RNA–Protein interactions for RNA: ENST00000391828.7

NLRP3-206, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 3,853 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-206ENST00000391828 FAN1Q9Y2M0 1017 aa9.36□□□□□ -0.91
NLRP3-206ENST00000391828 CPDO75976 1380 aa9.36□□□□□ -0.91
NLRP3-206ENST00000391828 SRGAP2O75044 1071 aa9.36□□□□□ -0.91
NLRP3-206ENST00000391828 SASH3O75995 380 aa9.36□□□□□ -0.91
NLRP3-206ENST00000391828 LONP1P36776 959 aaKnown RBP9.36□□□□□ -0.91
NLRP3-206ENST00000391828 CALCRLQ16602 461 aa9.36□□□□□ -0.91
NLRP3-206ENST00000391828 DCAF17Q5H9S7 520 aaPredicted RBP9.36□□□□□ -0.91
NLRP3-206ENST00000391828 KRT25Q7Z3Z0 450 aa9.36□□□□□ -0.91
NLRP3-206ENST00000391828 TC2NQ8N9U0 490 aa9.36□□□□□ -0.91
NLRP3-206ENST00000391828 NCAPGQ9BPX3 1015 aa9.36□□□□□ -0.91
NLRP3-206ENST00000391828 MRPL44Q9H9J2 332 aaKnown RBP9.36□□□□□ -0.91
NLRP3-206ENST00000391828 MED4Q9NPJ6 270 aa9.36□□□□□ -0.91
NLRP3-206ENST00000391828 BAZ2BQ9UIF8 2168 aaKnown RBP9.36□□□□□ -0.91
NLRP3-206ENST00000391828 BUB1O43683 1085 aa9.36□□□□□ -0.91
NLRP3-206ENST00000391828 HLA-DOAP06340 250 aa9.36□□□□□ -0.91
NLRP3-206ENST00000391828 CXCR5P32302 372 aa9.36□□□□□ -0.91
NLRP3-206ENST00000391828 TMTC3Q6ZXV5 915 aa9.36□□□□□ -0.91
NLRP3-206ENST00000391828 MICALL1Q8N3F8 863 aa9.36□□□□□ -0.91
NLRP3-206ENST00000391828 NUP58Q9BVL2 599 aa9.36□□□□□ -0.91
NLRP3-206ENST00000391828 RIMS1Q86UR5 1692 aaKnown RBP9.36□□□□□ -0.91
NLRP3-206ENST00000391828 CACNA1FO60840 1977 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 NDUFA10O95299 355 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 OR52Z1P0C646 297 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 RDXP35241 583 aaKnown RBP9.35□□□□□ -0.91
NLRP3-206ENST00000391828 PRCPP42785 496 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 LRRC41Q15345 812 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 ZNF658Q5TYW1 1059 aaPredicted RBP9.35□□□□□ -0.91
NLRP3-206ENST00000391828 C8orf74Q6P047 294 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 USP17L2Q6R6M4 530 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 ZNF579Q8NAF0 562 aaKnown RBP9.35□□□□□ -0.91
NLRP3-206ENST00000391828 SLC44A5Q8NCS7 719 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 CELF1Q92879 486 aaKnown RBP9.35□□□□□ -0.91
NLRP3-206ENST00000391828 GPR101Q96P66 508 aaPredicted RBP9.35□□□□□ -0.91
NLRP3-206ENST00000391828 ZC3H12CQ9C0D7 883 aaKnown RBP9.35□□□□□ -0.91
NLRP3-206ENST00000391828 ATP8A2Q9NTI2 1148 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 CDHR2Q9BYE9 1310 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 STK36Q9NRP7 1315 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 LOC102724159A0A0B4J2E5 919 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 GOLGA6CA6NDK9 693 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 GOLGA6BA6NDN3 693 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 ANKRD65E5RJM6 399 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 EBAG9O00559 213 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 TBCAO75347 108 aaKnown RBP9.35□□□□□ -0.91
NLRP3-206ENST00000391828 GOLGA6DP0CG33 693 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 PWP2Q15269 919 aaKnown RBP9.35□□□□□ -0.91
NLRP3-206ENST00000391828 LRRC47Q8N1G4 583 aaKnown RBP9.35□□□□□ -0.91
NLRP3-206ENST00000391828 CNBD1Q8NA66 436 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 CNOT6LQ96LI5 555 aaKnown RBP9.35□□□□□ -0.91
NLRP3-206ENST00000391828 GOLGA6AQ9NYA3 693 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 CCNL1Q9UK58 526 aaPredicted RBP9.35□□□□□ -0.91
NLRP3-206ENST00000391828 MEGF6O75095 1541 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 ZNF804BA4D1E1 1349 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 FXR1P51114 621 aaKnown RBP eCLIP9.35□□□□□ -0.91
NLRP3-206ENST00000391828 TCP11X2Q5H9J9 407 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 CFAP58Q5T655 872 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 RAD9BQ6WBX8 426 aa9.35□□□□□ -0.91
NLRP3-206ENST00000391828 EIF3CLB5ME19 914 aaKnown RBP9.34□□□□□ -0.91
NLRP3-206ENST00000391828 OPA1O60313 960 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 TOB1P50616 345 aaPredicted RBP9.34□□□□□ -0.91
NLRP3-206ENST00000391828 PLS1Q14651 629 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 RSRC2Q7L4I2 434 aaKnown RBP9.34□□□□□ -0.91
NLRP3-206ENST00000391828 NEK8Q86SG6 692 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 KLHL7Q8IXQ5 586 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 SYCP3Q8IZU3 236 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 EIF3CQ99613 913 aaKnown RBP9.34□□□□□ -0.91
NLRP3-206ENST00000391828 CHP1Q99653 195 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 RWDD2AQ9UIY3 292 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 PCDHA4Q9UN74 947 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 TRAPPC10P48553 1259 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 MRPL12P52815 198 aaKnown RBP9.34□□□□□ -0.91
NLRP3-206ENST00000391828 MFSD14BQ5SR56 506 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 SRBD1Q8N5C6 995 aaKnown RBP9.34□□□□□ -0.91
NLRP3-206ENST00000391828 HNRNPLLQ8WVV9 542 aaKnown RBP9.34□□□□□ -0.91
NLRP3-206ENST00000391828 PLA2G12BQ9BX93 195 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 HDAC6Q9UBN7 1215 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 SRP68Q9UHB9 627 aaKnown RBP9.34□□□□□ -0.91
NLRP3-206ENST00000391828 MINPP1Q9UNW1 487 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 ZNF335Q9H4Z2 1342 aaPredicted RBP9.34□□□□□ -0.91
NLRP3-206ENST00000391828 PLCG2P16885 1265 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 PLCG1P19174 1290 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 GUCY2CP25092 1073 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 SSR1P43307 286 aaKnown RBP9.34□□□□□ -0.91
NLRP3-206ENST00000391828 NTRK3Q16288 839 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 TRAPPC3LQ5T215 181 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 TTC19Q6DKK2 380 aaPredicted RBP9.34□□□□□ -0.91
NLRP3-206ENST00000391828 CCDC84Q86UT8 332 aaPredicted RBP9.34□□□□□ -0.91
NLRP3-206ENST00000391828 EFCAB13Q8IY85 973 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 CUL5Q93034 780 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 ZNF622Q969S3 477 aaKnown RBP eCLIP9.34□□□□□ -0.91
NLRP3-206ENST00000391828 MAP3K14Q99558 947 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 ABHD10Q9NUJ1 306 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 HPSEQ9Y251 543 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.34□□□□□ -0.91
NLRP3-206ENST00000391828 SALL1Q9NSC2 1324 aa9.34□□□□□ -0.91
NLRP3-206ENST00000391828 TTC26A0AVF1 554 aa9.33□□□□□ -0.92
NLRP3-206ENST00000391828 HPDP32754 393 aaPredicted RBP9.33□□□□□ -0.92
NLRP3-206ENST00000391828 CASP8Q14790 479 aa9.33□□□□□ -0.92
NLRP3-206ENST00000391828 SLC9C1Q4G0N8 1177 aa9.33□□□□□ -0.92
NLRP3-206ENST00000391828 NOX5Q96PH1 765 aa9.33□□□□□ -0.92
NLRP3-206ENST00000391828 TSGA10Q9BZW7 698 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms