RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 RAB3GAP1Q15042 981 aa13.13□□□□□ -0.31
VTI1BP2-201ENST00000394154 TTF1Q15361 905 aaPredicted RBP13.13□□□□□ -0.31
VTI1BP2-201ENST00000394154 CCSAPQ6IQ19 270 aaPredicted RBP13.13□□□□□ -0.31
VTI1BP2-201ENST00000394154 FAM126BQ8IXS8 530 aa13.13□□□□□ -0.31
VTI1BP2-201ENST00000394154 GJD3Q8N144 294 aa13.13□□□□□ -0.31
VTI1BP2-201ENST00000394154 KBTBD3Q8NAB2 608 aa13.13□□□□□ -0.31
VTI1BP2-201ENST00000394154 LENG1Q96BZ8 264 aaPredicted RBP13.13□□□□□ -0.31
VTI1BP2-201ENST00000394154 SNRKQ9NRH2 765 aa13.13□□□□□ -0.31
VTI1BP2-201ENST00000394154 ATP2A2P16615 1042 aaKnown RBP13.12□□□□□ -0.31
VTI1BP2-201ENST00000394154 CST5P28325 142 aaPredicted RBP13.12□□□□□ -0.31
VTI1BP2-201ENST00000394154 ZAP70P43403 619 aa13.12□□□□□ -0.31
VTI1BP2-201ENST00000394154 PLS1Q14651 629 aa13.12□□□□□ -0.31
VTI1BP2-201ENST00000394154 TMEM67Q5HYA8 995 aa13.12□□□□□ -0.31
VTI1BP2-201ENST00000394154 KRT40Q6A162 431 aa13.12□□□□□ -0.31
VTI1BP2-201ENST00000394154 PCSK9Q8NBP7 692 aaKnown RBP13.12□□□□□ -0.31
VTI1BP2-201ENST00000394154 ACER1Q8TDN7 264 aa13.12□□□□□ -0.31
VTI1BP2-201ENST00000394154 VTI1AQ96AJ9 217 aa13.12□□□□□ -0.31
VTI1BP2-201ENST00000394154 AATFQ9NY61 560 aaKnown RBP eCLIP13.12□□□□□ -0.31
VTI1BP2-201ENST00000394154 HMG20BQ9P0W2 317 aa13.12□□□□□ -0.31
VTI1BP2-201ENST00000394154 CNPY2Q9Y2B0 182 aa13.12□□□□□ -0.31
VTI1BP2-201ENST00000394154 DIS3Q9Y2L1 958 aaKnown RBP13.12□□□□□ -0.31
VTI1BP2-201ENST00000394154 MYH7P12883 1935 aa13.11□□□□□ -0.31
VTI1BP2-201ENST00000394154 CA3P07451 260 aa13.11□□□□□ -0.31
VTI1BP2-201ENST00000394154 ANP32AP39687 249 aaKnown RBP13.11□□□□□ -0.31
VTI1BP2-201ENST00000394154 MCAMP43121 646 aa13.11□□□□□ -0.31
VTI1BP2-201ENST00000394154 TATDN1Q6P1N9 297 aa13.11□□□□□ -0.31
VTI1BP2-201ENST00000394154 CWC27Q6UX04 472 aaKnown RBP13.11□□□□□ -0.31
VTI1BP2-201ENST00000394154 KIAA1211Q6ZU35 1233 aa13.11□□□□□ -0.31
VTI1BP2-201ENST00000394154 FAM178BQ8IXR5 827 aa13.11□□□□□ -0.31
VTI1BP2-201ENST00000394154 RPUSD2Q8IZ73 545 aaKnown RBP13.11□□□□□ -0.31
VTI1BP2-201ENST00000394154 SPATA5Q8NB90 893 aa13.11□□□□□ -0.31
VTI1BP2-201ENST00000394154 C22orf23Q9BZE7 217 aa13.11□□□□□ -0.31
VTI1BP2-201ENST00000394154 TANGO6Q9C0B7 1094 aa13.11□□□□□ -0.31
VTI1BP2-201ENST00000394154 HIPK3Q9H422 1215 aa13.11□□□□□ -0.31
VTI1BP2-201ENST00000394154 SAP30BPQ9UHR5 308 aaKnown RBP13.11□□□□□ -0.31
VTI1BP2-201ENST00000394154 FAM184BQ9ULE4 1060 aa13.11□□□□□ -0.31
VTI1BP2-201ENST00000394154 EPOPA6NHQ4 379 aa13.1□□□□□ -0.31
VTI1BP2-201ENST00000394154 ZBBXA8MT70 800 aa13.1□□□□□ -0.31
VTI1BP2-201ENST00000394154 DUSP11O75319 330 aaKnown RBP13.1□□□□□ -0.31
VTI1BP2-201ENST00000394154 SLC25A27O95847 323 aa13.1□□□□□ -0.31
VTI1BP2-201ENST00000394154 CD4P01730 458 aa13.1□□□□□ -0.31
VTI1BP2-201ENST00000394154 ASGR1P07306 291 aa13.1□□□□□ -0.31
VTI1BP2-201ENST00000394154 ZFYP08048 801 aaPredicted RBP13.1□□□□□ -0.31
VTI1BP2-201ENST00000394154 ATXN8OSP0DMR3 200 aa13.1□□□□□ -0.31
VTI1BP2-201ENST00000394154 SSTR3P32745 418 aaPredicted RBP13.1□□□□□ -0.31
VTI1BP2-201ENST00000394154 PPP4CP60510 307 aa13.1□□□□□ -0.31
VTI1BP2-201ENST00000394154 ZSCAN25Q6NSZ9 544 aa13.1□□□□□ -0.31
VTI1BP2-201ENST00000394154 TBC1D32Q96NH3 1257 aa13.1□□□□□ -0.31
VTI1BP2-201ENST00000394154 MMP19Q99542 508 aa13.1□□□□□ -0.31
VTI1BP2-201ENST00000394154 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.1□□□□□ -0.31
VTI1BP2-201ENST00000394154 CERS4Q9HA82 394 aa13.1□□□□□ -0.31
VTI1BP2-201ENST00000394154 LRP2BPQ9P2M1 347 aa13.1□□□□□ -0.31
VTI1BP2-201ENST00000394154 MYADML2A6NDP7 307 aa13.09□□□□□ -0.31
VTI1BP2-201ENST00000394154 RNF113AO15541 343 aaKnown RBP13.09□□□□□ -0.31
VTI1BP2-201ENST00000394154 SGSM2O43147 1006 aa13.09□□□□□ -0.31
VTI1BP2-201ENST00000394154 EPB41L2O43491 1005 aaKnown RBP13.09□□□□□ -0.31
VTI1BP2-201ENST00000394154 C6orf222P0C671 652 aaPredicted RBP13.09□□□□□ -0.31
VTI1BP2-201ENST00000394154 NMIQ13287 307 aaPredicted RBP13.09□□□□□ -0.31
VTI1BP2-201ENST00000394154 ABCB5Q2M3G0 1257 aa13.09□□□□□ -0.31
VTI1BP2-201ENST00000394154 ZNF792Q3KQV3 632 aa13.09□□□□□ -0.31
VTI1BP2-201ENST00000394154 NAA16Q6N069 864 aaPredicted RBP13.09□□□□□ -0.31
VTI1BP2-201ENST00000394154 PI16Q6UXB8 463 aa13.09□□□□□ -0.31
VTI1BP2-201ENST00000394154 MSL3Q8N5Y2 521 aaKnown RBP13.09□□□□□ -0.31
VTI1BP2-201ENST00000394154 ARNTL2Q8WYA1 636 aa13.09□□□□□ -0.31
VTI1BP2-201ENST00000394154 USP26Q9BXU7 913 aa13.09□□□□□ -0.31
VTI1BP2-201ENST00000394154 SPC25Q9HBM1 224 aa13.09□□□□□ -0.31
VTI1BP2-201ENST00000394154 CABP5Q9NP86 173 aa13.09□□□□□ -0.31
VTI1BP2-201ENST00000394154 RAD50Q92878 1312 aa13.09□□□□□ -0.31
VTI1BP2-201ENST00000394154 CFAP54Q96N23 3096 aa13.09□□□□□ -0.31
VTI1BP2-201ENST00000394154 MYH1P12882 1939 aa13.08□□□□□ -0.32
VTI1BP2-201ENST00000394154 ZNF318Q5VUA4 2279 aa13.08□□□□□ -0.32
VTI1BP2-201ENST00000394154 DCXO43602 365 aa13.08□□□□□ -0.32
VTI1BP2-201ENST00000394154 CYP2E1P05181 493 aaPredicted RBP13.08□□□□□ -0.32
VTI1BP2-201ENST00000394154 PGK2P07205 417 aa13.08□□□□□ -0.32
VTI1BP2-201ENST00000394154 KCTD2Q14681 263 aa13.08□□□□□ -0.32
VTI1BP2-201ENST00000394154 CERKLQ49MI3 558 aaPredicted RBP13.08□□□□□ -0.32
VTI1BP2-201ENST00000394154 EHD4Q9H223 541 aa13.08□□□□□ -0.32
VTI1BP2-201ENST00000394154 ANTXR1Q9H6X2 564 aa13.08□□□□□ -0.32
VTI1BP2-201ENST00000394154 ANO2Q9NQ90 1003 aa13.08□□□□□ -0.32
VTI1BP2-201ENST00000394154 HELLSQ9NRZ9 838 aa13.08□□□□□ -0.32
VTI1BP2-201ENST00000394154 SERPINB13Q9UIV8 391 aa13.08□□□□□ -0.32
VTI1BP2-201ENST00000394154 USP34Q70CQ2 3546 aa13.08□□□□□ -0.32
VTI1BP2-201ENST00000394154 COL4A4P53420 1690 aaPredicted RBP13.08□□□□□ -0.32
VTI1BP2-201ENST00000394154 UMODL1Q5DID0 1318 aa13.08□□□□□ -0.32
VTI1BP2-201ENST00000394154 MYO5AQ9Y4I1 1855 aaKnown RBP13.08□□□□□ -0.32
VTI1BP2-201ENST00000394154 PFKMP08237 780 aa13.07□□□□□ -0.32
VTI1BP2-201ENST00000394154 MCCP23508 829 aa13.07□□□□□ -0.32
VTI1BP2-201ENST00000394154 RBM25P49756 843 aaKnown RBP13.07□□□□□ -0.32
VTI1BP2-201ENST00000394154 CCL23P55773 120 aa13.07□□□□□ -0.32
VTI1BP2-201ENST00000394154 GRB10Q13322 594 aa13.07□□□□□ -0.32
VTI1BP2-201ENST00000394154 LEXMQ3ZCV2 418 aa13.07□□□□□ -0.32
VTI1BP2-201ENST00000394154 MCMDC2Q4G0Z9 681 aa13.07□□□□□ -0.32
VTI1BP2-201ENST00000394154 FAM227BQ96M60 508 aa13.07□□□□□ -0.32
VTI1BP2-201ENST00000394154 UBE2ZQ9H832 354 aaPredicted RBP13.07□□□□□ -0.32
VTI1BP2-201ENST00000394154 LMCD1Q9NZU5 365 aa13.07□□□□□ -0.32
VTI1BP2-201ENST00000394154 BRWD1Q9NSI6 2320 aa13.06□□□□□ -0.32
VTI1BP2-201ENST00000394154 A0A0D9SFI3 127 aa13.06□□□□□ -0.32
VTI1BP2-201ENST00000394154 IDH1O75874 414 aaKnown RBP13.06□□□□□ -0.32
VTI1BP2-201ENST00000394154 TAP1Q03518 808 aa13.06□□□□□ -0.32
VTI1BP2-201ENST00000394154 GNASQ5JWF2 1037 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms