RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 CENPCQ03188 943 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 EIF2B5Q13144 721 aaKnown RBP-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 TRA2AQ13595 282 aaKnown RBP eCLIP-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 RBM39Q14498 530 aaKnown RBP-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 SNX17Q15036 470 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 CHRNA2Q15822 529 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 SLFN13Q68D06 897 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 ELMSAN1Q6PJG2 1045 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 SH3BP5LQ7L8J4 393 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 DAAM2Q86T65 1068 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 RIN3Q8TB24 985 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 PGBD4Q96DM1 585 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 ZNF347Q96SE7 839 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 YIPF2Q9BWQ6 316 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 TMPRSS13Q9BYE2 586 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 MUC3BQ9H195 1237 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 HIPK2Q9H2X6 1198 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 ANLNQ9NQW6 1124 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 SPATA6Q9NWH7 488 aaPredicted RBP-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 SLAMF8Q9P0V8 285 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 UTS2RQ9UKP6 389 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 BTBD3Q9Y2F9 522 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 APCP25054 2843 aa-1.23□□□□□ -2.61
RNU6-1340P-201ENST00000384438 ZANQ9Y493 2812 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 MED19A0JLT2 244 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 FAM90A8PA6NJQ4 464 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 ERVH48-1M5A8F1 160 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 CLASP2O75122 1294 aaKnown RBP-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 EFEMP2O95967 443 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 FAM87AP0C7U9 286 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 FAM90A13PP0C7W8 464 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 FAM90A24PP0C7X0 464 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 TGFB3P10600 412 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 CD46P15529 392 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 ITIH2P19823 946 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 DNAJA1P31689 397 aaKnown RBP-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 SOX18P35713 384 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 NKX2-1P43699 371 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 MT4P47944 62 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 PPP2CBP62714 309 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 PPP2CAP67775 309 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 RESTQ13127 1097 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 INPP5JQ15735 1006 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 TSGA10IPQ3SY00 556 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 GNASQ5JWF2 1037 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 HECTD2Q5U5R9 776 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 KIAA1614Q5VZ46 1190 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 ADAM5Q6NVV9 412 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 ZNF449Q6P9G9 518 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 TBC1D9Q6ZT07 1266 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 NR2C2APQ86WQ0 139 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 CHPFQ8IZ52 775 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 CACTIN-AS1Q8N1I8 211 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 KREMEN2Q8NCW0 462 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 SYMPKQ92797 1274 aaKnown RBP-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 BHMTQ93088 406 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 RPL36ALQ969Q0 106 aaKnown RBP-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 BARD1Q99728 777 aaKnown RBP-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 SMG9Q9H0W8 520 aaKnown RBP-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 SGK2Q9HBY8 427 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 ATP13A1Q9HD20 1204 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 ABCB10Q9NRK6 738 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 LATS2Q9NRM7 1088 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 PPME1Q9Y570 386 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 ADGRG1Q9Y653 693 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 PMF1-BGLAPU3KQ54 211 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 COL1A2P08123 1366 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 FRAS1Q86XX4 4008 aa-1.24□□□□□ -2.61
RNU6-1340P-201ENST00000384438 TPRP12270 2363 aaKnown RBP-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 TENM2Q9NT68 2774 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 MYMKA6NI61 221 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 LINC01387J3KSC0 135 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 PAK4O96013 591 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 HNRNPLP14866 589 aaKnown RBP eCLIP-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 CLCN7P51798 805 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 JAM2P57087 298 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 TUBA4AP68366 448 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 FOXO4P98177 505 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 IRF9Q00978 393 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 DSC3Q14574 896 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 LPAL2Q16609 132 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 ICE2Q659A1 982 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 TCTN3Q6NUS6 607 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 RHOUQ7L0Q8 258 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 RETREG3Q86VR2 466 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 MARCH9Q86YJ5 346 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 C11orf53Q8IXP5 236 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 MAPK1IP1LQ8NDC0 245 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 PDZD8Q8NEN9 1154 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 NSMCE1Q8WV22 266 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 HEXIM2Q96MH2 286 aaKnown RBP-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 UNKQ9C0B0 810 aaKnown RBP-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 TSHZ2Q9NRE2 1034 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 TMEM260Q9NX78 707 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 CDV3Q9UKY7 258 aaKnown RBP-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 TP53TG3Q9ULZ0 132 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 ATP1B4Q9UN42 357 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 TBC1D30Q9Y2I9 924 aa-1.25□□□□□ -2.61
RNU6-1340P-201ENST00000384438 HCFC2Q9Y5Z7 792 aa-1.25□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms