RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 TATDN1Q6P1N9 297 aa12.47□□□□□ -0.41
CASP3-202ENST00000393585 KRT25Q7Z3Z0 450 aa12.47□□□□□ -0.41
CASP3-202ENST00000393585 REXO1Q8N1G1 1221 aaKnown RBP12.47□□□□□ -0.41
CASP3-202ENST00000393585 SLC16A10Q8TF71 515 aa12.47□□□□□ -0.41
CASP3-202ENST00000393585 CSRNP1Q96S65 589 aa12.47□□□□□ -0.41
CASP3-202ENST00000393585 IFNKQ9P0W0 207 aa12.47□□□□□ -0.41
CASP3-202ENST00000393585 USP17L10C9JJH3 530 aa12.46□□□□□ -0.41
CASP3-202ENST00000393585 CCNT1O60563 726 aaKnown RBP12.46□□□□□ -0.41
CASP3-202ENST00000393585 PPP1R11O60927 126 aaPredicted RBP12.46□□□□□ -0.41
CASP3-202ENST00000393585 JAG1P78504 1218 aa12.46□□□□□ -0.41
CASP3-202ENST00000393585 ICA1Q05084 483 aa12.46□□□□□ -0.41
CASP3-202ENST00000393585 MORC3Q14149 939 aa12.46□□□□□ -0.41
CASP3-202ENST00000393585 E2F4Q16254 413 aa12.46□□□□□ -0.41
CASP3-202ENST00000393585 HSP90AA4PQ58FG1 418 aa12.46□□□□□ -0.41
CASP3-202ENST00000393585 SH3RF1Q7Z6J0 888 aa12.46□□□□□ -0.41
CASP3-202ENST00000393585 FILIP1Q7Z7B0 1213 aa12.46□□□□□ -0.41
CASP3-202ENST00000393585 TBCKQ8TEA7 893 aa12.46□□□□□ -0.41
CASP3-202ENST00000393585 XPO4Q9C0E2 1151 aaKnown RBP12.46□□□□□ -0.41
CASP3-202ENST00000393585 PSME4Q14997 1843 aa12.46□□□□□ -0.41
CASP3-202ENST00000393585 SPDYE2BA6NHP3 402 aa12.46□□□□□ -0.42
CASP3-202ENST00000393585 TPM3P06753 285 aa12.46□□□□□ -0.42
CASP3-202ENST00000393585 SPDYE6P0CI01 402 aa12.46□□□□□ -0.42
CASP3-202ENST00000393585 TPM4P67936 248 aa12.46□□□□□ -0.42
CASP3-202ENST00000393585 RRP1BQ14684 758 aaKnown RBP12.46□□□□□ -0.42
CASP3-202ENST00000393585 ARID5BQ14865 1188 aa12.46□□□□□ -0.42
CASP3-202ENST00000393585 KARSQ15046 597 aaKnown RBP12.46□□□□□ -0.42
CASP3-202ENST00000393585 GPATCH4Q5T3I0 446 aaKnown RBP12.46□□□□□ -0.42
CASP3-202ENST00000393585 DTHD1Q6ZMT9 781 aa12.46□□□□□ -0.42
CASP3-202ENST00000393585 SIAH1Q8IUQ4 282 aa12.46□□□□□ -0.42
CASP3-202ENST00000393585 SPATA20Q8TB22 786 aa12.46□□□□□ -0.42
CASP3-202ENST00000393585 KANSL2Q9H9L4 492 aa12.46□□□□□ -0.42
CASP3-202ENST00000393585 ENTPD3O75355 529 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 VIL1P09327 827 aaKnown RBP12.45□□□□□ -0.42
CASP3-202ENST00000393585 LONP1P36776 959 aaKnown RBP12.45□□□□□ -0.42
CASP3-202ENST00000393585 SLC1A4P43007 532 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 FMR1Q06787 632 aaKnown RBP eCLIP12.45□□□□□ -0.42
CASP3-202ENST00000393585 ABCB5Q2M3G0 1257 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 NEK8Q86SG6 692 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 TRMT44Q8IYL2 757 aaKnown RBP12.45□□□□□ -0.42
CASP3-202ENST00000393585 FAM177A1Q8N128 213 aaPredicted RBP12.45□□□□□ -0.42
CASP3-202ENST00000393585 IQUBQ8NA54 791 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 GMLQ99445 158 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 BLZF1Q9H2G9 400 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 PPP1R1BQ9UD71 204 aaPredicted RBP12.45□□□□□ -0.42
CASP3-202ENST00000393585 PNMA6FA0A0J9YX94 578 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 ESYT2A0FGR8 921 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 OFD1O75665 1012 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 GH2P01242 217 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 ADCY7P51828 1080 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 DLGAP5Q15398 846 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 UBE2SQ16763 222 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 SLFN13Q68D06 897 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 FBXO41Q8TF61 875 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 CACTINQ8WUQ7 758 aaKnown RBP12.45□□□□□ -0.42
CASP3-202ENST00000393585 CCDC34Q96HJ3 373 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 MTRQ99707 1265 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 FANCLQ9NW38 375 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 NYAP2Q9P242 653 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 ATRNL1Q5VV63 1379 aa12.45□□□□□ -0.42
CASP3-202ENST00000393585 FANCCQ00597 558 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 DPYDQ12882 1025 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 NOLC1Q14978 699 aaKnown RBP eCLIP12.44□□□□□ -0.42
CASP3-202ENST00000393585 GRIPAP1Q4V328 841 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 PDXDC2PQ6P474 469 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 TMEM179Q6ZVK1 233 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 OGFOD1Q8N543 542 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 PLIN2Q99541 437 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 NUP88Q99567 741 aaPredicted RBP12.44□□□□□ -0.42
CASP3-202ENST00000393585 VEZTQ9HBM0 779 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 TMOD2Q9NZR1 351 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 hCG_1984214I3L0E3 225 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 ZBTB5O15062 677 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 NEMFO60524 1076 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 CDAN1Q8IWY9 1227 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 NIM1KQ8IY84 436 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 SMYD4Q8IYR2 804 aaPredicted RBP12.44□□□□□ -0.42
CASP3-202ENST00000393585 ZNF713Q8N859 430 aaPredicted RBP12.44□□□□□ -0.42
CASP3-202ENST00000393585 TRIML1Q8N9V2 468 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 MLKLQ8NB16 471 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 RASSF8Q8NHQ8 419 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 KIAA1524Q8TCG1 905 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 MKL1Q969V6 931 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 NAP1L5Q96NT1 182 aaPredicted RBP12.44□□□□□ -0.42
CASP3-202ENST00000393585 ZNF70Q9UC06 446 aaPredicted RBP12.44□□□□□ -0.42
CASP3-202ENST00000393585 HDAC9Q9UKV0 1011 aa12.44□□□□□ -0.42
CASP3-202ENST00000393585 TXLNAP40222 546 aa12.43□□□□□ -0.42
CASP3-202ENST00000393585 CUL4BQ13620 913 aa12.43□□□□□ -0.42
CASP3-202ENST00000393585 PPP4R3BQ5MIZ7 849 aa12.43□□□□□ -0.42
CASP3-202ENST00000393585 DPF2Q92785 391 aa12.43□□□□□ -0.42
CASP3-202ENST00000393585 MED15Q96RN5 788 aa12.43□□□□□ -0.42
CASP3-202ENST00000393585 PIM2Q9P1W9 311 aa12.43□□□□□ -0.42
CASP3-202ENST00000393585 OR52Z1P0C646 297 aa12.43□□□□□ -0.42
CASP3-202ENST00000393585 TNNI2P48788 182 aa12.43□□□□□ -0.42
CASP3-202ENST00000393585 SNAP25P60880 206 aa12.43□□□□□ -0.42
CASP3-202ENST00000393585 PTPN21Q16825 1174 aa12.43□□□□□ -0.42
CASP3-202ENST00000393585 KLHL10Q6JEL2 608 aa12.43□□□□□ -0.42
CASP3-202ENST00000393585 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.43□□□□□ -0.42
CASP3-202ENST00000393585 DISC1Q9NRI5 854 aa12.43□□□□□ -0.42
CASP3-202ENST00000393585 ZNRF3Q9ULT6 936 aa12.43□□□□□ -0.42
CASP3-202ENST00000393585 SCAF8Q9UPN6 1271 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms