RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 RANBP17Q9H2T7 1088 aaKnown RBP13.39□□□□□ -0.27
IGHV4-28-201ENST00000390612 FBXO40Q9UH90 709 aa13.39□□□□□ -0.27
IGHV4-28-201ENST00000390612 NRBP1Q9UHY1 535 aa13.39□□□□□ -0.27
IGHV4-28-201ENST00000390612 SLC16A2P36021 539 aa13.38□□□□□ -0.27
IGHV4-28-201ENST00000390612 TKFCQ3LXA3 575 aa13.38□□□□□ -0.27
IGHV4-28-201ENST00000390612 SYDE2Q5VT97 1194 aa13.38□□□□□ -0.27
IGHV4-28-201ENST00000390612 MAMDC4Q6UXC1 1216 aa13.38□□□□□ -0.27
IGHV4-28-201ENST00000390612 STOX1Q6ZVD7 989 aa13.38□□□□□ -0.27
IGHV4-28-201ENST00000390612 ZNF467Q7Z7K2 595 aaPredicted RBP13.38□□□□□ -0.27
IGHV4-28-201ENST00000390612 MSL3Q8N5Y2 521 aaKnown RBP13.38□□□□□ -0.27
IGHV4-28-201ENST00000390612 PNMA1Q8ND90 353 aa13.38□□□□□ -0.27
IGHV4-28-201ENST00000390612 DIS3LQ8TF46 1054 aaKnown RBP13.38□□□□□ -0.27
IGHV4-28-201ENST00000390612 PAWRQ96IZ0 340 aaKnown RBP13.38□□□□□ -0.27
IGHV4-28-201ENST00000390612 CCDC136Q96JN2 1154 aa13.38□□□□□ -0.27
IGHV4-28-201ENST00000390612 TINF2Q9BSI4 451 aa13.38□□□□□ -0.27
IGHV4-28-201ENST00000390612 DDX20Q9UHI6 824 aaKnown RBP13.38□□□□□ -0.27
IGHV4-28-201ENST00000390612 RBM8AQ9Y5S9 174 aaKnown RBP13.38□□□□□ -0.27
IGHV4-28-201ENST00000390612 TNKSO95271 1327 aa13.38□□□□□ -0.27
IGHV4-28-201ENST00000390612 E7EWF7 191 aa13.37□□□□□ -0.27
IGHV4-28-201ENST00000390612 MSCO60682 206 aa13.37□□□□□ -0.27
IGHV4-28-201ENST00000390612 ICAM1P05362 532 aa13.37□□□□□ -0.27
IGHV4-28-201ENST00000390612 COL6A1P12109 1028 aa13.37□□□□□ -0.27
IGHV4-28-201ENST00000390612 SNAP25P60880 206 aa13.37□□□□□ -0.27
IGHV4-28-201ENST00000390612 IKQ13123 557 aaPredicted RBP13.37□□□□□ -0.27
IGHV4-28-201ENST00000390612 CCDC96Q2M329 555 aa13.37□□□□□ -0.27
IGHV4-28-201ENST00000390612 PRAMEF19Q5SWL8 479 aa13.37□□□□□ -0.27
IGHV4-28-201ENST00000390612 GPATCH4Q5T3I0 446 aaKnown RBP13.37□□□□□ -0.27
IGHV4-28-201ENST00000390612 FAM133AQ8N9E0 248 aa13.37□□□□□ -0.27
IGHV4-28-201ENST00000390612 GPCPD1Q9NPB8 672 aa13.37□□□□□ -0.27
IGHV4-28-201ENST00000390612 MTMR7Q9Y216 660 aa13.37□□□□□ -0.27
IGHV4-28-201ENST00000390612 CTDP1Q9Y5B0 961 aaPredicted RBP13.37□□□□□ -0.27
IGHV4-28-201ENST00000390612 FRMPD2Q68DX3 1309 aaPredicted RBP13.37□□□□□ -0.27
IGHV4-28-201ENST00000390612 SEPT4O43236 478 aa13.36□□□□□ -0.27
IGHV4-28-201ENST00000390612 SNAI1O95863 264 aaPredicted RBP13.36□□□□□ -0.27
IGHV4-28-201ENST00000390612 ZNF865P0CJ78 1059 aaPredicted RBP13.36□□□□□ -0.27
IGHV4-28-201ENST00000390612 NECTIN1Q15223 517 aa13.36□□□□□ -0.27
IGHV4-28-201ENST00000390612 MUM1L1Q5H9M0 696 aa13.36□□□□□ -0.27
IGHV4-28-201ENST00000390612 NECAB2Q7Z6G3 386 aa13.36□□□□□ -0.27
IGHV4-28-201ENST00000390612 DDX11Q96FC9 970 aa13.36□□□□□ -0.27
IGHV4-28-201ENST00000390612 TRERF1Q96PN7 1200 aa13.36□□□□□ -0.27
IGHV4-28-201ENST00000390612 ACAD9Q9H845 621 aa13.36□□□□□ -0.27
IGHV4-28-201ENST00000390612 A1CFQ9NQ94 594 aaKnown RBP13.36□□□□□ -0.27
IGHV4-28-201ENST00000390612 RNF146Q9NTX7 359 aa13.36□□□□□ -0.27
IGHV4-28-201ENST00000390612 SYNGAP1Q96PV0 1343 aa13.36□□□□□ -0.27
IGHV4-28-201ENST00000390612 TAL1P17542 331 aaPredicted RBP13.35□□□□□ -0.27
IGHV4-28-201ENST00000390612 CCDC174Q6PII3 467 aa13.35□□□□□ -0.27
IGHV4-28-201ENST00000390612 MB21D2Q8IYB1 491 aaPredicted RBP13.35□□□□□ -0.27
IGHV4-28-201ENST00000390612 UBAC1Q9BSL1 405 aa13.35□□□□□ -0.27
IGHV4-28-201ENST00000390612 HTATIP2Q9BUP3 242 aa13.35□□□□□ -0.27
IGHV4-28-201ENST00000390612 KAT14Q9H8E8 782 aa13.35□□□□□ -0.27
IGHV4-28-201ENST00000390612 ISY1Q9ULR0 285 aaKnown RBP13.35□□□□□ -0.27
IGHV4-28-201ENST00000390612 PFASO15067 1338 aa13.35□□□□□ -0.27
IGHV4-28-201ENST00000390612 WDR19Q8NEZ3 1342 aa13.35□□□□□ -0.27
IGHV4-28-201ENST00000390612 LRRC37A2A6NM11 1700 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 SOWAHBA6NEL2 793 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 GOLGA8HP0CJ92 632 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 ALAS1P13196 640 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 SLC4A3P48751 1232 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 ANTXR2P58335 489 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 CNTN2Q02246 1040 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 TRDNQ13061 729 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 ASPRV1Q53RT3 343 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 ERICH6BQ5W0A0 696 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 KIAA1211Q6ZU35 1233 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 ANKRD35Q8N283 1001 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 NCOA7Q8NI08 942 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 IGDCC4Q8TDY8 1250 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 CLEC4DQ8WXI8 215 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 KATNBL1Q9H079 304 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 HOMER2Q9NSB8 354 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 CYP39A1Q9NYL5 469 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 PNMA2Q9UL42 364 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 CCPG1Q9ULG6 757 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 ASTN1O14525 1302 aa13.34□□□□□ -0.27
IGHV4-28-201ENST00000390612 SLC27A2O14975 620 aa13.33□□□□□ -0.28
IGHV4-28-201ENST00000390612 CNGA1P29973 690 aa13.33□□□□□ -0.28
IGHV4-28-201ENST00000390612 COL9A3Q14050 684 aaPredicted RBP13.33□□□□□ -0.28
IGHV4-28-201ENST00000390612 IFIT1BQ5T764 474 aaKnown RBP13.33□□□□□ -0.28
IGHV4-28-201ENST00000390612 MTMR8Q96EF0 704 aa13.33□□□□□ -0.28
IGHV4-28-201ENST00000390612 MTA3Q9BTC8 594 aa13.33□□□□□ -0.28
IGHV4-28-201ENST00000390612 UBA5Q9GZZ9 404 aa13.33□□□□□ -0.28
IGHV4-28-201ENST00000390612 CPVLQ9H3G5 476 aa13.33□□□□□ -0.28
IGHV4-28-201ENST00000390612 C11orf49Q9H6J7 331 aa13.33□□□□□ -0.28
IGHV4-28-201ENST00000390612 SENP2Q9HC62 589 aa13.33□□□□□ -0.28
IGHV4-28-201ENST00000390612 LAMA2P24043 3122 aaKnown RBP13.32□□□□□ -0.28
IGHV4-28-201ENST00000390612 PALM3A6NDB9 673 aaPredicted RBP13.32□□□□□ -0.28
IGHV4-28-201ENST00000390612 H0YGN5 161 aa13.32□□□□□ -0.28
IGHV4-28-201ENST00000390612 POTEB2H3BUK9 544 aa13.32□□□□□ -0.28
IGHV4-28-201ENST00000390612 DNM1LO00429 736 aa13.32□□□□□ -0.28
IGHV4-28-201ENST00000390612 CDC45O75419 566 aa13.32□□□□□ -0.28
IGHV4-28-201ENST00000390612 PARP1P09874 1014 aaKnown RBP13.32□□□□□ -0.28
IGHV4-28-201ENST00000390612 TROAPQ12815 778 aa13.32□□□□□ -0.28
IGHV4-28-201ENST00000390612 SLC35G1Q2M3R5 365 aa13.32□□□□□ -0.28
IGHV4-28-201ENST00000390612 CREB3L3Q68CJ9 461 aa13.32□□□□□ -0.28
IGHV4-28-201ENST00000390612 ADGRF4Q8IZF3 695 aa13.32□□□□□ -0.28
IGHV4-28-201ENST00000390612 STAG2Q8N3U4 1231 aa13.32□□□□□ -0.28
IGHV4-28-201ENST00000390612 MORC4Q8TE76 937 aa13.32□□□□□ -0.28
IGHV4-28-201ENST00000390612 DPF3Q92784 378 aa13.32□□□□□ -0.28
IGHV4-28-201ENST00000390612 MAF1Q9H063 256 aa13.32□□□□□ -0.28
IGHV4-28-201ENST00000390612 MAD2L2Q9UI95 211 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms