RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 AFDNP55196 1824 aaKnown RBP11.77□□□□□ -0.52
CALD1-203ENST00000393118 TRIM49BA6NDI0 452 aa11.77□□□□□ -0.52
CALD1-203ENST00000393118 ATP2B4P23634 1241 aa11.77□□□□□ -0.52
CALD1-203ENST00000393118 SLC16A2P36021 539 aa11.77□□□□□ -0.52
CALD1-203ENST00000393118 CDK8P49336 464 aa11.77□□□□□ -0.52
CALD1-203ENST00000393118 CHMP4BP1P59074 171 aa11.77□□□□□ -0.52
CALD1-203ENST00000393118 MTF1Q14872 753 aa11.77□□□□□ -0.52
CALD1-203ENST00000393118 EARS2Q5JPH6 523 aaKnown RBP11.77□□□□□ -0.52
CALD1-203ENST00000393118 PTF1AQ7RTS3 328 aa11.77□□□□□ -0.52
CALD1-203ENST00000393118 NBPF11Q86T75 865 aa11.77□□□□□ -0.52
CALD1-203ENST00000393118 TMTC1Q8IUR5 882 aa11.77□□□□□ -0.52
CALD1-203ENST00000393118 ACRBPQ8NEB7 543 aa11.77□□□□□ -0.52
CALD1-203ENST00000393118 PHF20Q9BVI0 1012 aa11.77□□□□□ -0.52
CALD1-203ENST00000393118 FAM207AQ9NSI2 230 aaPredicted RBP11.77□□□□□ -0.52
CALD1-203ENST00000393118 HPSEQ9Y251 543 aa11.77□□□□□ -0.52
CALD1-203ENST00000393118 MRC1P22897 1456 aa11.77□□□□□ -0.53
CALD1-203ENST00000393118 TRAF5O00463 557 aa11.77□□□□□ -0.53
CALD1-203ENST00000393118 MAP2K2P36507 400 aa11.77□□□□□ -0.53
CALD1-203ENST00000393118 NCAPHQ15003 741 aa11.77□□□□□ -0.53
CALD1-203ENST00000393118 ANKRD7Q92527 254 aa11.77□□□□□ -0.53
CALD1-203ENST00000393118 TRIM37O94972 964 aa11.77□□□□□ -0.53
CALD1-203ENST00000393118 MRPL12P52815 198 aaKnown RBP11.77□□□□□ -0.53
CALD1-203ENST00000393118 FBXO33Q7Z6M2 555 aa11.77□□□□□ -0.53
CALD1-203ENST00000393118 DGKHQ86XP1 1220 aa11.77□□□□□ -0.53
CALD1-203ENST00000393118 TBCKQ8TEA7 893 aa11.77□□□□□ -0.53
CALD1-203ENST00000393118 MTA3Q9BTC8 594 aa11.77□□□□□ -0.53
CALD1-203ENST00000393118 LUC7LQ9NQ29 371 aaKnown RBP11.77□□□□□ -0.53
CALD1-203ENST00000393118 TNS2Q63HR2 1409 aa11.77□□□□□ -0.53
CALD1-203ENST00000393118 SPATA31A5Q5VU36 1347 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 SPATA31A7Q8IWB4 1347 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 KDM4FA0A1W2PPD8 638 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 KIF5AQ12840 1032 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 TBC1D22AQ8WUA7 517 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 LZTS2Q9BRK4 669 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 IRX2Q9BZI1 471 aaPredicted RBP11.76□□□□□ -0.53
CALD1-203ENST00000393118 EPC1Q9H2F5 836 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 KRT86O43790 486 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 SEC31AO94979 1220 aaKnown RBP11.76□□□□□ -0.53
CALD1-203ENST00000393118 SLC1A4P43007 532 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 CDR1P51861 262 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 KRT31Q15323 416 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 USH1GQ495M9 461 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 NELFCDQ8IXH7 590 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 CEP112Q8N8E3 955 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 PSMB7Q99436 277 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 CD209Q9NNX6 404 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 MORC2Q9Y6X9 1032 aaPredicted RBP11.76□□□□□ -0.53
CALD1-203ENST00000393118 RCAN1P53805 252 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 SEC23AQ15436 765 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 FCHSD1Q86WN1 690 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 CUL5Q93034 780 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 NAPGQ99747 312 aaPredicted RBP11.76□□□□□ -0.53
CALD1-203ENST00000393118 PLCD4Q9BRC7 762 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 RABEP2Q9H5N1 569 aa11.76□□□□□ -0.53
CALD1-203ENST00000393118 CNNM4Q6P4Q7 775 aa11.75□□□□□ -0.53
CALD1-203ENST00000393118 B4DLN1 442 aa11.75□□□□□ -0.53
CALD1-203ENST00000393118 ORC4O43929 436 aa11.75□□□□□ -0.53
CALD1-203ENST00000393118 PLCG1P19174 1290 aa11.75□□□□□ -0.53
CALD1-203ENST00000393118 KRT83P78385 493 aa11.75□□□□□ -0.53
CALD1-203ENST00000393118 C12orf60Q5U649 245 aa11.75□□□□□ -0.53
CALD1-203ENST00000393118 KCTD1Q719H9 257 aa11.75□□□□□ -0.53
CALD1-203ENST00000393118 CLEC10AQ8IUN9 316 aa11.75□□□□□ -0.53
CALD1-203ENST00000393118 OR8K1Q8NGG5 319 aa11.75□□□□□ -0.53
CALD1-203ENST00000393118 CRACR2AQ9BSW2 395 aa11.75□□□□□ -0.53
CALD1-203ENST00000393118 ZCCHC17Q9NP64 241 aaKnown RBP11.75□□□□□ -0.53
CALD1-203ENST00000393118 H7C1D1 291 aa11.75□□□□□ -0.53
CALD1-203ENST00000393118 ACTN4O43707 911 aaKnown RBP11.75□□□□□ -0.53
CALD1-203ENST00000393118 SMC1AQ14683 1233 aaKnown RBP11.75□□□□□ -0.53
CALD1-203ENST00000393118 GBP3Q9H0R5 595 aa11.75□□□□□ -0.53
CALD1-203ENST00000393118 DISC1Q9NRI5 854 aa11.75□□□□□ -0.53
CALD1-203ENST00000393118 PARP3Q9Y6F1 533 aa11.75□□□□□ -0.53
CALD1-203ENST00000393118 FAM170AA1A519 330 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 SPDYE3A6NKU9 549 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 CACNB3P54284 484 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 ATP2C1P98194 919 aaPredicted RBP11.74□□□□□ -0.53
CALD1-203ENST00000393118 ZNF658Q5TYW1 1059 aaPredicted RBP11.74□□□□□ -0.53
CALD1-203ENST00000393118 CEP95Q96GE4 821 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 GPSM2P81274 684 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 CEP89Q96ST8 783 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 HINFPQ9BQA5 517 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 CNTNAP5Q8WYK1 1306 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 USP17L5A8MUK1 530 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 PRCPP42785 496 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 ZYXQ15942 572 aaKnown RBP11.74□□□□□ -0.53
CALD1-203ENST00000393118 SLC35F6Q8N357 371 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 DBNDD1Q9H9R9 158 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 FAM196BA6NMK8 535 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 ENC1O14682 589 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 VEGFAP15692 232 aaPredicted RBP11.74□□□□□ -0.53
CALD1-203ENST00000393118 TRIM14Q14142 442 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 LRRC41Q15345 812 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 SYCP1Q15431 976 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 HERC4Q5GLZ8 1057 aaPredicted RBP11.74□□□□□ -0.53
CALD1-203ENST00000393118 SPAG5Q96R06 1193 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 NAA15Q9BXJ9 866 aaKnown RBP11.74□□□□□ -0.53
CALD1-203ENST00000393118 NLRC4Q9NPP4 1024 aa11.74□□□□□ -0.53
CALD1-203ENST00000393118 PAFAH1B1P43034 410 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 NOP2P46087 812 aaKnown RBP11.73□□□□□ -0.53
CALD1-203ENST00000393118 PKN1Q16512 942 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 UBE2SQ16763 222 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms