RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 SYNPO2Q9UMS6 1093 aa16.77■□□□□ 0.27
SHOX-202ENST00000381575 ZNF536O15090 1300 aa16.76■□□□□ 0.27
SHOX-202ENST00000381575 SYNGAP1Q96PV0 1343 aa16.76■□□□□ 0.27
SHOX-202ENST00000381575 MYADML2A6NDP7 307 aa16.76■□□□□ 0.27
SHOX-202ENST00000381575 SNX17Q15036 470 aa16.76■□□□□ 0.27
SHOX-202ENST00000381575 CCDC96Q2M329 555 aa16.76■□□□□ 0.27
SHOX-202ENST00000381575 LRIT3Q3SXY7 679 aa16.76■□□□□ 0.27
SHOX-202ENST00000381575 MCMDC2Q4G0Z9 681 aa16.76■□□□□ 0.27
SHOX-202ENST00000381575 RNF180Q86T96 592 aa16.76■□□□□ 0.27
SHOX-202ENST00000381575 DEFB123Q8N688 67 aa16.76■□□□□ 0.27
SHOX-202ENST00000381575 STAG1Q8WVM7 1258 aa16.76■□□□□ 0.27
SHOX-202ENST00000381575 RNF146Q9NTX7 359 aa16.76■□□□□ 0.27
SHOX-202ENST00000381575 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.76■□□□□ 0.27
SHOX-202ENST00000381575 PHF24Q9UPV7 400 aa16.76■□□□□ 0.27
SHOX-202ENST00000381575 A0A1W2PQ45 241 aaPredicted RBP16.75■□□□□ 0.27
SHOX-202ENST00000381575 A0A1W2PQY0 241 aa16.75■□□□□ 0.27
SHOX-202ENST00000381575 TRIM43BA6NCK2 446 aa16.75■□□□□ 0.27
SHOX-202ENST00000381575 ADAMTS4O75173 837 aa16.75■□□□□ 0.27
SHOX-202ENST00000381575 HSPD1P10809 573 aaKnown RBP16.75■□□□□ 0.27
SHOX-202ENST00000381575 ALAS1P13196 640 aa16.75■□□□□ 0.27
SHOX-202ENST00000381575 TLE2Q04725 743 aa16.75■□□□□ 0.27
SHOX-202ENST00000381575 ALX1Q15699 326 aa16.75■□□□□ 0.27
SHOX-202ENST00000381575 MAMDC4Q6UXC1 1216 aa16.75■□□□□ 0.27
SHOX-202ENST00000381575 FAM160B2Q86V87 743 aa16.75■□□□□ 0.27
SHOX-202ENST00000381575 SMC5Q8IY18 1101 aa16.75■□□□□ 0.27
SHOX-202ENST00000381575 CHST13Q8NET6 341 aa16.75■□□□□ 0.27
SHOX-202ENST00000381575 CHURC1Q8WUH1 139 aa16.75■□□□□ 0.27
SHOX-202ENST00000381575 BADQ92934 168 aa16.75■□□□□ 0.27
SHOX-202ENST00000381575 TRIM43Q96BQ3 446 aaPredicted RBP16.75■□□□□ 0.27
SHOX-202ENST00000381575 FBXO40Q9UH90 709 aa16.75■□□□□ 0.27
SHOX-202ENST00000381575 CUL9Q8IWT3 2517 aa16.74■□□□□ 0.27
SHOX-202ENST00000381575 EYSQ5T1H1 3165 aa16.74■□□□□ 0.27
SHOX-202ENST00000381575 CCDC171Q6TFL3 1326 aa16.74■□□□□ 0.27
SHOX-202ENST00000381575 ORC4O43929 436 aa16.74■□□□□ 0.27
SHOX-202ENST00000381575 PQBP1O60828 265 aaKnown RBP16.74■□□□□ 0.27
SHOX-202ENST00000381575 SLC16A2P36021 539 aa16.74■□□□□ 0.27
SHOX-202ENST00000381575 OAZ1P54368 228 aa16.74■□□□□ 0.27
SHOX-202ENST00000381575 ACVR2BQ13705 512 aa16.74■□□□□ 0.27
SHOX-202ENST00000381575 MUM1L1Q5H9M0 696 aa16.74■□□□□ 0.27
SHOX-202ENST00000381575 TTBK2Q6IQ55 1244 aa16.74■□□□□ 0.27
SHOX-202ENST00000381575 RCSD1Q6JBY9 416 aa16.74■□□□□ 0.27
SHOX-202ENST00000381575 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.74■□□□□ 0.27
SHOX-202ENST00000381575 ARMCX2Q7L311 632 aa16.74■□□□□ 0.27
SHOX-202ENST00000381575 CCDC144CPQ8IYA2 1237 aa16.74■□□□□ 0.27
SHOX-202ENST00000381575 ACAD9Q9H845 621 aa16.74■□□□□ 0.27
SHOX-202ENST00000381575 A1CFQ9NQ94 594 aaKnown RBP16.74■□□□□ 0.27
SHOX-202ENST00000381575 FAM184BQ9ULE4 1060 aa16.74■□□□□ 0.27
SHOX-202ENST00000381575 PRR12Q9ULL5 1215 aa16.74■□□□□ 0.27
SHOX-202ENST00000381575 FRMPD2Q68DX3 1309 aaPredicted RBP16.73■□□□□ 0.27
SHOX-202ENST00000381575 POTEB2H3BUK9 544 aa16.73■□□□□ 0.27
SHOX-202ENST00000381575 PTGS1P23219 599 aa16.73■□□□□ 0.27
SHOX-202ENST00000381575 ITGB8P26012 769 aa16.73■□□□□ 0.27
SHOX-202ENST00000381575 CCDC144BQ3MJ40 725 aa16.73■□□□□ 0.27
SHOX-202ENST00000381575 C9orf50Q5SZB4 431 aa16.73■□□□□ 0.27
SHOX-202ENST00000381575 ZNF467Q7Z7K2 595 aaPredicted RBP16.73■□□□□ 0.27
SHOX-202ENST00000381575 CHD1LQ86WJ1 897 aa16.73■□□□□ 0.27
SHOX-202ENST00000381575 TBC1D10CQ8IV04 446 aa16.73■□□□□ 0.27
SHOX-202ENST00000381575 PLEKHM2Q8IWE5 1019 aa16.73■□□□□ 0.27
SHOX-202ENST00000381575 MSL3Q8N5Y2 521 aaKnown RBP16.73■□□□□ 0.27
SHOX-202ENST00000381575 TRERF1Q96PN7 1200 aa16.73■□□□□ 0.27
SHOX-202ENST00000381575 RWDD1Q9H446 243 aaPredicted RBP16.73■□□□□ 0.27
SHOX-202ENST00000381575 UNC80Q8N2C7 3258 aa16.73■□□□□ 0.27
SHOX-202ENST00000381575 MYH6P13533 1939 aa16.72■□□□□ 0.27
SHOX-202ENST00000381575 CDH23Q9H251 3354 aa16.72■□□□□ 0.27
SHOX-202ENST00000381575 SOWAHBA6NEL2 793 aa16.72■□□□□ 0.27
SHOX-202ENST00000381575 ACLYP53396 1101 aa16.72■□□□□ 0.27
SHOX-202ENST00000381575 KCNA10Q16322 511 aa16.72■□□□□ 0.27
SHOX-202ENST00000381575 FAM133AQ8N9E0 248 aa16.72■□□□□ 0.27
SHOX-202ENST00000381575 PURBQ96QR8 312 aaKnown RBP16.72■□□□□ 0.27
SHOX-202ENST00000381575 GPCPD1Q9NPB8 672 aa16.72■□□□□ 0.27
SHOX-202ENST00000381575 ASTN1O14525 1302 aa16.71■□□□□ 0.27
SHOX-202ENST00000381575 NEDD4P46934 1319 aa16.71■□□□□ 0.27
SHOX-202ENST00000381575 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.71■□□□□ 0.27
SHOX-202ENST00000381575 FGRP09769 529 aa16.71■□□□□ 0.27
SHOX-202ENST00000381575 C6orf222P0C671 652 aaPredicted RBP16.71■□□□□ 0.27
SHOX-202ENST00000381575 NUCB1Q02818 461 aa16.71■□□□□ 0.27
SHOX-202ENST00000381575 SHHQ15465 462 aa16.71■□□□□ 0.27
SHOX-202ENST00000381575 PPP4R3BQ5MIZ7 849 aa16.71■□□□□ 0.27
SHOX-202ENST00000381575 KLHDC9Q8NEP7 349 aa16.71■□□□□ 0.27
SHOX-202ENST00000381575 TMEM47Q9BQJ4 181 aa16.71■□□□□ 0.27
SHOX-202ENST00000381575 KATNBL1Q9H079 304 aa16.71■□□□□ 0.27
SHOX-202ENST00000381575 ABHD16BQ9H3Z7 469 aa16.71■□□□□ 0.27
SHOX-202ENST00000381575 CCPG1Q9ULG6 757 aa16.71■□□□□ 0.27
SHOX-202ENST00000381575 PRUNE2Q8WUY3 3088 aa16.71■□□□□ 0.26
SHOX-202ENST00000381575 MYO9BQ13459 2157 aa16.7■□□□□ 0.26
SHOX-202ENST00000381575 PLA2G6O60733 806 aa16.7■□□□□ 0.26
SHOX-202ENST00000381575 DUSP11O75319 330 aaKnown RBP16.7■□□□□ 0.26
SHOX-202ENST00000381575 CLTBP09497 229 aa16.7■□□□□ 0.26
SHOX-202ENST00000381575 FDX1P10109 184 aa16.7■□□□□ 0.26
SHOX-202ENST00000381575 SDSP20132 328 aa16.7■□□□□ 0.26
SHOX-202ENST00000381575 NOVP48745 357 aa16.7■□□□□ 0.26
SHOX-202ENST00000381575 C1orf53Q5VUE5 145 aa16.7■□□□□ 0.26
SHOX-202ENST00000381575 NSMFQ6X4W1 530 aa16.7■□□□□ 0.26
SHOX-202ENST00000381575 DCAF4Q8WV16 495 aa16.7■□□□□ 0.26
SHOX-202ENST00000381575 FAM161BQ96MY7 647 aa16.7■□□□□ 0.26
SHOX-202ENST00000381575 ZKSCAN3Q9BRR0 538 aa16.7■□□□□ 0.26
SHOX-202ENST00000381575 STARD7Q9NQZ5 370 aa16.7■□□□□ 0.26
SHOX-202ENST00000381575 ZMYM6O95789 1325 aa16.69■□□□□ 0.26
SHOX-202ENST00000381575 TOP1P11387 765 aaKnown RBP16.69■□□□□ 0.26
SHOX-202ENST00000381575 BEX3Q00994 111 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms