RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 HLA-DOAP06340 250 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 IGFBP4P22692 258 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 USP17L24Q0WX57 530 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 TRIM60Q495X7 471 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 RNF20Q5VTR2 975 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 RNF180Q86T96 592 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 FOXP4Q8IVH2 680 aaPredicted RBP9.66□□□□□ -0.86
CASP4-201ENST00000393150 TEX11Q8IYF3 940 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 KLHDC4Q8TBB5 520 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 USP6NLQ92738 828 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 PRKD2Q9BZL6 878 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 TMEM39AQ9NV64 488 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.66□□□□□ -0.86
CASP4-201ENST00000393150 RBPJLQ9UBG7 517 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 AKAP2Q9Y2D5 859 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 LAMA2P24043 3122 aaKnown RBP9.66□□□□□ -0.86
CASP4-201ENST00000393150 A0A1B0GUL6 1792 aa9.66□□□□□ -0.86
CASP4-201ENST00000393150 FAM196BA6NMK8 535 aa9.65□□□□□ -0.86
CASP4-201ENST00000393150 SEPT4O43236 478 aa9.65□□□□□ -0.86
CASP4-201ENST00000393150 CIAO1O76071 339 aa9.65□□□□□ -0.86
CASP4-201ENST00000393150 CLTBP09497 229 aa9.65□□□□□ -0.86
CASP4-201ENST00000393150 IL15P40933 162 aaPredicted RBP9.65□□□□□ -0.86
CASP4-201ENST00000393150 MVPQ14764 893 aaKnown RBP9.65□□□□□ -0.86
CASP4-201ENST00000393150 PRUNE2Q8WUY3 3088 aa9.65□□□□□ -0.86
CASP4-201ENST00000393150 SIL1Q9H173 461 aa9.65□□□□□ -0.86
CASP4-201ENST00000393150 PORCNQ9H237 461 aa9.65□□□□□ -0.86
CASP4-201ENST00000393150 TXNRD2Q9NNW7 524 aa9.65□□□□□ -0.86
CASP4-201ENST00000393150 DDX4Q9NQI0 724 aaKnown RBP9.65□□□□□ -0.86
CASP4-201ENST00000393150 RAI14Q9P0K7 980 aa9.65□□□□□ -0.86
CASP4-201ENST00000393150 RAPGEFL1Q9UHV5 662 aa9.65□□□□□ -0.86
CASP4-201ENST00000393150 DOLKQ9UPQ8 538 aa9.65□□□□□ -0.86
CASP4-201ENST00000393150 V9GY48 417 aaPredicted RBP9.65□□□□□ -0.86
CASP4-201ENST00000393150 DOCK1Q14185 1865 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 HOXC6P09630 235 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 RARBP10826 455 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 CYP2C19P33261 490 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 ADCYAP1R1P41586 468 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 PHKA1P46020 1223 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 MECOMQ03112 1051 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 TLE2Q04725 743 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 PPIGQ13427 754 aaKnown RBP eCLIP9.64□□□□□ -0.87
CASP4-201ENST00000393150 RAB30Q15771 203 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 C1orf53Q5VUE5 145 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 CCDC102BQ68D86 513 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 NUP133Q8WUM0 1156 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 FERMT2Q96AC1 680 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 KAZALD1Q96I82 304 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 PRKRIP1Q9H875 184 aaPredicted RBP9.64□□□□□ -0.87
CASP4-201ENST00000393150 PDLIM7Q9NR12 457 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 HOXC10Q9NYD6 342 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 LRP2BPQ9P2M1 347 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 DOCK2Q92608 1830 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 MYO9BQ13459 2157 aa9.64□□□□□ -0.87
CASP4-201ENST00000393150 PDS5AQ29RF7 1337 aaKnown RBP9.64□□□□□ -0.87
CASP4-201ENST00000393150 ERVH48-1M5A8F1 160 aa9.63□□□□□ -0.87
CASP4-201ENST00000393150 PQBP1O60828 265 aaKnown RBP9.63□□□□□ -0.87
CASP4-201ENST00000393150 ARID5BQ14865 1188 aa9.63□□□□□ -0.87
CASP4-201ENST00000393150 EML3Q32P44 896 aa9.63□□□□□ -0.87
CASP4-201ENST00000393150 CRTC2Q53ET0 693 aaPredicted RBP9.63□□□□□ -0.87
CASP4-201ENST00000393150 OLFML2BQ68BL8 750 aa9.63□□□□□ -0.87
CASP4-201ENST00000393150 ANKRD44Q8N8A2 993 aa9.63□□□□□ -0.87
CASP4-201ENST00000393150 SLC44A5Q8NCS7 719 aa9.63□□□□□ -0.87
CASP4-201ENST00000393150 CABP5Q9NP86 173 aa9.63□□□□□ -0.87
CASP4-201ENST00000393150 ZMIZ1Q9ULJ6 1067 aa9.63□□□□□ -0.87
CASP4-201ENST00000393150 GDF9O60383 454 aa9.62□□□□□ -0.87
CASP4-201ENST00000393150 DKK1O94907 266 aa9.62□□□□□ -0.87
CASP4-201ENST00000393150 UBTFL1P0CB47 393 aaPredicted RBP9.62□□□□□ -0.87
CASP4-201ENST00000393150 RAB15P59190 212 aa9.62□□□□□ -0.87
CASP4-201ENST00000393150 CLDN10P78369 228 aa9.62□□□□□ -0.87
CASP4-201ENST00000393150 PTK7Q13308 1070 aa9.62□□□□□ -0.87
CASP4-201ENST00000393150 ELOAQ14241 798 aaKnown RBP9.62□□□□□ -0.87
CASP4-201ENST00000393150 GRB14Q14449 540 aa9.62□□□□□ -0.87
CASP4-201ENST00000393150 CCDC85BQ15834 202 aaPredicted RBP9.62□□□□□ -0.87
CASP4-201ENST00000393150 OXLD1Q5BKU9 147 aa9.62□□□□□ -0.87
CASP4-201ENST00000393150 TMEM31Q5JXX7 168 aa9.62□□□□□ -0.87
CASP4-201ENST00000393150 TMEM199Q8N511 208 aa9.62□□□□□ -0.87
CASP4-201ENST00000393150 USP38Q8NB14 1042 aa9.62□□□□□ -0.87
CASP4-201ENST00000393150 VTI1AQ96AJ9 217 aa9.62□□□□□ -0.87
CASP4-201ENST00000393150 SLC28A3Q9HAS3 691 aa9.62□□□□□ -0.87
CASP4-201ENST00000393150 XPNPEP3Q9NQH7 507 aa9.62□□□□□ -0.87
CASP4-201ENST00000393150 PCDHB11Q9Y5F2 797 aa9.62□□□□□ -0.87
CASP4-201ENST00000393150 PTPRCP08575 1304 aa9.62□□□□□ -0.87
CASP4-201ENST00000393150 MROH7Q68CQ1 1323 aa9.62□□□□□ -0.87
CASP4-201ENST00000393150 PTPRFP10586 1907 aa9.62□□□□□ -0.87
CASP4-201ENST00000393150 TRIM43BA6NCK2 446 aa9.61□□□□□ -0.87
CASP4-201ENST00000393150 KIAA0355O15063 1070 aa9.61□□□□□ -0.87
CASP4-201ENST00000393150 ADH1CP00326 375 aa9.61□□□□□ -0.87
CASP4-201ENST00000393150 NR3C2P08235 984 aa9.61□□□□□ -0.87
CASP4-201ENST00000393150 FSHRP23945 695 aa9.61□□□□□ -0.87
CASP4-201ENST00000393150 RHBDL3P58872 404 aa9.61□□□□□ -0.87
CASP4-201ENST00000393150 RASGRF1Q13972 1273 aa9.61□□□□□ -0.87
CASP4-201ENST00000393150 SNX17Q15036 470 aa9.61□□□□□ -0.87
CASP4-201ENST00000393150 RAB3GAP1Q15042 981 aa9.61□□□□□ -0.87
CASP4-201ENST00000393150 LRRC41Q15345 812 aa9.61□□□□□ -0.87
CASP4-201ENST00000393150 ANO1Q5XXA6 986 aa9.61□□□□□ -0.87
CASP4-201ENST00000393150 TRIM43Q96BQ3 446 aaPredicted RBP9.61□□□□□ -0.87
CASP4-201ENST00000393150 NEUROD6Q96NK8 337 aa9.61□□□□□ -0.87
CASP4-201ENST00000393150 TRAIPQ9BWF2 469 aa9.61□□□□□ -0.87
CASP4-201ENST00000393150 PRDM12Q9H4Q4 367 aa9.61□□□□□ -0.87
CASP4-201ENST00000393150 SPC25Q9HBM1 224 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms