RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 RWDD1Q9H446 243 aaPredicted RBP21.61■■□□□ 1.05
PDLIM7-205ENST00000393551 HOMER2Q9NSB8 354 aa21.61■■□□□ 1.05
PDLIM7-205ENST00000393551 CNPY2Q9Y2B0 182 aa21.61■■□□□ 1.05
PDLIM7-205ENST00000393551 CTDP1Q9Y5B0 961 aaPredicted RBP21.61■■□□□ 1.05
PDLIM7-205ENST00000393551 FDX1P10109 184 aa21.6■■□□□ 1.05
PDLIM7-205ENST00000393551 NUCB1Q02818 461 aa21.6■■□□□ 1.05
PDLIM7-205ENST00000393551 FAM160B2Q86V87 743 aa21.6■■□□□ 1.05
PDLIM7-205ENST00000393551 ANKRD35Q8N283 1001 aa21.6■■□□□ 1.05
PDLIM7-205ENST00000393551 CHURC1Q8WUH1 139 aa21.6■■□□□ 1.05
PDLIM7-205ENST00000393551 OSBPL3Q9H4L5 887 aa21.6■■□□□ 1.05
PDLIM7-205ENST00000393551 FBXO40Q9UH90 709 aa21.6■■□□□ 1.05
PDLIM7-205ENST00000393551 LCTP09848 1927 aa21.6■■□□□ 1.05
PDLIM7-205ENST00000393551 A0A0C4DFX4 3053 aa21.59■■□□□ 1.05
PDLIM7-205ENST00000393551 ZMYM6O95789 1325 aa21.59■■□□□ 1.05
PDLIM7-205ENST00000393551 TRIM6-TRIM34B2RNG4 842 aa21.59■■□□□ 1.05
PDLIM7-205ENST00000393551 IRX5P78411 483 aaPredicted RBP21.59■■□□□ 1.05
PDLIM7-205ENST00000393551 CNTN2Q02246 1040 aa21.59■■□□□ 1.05
PDLIM7-205ENST00000393551 SH3RF1Q7Z6J0 888 aa21.59■■□□□ 1.05
PDLIM7-205ENST00000393551 FAM133AQ8N9E0 248 aa21.59■■□□□ 1.05
PDLIM7-205ENST00000393551 RILPL2Q969X0 211 aa21.59■■□□□ 1.05
PDLIM7-205ENST00000393551 KATNBL1Q9H079 304 aa21.59■■□□□ 1.05
PDLIM7-205ENST00000393551 A1CFQ9NQ94 594 aaKnown RBP21.59■■□□□ 1.05
PDLIM7-205ENST00000393551 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.59■■□□□ 1.05
PDLIM7-205ENST00000393551 PRR12Q9ULL5 1215 aa21.59■■□□□ 1.05
PDLIM7-205ENST00000393551 ISY1Q9ULR0 285 aaKnown RBP21.59■■□□□ 1.05
PDLIM7-205ENST00000393551 CCDC171Q6TFL3 1326 aa21.58■■□□□ 1.05
PDLIM7-205ENST00000393551 SYNRGQ9UMZ2 1314 aa21.58■■□□□ 1.05
PDLIM7-205ENST00000393551 MYADML2A6NDP7 307 aa21.58■■□□□ 1.05
PDLIM7-205ENST00000393551 SDSP20132 328 aa21.58■■□□□ 1.05
PDLIM7-205ENST00000393551 HAND2P61296 217 aa21.58■■□□□ 1.05
PDLIM7-205ENST00000393551 ACVR2BQ13705 512 aa21.58■■□□□ 1.05
PDLIM7-205ENST00000393551 PPP4R3BQ5MIZ7 849 aa21.58■■□□□ 1.05
PDLIM7-205ENST00000393551 CCSAPQ6IQ19 270 aaPredicted RBP21.58■■□□□ 1.05
PDLIM7-205ENST00000393551 RNF180Q86T96 592 aa21.58■■□□□ 1.05
PDLIM7-205ENST00000393551 KLHDC9Q8NEP7 349 aa21.58■■□□□ 1.05
PDLIM7-205ENST00000393551 ACAD9Q9H845 621 aa21.58■■□□□ 1.05
PDLIM7-205ENST00000393551 PDLIM7Q9NR12 457 aa21.58■■□□□ 1.05
PDLIM7-205ENST00000393551 ZHX1Q9UKY1 873 aaPredicted RBP21.58■■□□□ 1.05
PDLIM7-205ENST00000393551 MTMR7Q9Y216 660 aa21.58■■□□□ 1.05
PDLIM7-205ENST00000393551 ASTN1O14525 1302 aa21.57■■□□□ 1.04
PDLIM7-205ENST00000393551 A0A1W2PQ45 241 aaPredicted RBP21.57■■□□□ 1.04
PDLIM7-205ENST00000393551 A0A1W2PQY0 241 aa21.57■■□□□ 1.04
PDLIM7-205ENST00000393551 TRIM43BA6NCK2 446 aa21.57■■□□□ 1.04
PDLIM7-205ENST00000393551 TLE2Q04725 743 aa21.57■■□□□ 1.04
PDLIM7-205ENST00000393551 MUM1L1Q5H9M0 696 aa21.57■■□□□ 1.04
PDLIM7-205ENST00000393551 RRP12Q5JTH9 1297 aaKnown RBP21.57■■□□□ 1.04
PDLIM7-205ENST00000393551 TTBK2Q6IQ55 1244 aa21.57■■□□□ 1.04
PDLIM7-205ENST00000393551 GPR153Q6NV75 609 aa21.57■■□□□ 1.04
PDLIM7-205ENST00000393551 CCDC174Q6PII3 467 aa21.57■■□□□ 1.04
PDLIM7-205ENST00000393551 ARMCX2Q7L311 632 aa21.57■■□□□ 1.04
PDLIM7-205ENST00000393551 TBC1D10CQ8IV04 446 aa21.57■■□□□ 1.04
PDLIM7-205ENST00000393551 CCDC144CPQ8IYA2 1237 aa21.57■■□□□ 1.04
PDLIM7-205ENST00000393551 TRIM43Q96BQ3 446 aaPredicted RBP21.57■■□□□ 1.04
PDLIM7-205ENST00000393551 TMEM47Q9BQJ4 181 aa21.57■■□□□ 1.04
PDLIM7-205ENST00000393551 RNF146Q9NTX7 359 aa21.57■■□□□ 1.04
PDLIM7-205ENST00000393551 FAM184BQ9ULE4 1060 aa21.57■■□□□ 1.04
PDLIM7-205ENST00000393551 SOWAHBA6NEL2 793 aa21.56■■□□□ 1.04
PDLIM7-205ENST00000393551 ITGB8P26012 769 aa21.56■■□□□ 1.04
PDLIM7-205ENST00000393551 IKQ13123 557 aaPredicted RBP21.56■■□□□ 1.04
PDLIM7-205ENST00000393551 CCDC144BQ3MJ40 725 aa21.56■■□□□ 1.04
PDLIM7-205ENST00000393551 Q7L0L9 218 aa21.56■■□□□ 1.04
PDLIM7-205ENST00000393551 TRERF1Q96PN7 1200 aa21.56■■□□□ 1.04
PDLIM7-205ENST00000393551 LBHD1Q9BQE6 289 aaPredicted RBP21.56■■□□□ 1.04
PDLIM7-205ENST00000393551 ABHD16BQ9H3Z7 469 aa21.56■■□□□ 1.04
PDLIM7-205ENST00000393551 TOMM22Q9NS69 142 aa21.56■■□□□ 1.04
PDLIM7-205ENST00000393551 TCP11L1Q9NUJ3 509 aa21.56■■□□□ 1.04
PDLIM7-205ENST00000393551 DDX49Q9Y6V7 483 aaKnown RBP21.56■■□□□ 1.04
PDLIM7-205ENST00000393551 LRRC37A2A6NM11 1700 aa21.55■■□□□ 1.04
PDLIM7-205ENST00000393551 CDH23Q9H251 3354 aa21.55■■□□□ 1.04
PDLIM7-205ENST00000393551 DUSP11O75319 330 aaKnown RBP21.55■■□□□ 1.04
PDLIM7-205ENST00000393551 ALAS1P13196 640 aa21.55■■□□□ 1.04
PDLIM7-205ENST00000393551 SLC16A2P36021 539 aa21.55■■□□□ 1.04
PDLIM7-205ENST00000393551 BTNL9Q6UXG8 535 aa21.55■■□□□ 1.04
PDLIM7-205ENST00000393551 DCAF4Q8WV16 495 aa21.55■■□□□ 1.04
PDLIM7-205ENST00000393551 BADQ92934 168 aa21.55■■□□□ 1.04
PDLIM7-205ENST00000393551 PRDM5Q9NQX1 630 aaPredicted RBP21.55■■□□□ 1.04
PDLIM7-205ENST00000393551 PRKAG2Q9UGJ0 569 aa21.55■■□□□ 1.04
PDLIM7-205ENST00000393551 LAMA4Q16363 1823 aa21.55■■□□□ 1.04
PDLIM7-205ENST00000393551 TOP1P11387 765 aaKnown RBP21.54■■□□□ 1.04
PDLIM7-205ENST00000393551 ACLYP53396 1101 aa21.54■■□□□ 1.04
PDLIM7-205ENST00000393551 KCNA10Q16322 511 aa21.54■■□□□ 1.04
PDLIM7-205ENST00000393551 TKFCQ3LXA3 575 aa21.54■■□□□ 1.04
PDLIM7-205ENST00000393551 AKNAD1Q5T1N1 836 aa21.54■■□□□ 1.04
PDLIM7-205ENST00000393551 TSEN34Q9BSV6 310 aaKnown RBP21.54■■□□□ 1.04
PDLIM7-205ENST00000393551 RANBP17Q9H2T7 1088 aaKnown RBP21.54■■□□□ 1.04
PDLIM7-205ENST00000393551 POTEB2H3BUK9 544 aa21.53■■□□□ 1.04
PDLIM7-205ENST00000393551 CTAGE5O15320 804 aa21.53■■□□□ 1.04
PDLIM7-205ENST00000393551 CCDC96Q2M329 555 aa21.53■■□□□ 1.04
PDLIM7-205ENST00000393551 DEFB123Q8N688 67 aa21.53■■□□□ 1.04
PDLIM7-205ENST00000393551 PURBQ96QR8 312 aaKnown RBP21.53■■□□□ 1.04
PDLIM7-205ENST00000393551 NEDD4P46934 1319 aa21.53■■□□□ 1.04
PDLIM7-205ENST00000393551 FRMPD2Q68DX3 1309 aaPredicted RBP21.53■■□□□ 1.04
PDLIM7-205ENST00000393551 EYSQ5T1H1 3165 aa21.52■■□□□ 1.04
PDLIM7-205ENST00000393551 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.52■■□□□ 1.04
PDLIM7-205ENST00000393551 ICAM1P05362 532 aa21.52■■□□□ 1.04
PDLIM7-205ENST00000393551 CST5P28325 142 aaPredicted RBP21.52■■□□□ 1.04
PDLIM7-205ENST00000393551 C9orf50Q5SZB4 431 aa21.52■■□□□ 1.04
PDLIM7-205ENST00000393551 CWC27Q6UX04 472 aaKnown RBP21.52■■□□□ 1.04
PDLIM7-205ENST00000393551 MFSD6Q6ZSS7 791 aa21.52■■□□□ 1.04
PDLIM7-205ENST00000393551 UPF3AQ9H1J1 476 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms