1-202ENST00000394963 ALAS1P13196 640 aa17.83■□□□□ 0.44
SMARCD1-202ENST00000394963 FBXO11Q86XK2 927 aa17.83■□□□□ 0.44
SMARCD1-202ENST00000394963 FAM207AQ9NSI2 230 aaPredicted RBP17.83■□□□□ 0.44
SMARCD1-202ENST00000394963 ZNHIT6Q9NWK9 470 aaKnown RBP17.83■□□□□ 0.44
SMARCD1-202ENST00000394963 RMND1Q9NWS8 449 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms