RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 NRAPQ86VF7 1730 aa13.16□□□□□ -0.3
RAPGEF3-201ENST00000389212 CCDC194A0A1B0GVG4 234 aa13.16□□□□□ -0.3
RAPGEF3-201ENST00000389212 BMP15O95972 392 aa13.16□□□□□ -0.3
RAPGEF3-201ENST00000389212 MAD2L2Q9UI95 211 aa13.16□□□□□ -0.3
RAPGEF3-201ENST00000389212 RREB1Q92766 1687 aa13.16□□□□□ -0.3
RAPGEF3-201ENST00000389212 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
RAPGEF3-201ENST00000389212 CASZ1Q86V15 1759 aa13.16□□□□□ -0.3
RAPGEF3-201ENST00000389212 H0YHG0 523 aa13.16□□□□□ -0.3
RAPGEF3-201ENST00000389212 PRCPP42785 496 aa13.16□□□□□ -0.3
RAPGEF3-201ENST00000389212 SARNPP82979 210 aaKnown RBP13.16□□□□□ -0.3
RAPGEF3-201ENST00000389212 TMCO3Q6UWJ1 677 aa13.16□□□□□ -0.3
RAPGEF3-201ENST00000389212 SGSM3Q96HU1 749 aa13.16□□□□□ -0.3
RAPGEF3-201ENST00000389212 AHDC1Q5TGY3 1603 aaPredicted RBP13.16□□□□□ -0.3
RAPGEF3-201ENST00000389212 ECM2O94769 699 aaPredicted RBP13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 RPN1P04843 607 aaKnown RBP13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 PCP11498 1178 aaKnown RBP13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 PMS1P54277 932 aaKnown RBP13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 FILIP1LQ4L180 1135 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 SBK1Q52WX2 424 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 PACS2Q86VP3 889 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 FCHSD1Q86WN1 690 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 ZNF444Q8N0Y2 327 aaPredicted RBP13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 LRRC15Q8TF66 581 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 KIFC2Q96AC6 838 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 SRRTQ9BXP5 876 aaKnown RBP13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 DONSONQ9NYP3 566 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 COL22A1Q8NFW1 1626 aaPredicted RBP13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 EP400Q96L91 3159 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 MFAP3LO75121 409 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 PPP2R3AQ06190 1150 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 PAK1Q13153 545 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 MICALL1Q8N3F8 863 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 C4orf32Q8N8J7 132 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 PUF60Q9UHX1 559 aaKnown RBP13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 PCDHA4Q9UN74 947 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 ADGRG1Q9Y653 693 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 GTPBP6O43824 516 aaPredicted RBP13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 CCDC175P0C221 793 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 PBX1P40424 430 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 USP17L2Q6R6M4 530 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 NUP88Q99567 741 aaPredicted RBP13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 TMEM47Q9BQJ4 181 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 PCDHA6Q9UN73 950 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 PCDHA8Q9Y5H6 950 aa13.15□□□□□ -0.3
RAPGEF3-201ENST00000389212 COL5A3P25940 1745 aaPredicted RBP13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 RFC4P35249 363 aa13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 PDE6BP35913 854 aa13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 MKRN1Q9UHC7 482 aaKnown RBP13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 KCNJ18B7U540 433 aa13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 NEBLO76041 1014 aa13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 COPB1P53618 953 aaKnown RBP13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 KCNJ12Q14500 433 aa13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 NAALADL2Q58DX5 795 aa13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 SRLQ86TD4 932 aa13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 TFR2Q9UP52 801 aa13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 CALRP27797 417 aaKnown RBP13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 ERVK-24P63145 666 aa13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 LETM2Q2VYF4 491 aa13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 ZNF569Q5MCW4 686 aa13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 DTHD1Q6ZMT9 781 aa13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 GPIHBP1Q8IV16 184 aa13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 GIMAP7Q8NHV1 300 aa13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 MRFAP1Q9Y605 127 aa13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 FHOD1Q9Y613 1164 aa13.14□□□□□ -0.31
RAPGEF3-201ENST00000389212 CALML3P27482 149 aa13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 BTDP43251 543 aa13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 MAP3K9P80192 1104 aa13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 GRM4Q14833 912 aa13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 SPTY2D1Q68D10 685 aaPredicted RBP13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 TTC19Q6DKK2 380 aaPredicted RBP13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 FAM196AQ6ZSG2 479 aa13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 CLEC10AQ8IUN9 316 aa13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 PANX2Q96RD6 677 aa13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 UBA5Q9GZZ9 404 aa13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 DISC1Q9NRI5 854 aa13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 ARGLU1Q9NWB6 273 aaPredicted RBP13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 SH3BP1Q9Y3L3 701 aa13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 IRS2Q9Y4H2 1338 aa13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 PNMA6AP0CW24 399 aaPredicted RBP13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 RASA1P20936 1047 aa13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 TXLNAP40222 546 aa13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 UBA7P41226 1012 aa13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 EIF6P56537 245 aaKnown RBP13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 UBXN1Q04323 297 aa13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 HPS3Q969F9 1004 aa13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 SLF1Q9BQI6 1058 aa13.13□□□□□ -0.31
RAPGEF3-201ENST00000389212 MYH8P13535 1937 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 KLRF2D3W0D1 207 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 UFL1O94874 794 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 TUBB4AP04350 444 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 TRAPPC10P48553 1259 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 GPSM2P81274 684 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 TCP11X2Q5H9J9 407 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 ZNF658Q5TYW1 1059 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 DGKHQ86XP1 1220 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 UIMC1Q96RL1 719 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 CHP1Q99653 195 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 PLEKHA4Q9H4M7 779 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 TRIM10Q9UDY6 481 aa13.12□□□□□ -0.31
RAPGEF3-201ENST00000389212 STXBP3O00186 592 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms