RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 FCER1AP12319 257 aa22.61■■□□□ 1.21
GTF3A-201ENST00000381140 ALAS1P13196 640 aa22.61■■□□□ 1.21
GTF3A-201ENST00000381140 CASTP20810 708 aaKnown RBP22.61■■□□□ 1.21
GTF3A-201ENST00000381140 RGS2P41220 211 aa22.61■■□□□ 1.21
GTF3A-201ENST00000381140 OAZ1P54368 228 aa22.61■■□□□ 1.21
GTF3A-201ENST00000381140 EXOSC10Q01780 885 aaKnown RBP22.61■■□□□ 1.21
GTF3A-201ENST00000381140 MAP2K5Q13163 448 aa22.61■■□□□ 1.21
GTF3A-201ENST00000381140 IRF5Q13568 498 aa22.61■■□□□ 1.21
GTF3A-201ENST00000381140 NBPF11Q86T75 865 aa22.61■■□□□ 1.21
GTF3A-201ENST00000381140 TMTC2Q8N394 836 aa22.61■■□□□ 1.21
GTF3A-201ENST00000381140 MMP19Q99542 508 aa22.61■■□□□ 1.21
GTF3A-201ENST00000381140 RANBP17Q9H2T7 1088 aaKnown RBP22.61■■□□□ 1.21
GTF3A-201ENST00000381140 CCPG1Q9ULG6 757 aa22.61■■□□□ 1.21
GTF3A-201ENST00000381140 ZNF536O15090 1300 aa22.6■■□□□ 1.21
GTF3A-201ENST00000381140 WDR19Q8NEZ3 1342 aa22.6■■□□□ 1.21
GTF3A-201ENST00000381140 RXRAP19793 462 aa22.6■■□□□ 1.21
GTF3A-201ENST00000381140 PSMA5P28066 241 aa22.6■■□□□ 1.21
GTF3A-201ENST00000381140 ADORA2AP29274 412 aa22.6■■□□□ 1.21
GTF3A-201ENST00000381140 LIFRP42702 1097 aa22.6■■□□□ 1.21
GTF3A-201ENST00000381140 GRB14Q14449 540 aa22.6■■□□□ 1.21
GTF3A-201ENST00000381140 KCTD2Q14681 263 aa22.6■■□□□ 1.21
GTF3A-201ENST00000381140 DPP9Q86TI2 863 aa22.6■■□□□ 1.21
GTF3A-201ENST00000381140 SLAIN1Q8ND83 568 aa22.6■■□□□ 1.21
GTF3A-201ENST00000381140 MAD2L2Q9UI95 211 aa22.6■■□□□ 1.21
GTF3A-201ENST00000381140 SLC12A7Q9Y666 1083 aa22.6■■□□□ 1.21
GTF3A-201ENST00000381140 HTTP42858 3142 aa22.6■■□□□ 1.21
GTF3A-201ENST00000381140 STRNO43815 780 aa22.59■■□□□ 1.21
GTF3A-201ENST00000381140 EIF5BO60841 1220 aaKnown RBP22.59■■□□□ 1.21
GTF3A-201ENST00000381140 DDAH1O94760 285 aa22.59■■□□□ 1.21
GTF3A-201ENST00000381140 TROAPQ12815 778 aa22.59■■□□□ 1.21
GTF3A-201ENST00000381140 CCDC144CPQ8IYA2 1237 aa22.59■■□□□ 1.21
GTF3A-201ENST00000381140 ADGRF4Q8IZF3 695 aa22.59■■□□□ 1.21
GTF3A-201ENST00000381140 APBA2Q99767 749 aa22.59■■□□□ 1.21
GTF3A-201ENST00000381140 RNF146Q9NTX7 359 aa22.59■■□□□ 1.21
GTF3A-201ENST00000381140 NAP1L2Q9ULW6 460 aaPredicted RBP22.59■■□□□ 1.21
GTF3A-201ENST00000381140 CDC37Q16543 378 aaPredicted RBP22.58■■□□□ 1.21
GTF3A-201ENST00000381140 CCL14Q16627 93 aa22.58■■□□□ 1.21
GTF3A-201ENST00000381140 CTCFLQ8NI51 663 aaPredicted RBP22.58■■□□□ 1.21
GTF3A-201ENST00000381140 USP6NLQ92738 828 aa22.58■■□□□ 1.21
GTF3A-201ENST00000381140 PALM3A6NDB9 673 aaPredicted RBP22.57■■□□□ 1.2
GTF3A-201ENST00000381140 ICAM1P05362 532 aa22.57■■□□□ 1.2
GTF3A-201ENST00000381140 PGK2P07205 417 aa22.57■■□□□ 1.2
GTF3A-201ENST00000381140 RPS6KB1P23443 525 aa22.57■■□□□ 1.2
GTF3A-201ENST00000381140 SYNE3Q6ZMZ3 975 aa22.57■■□□□ 1.2
GTF3A-201ENST00000381140 Q6ZUG5 572 aa22.57■■□□□ 1.2
GTF3A-201ENST00000381140 MICU3Q86XE3 530 aa22.57■■□□□ 1.2
GTF3A-201ENST00000381140 TRIB2Q92519 343 aa22.57■■□□□ 1.2
GTF3A-201ENST00000381140 ARMC5Q96C12 935 aa22.57■■□□□ 1.2
GTF3A-201ENST00000381140 TRERF1Q96PN7 1200 aa22.57■■□□□ 1.2
GTF3A-201ENST00000381140 COBLO75128 1261 aa22.56■■□□□ 1.2
GTF3A-201ENST00000381140 INHAP05111 366 aa22.56■■□□□ 1.2
GTF3A-201ENST00000381140 USH1GQ495M9 461 aa22.56■■□□□ 1.2
GTF3A-201ENST00000381140 CHST13Q8NET6 341 aa22.56■■□□□ 1.2
GTF3A-201ENST00000381140 NPLOC4Q8TAT6 608 aa22.56■■□□□ 1.2
GTF3A-201ENST00000381140 PXYLP1Q8TE99 480 aa22.56■■□□□ 1.2
GTF3A-201ENST00000381140 PIBF1Q8WXW3 757 aa22.56■■□□□ 1.2
GTF3A-201ENST00000381140 DDX11Q96FC9 970 aa22.56■■□□□ 1.2
GTF3A-201ENST00000381140 ACAD9Q9H845 621 aa22.56■■□□□ 1.2
GTF3A-201ENST00000381140 JMJD4Q9H9V9 463 aa22.56■■□□□ 1.2
GTF3A-201ENST00000381140 FBXO40Q9UH90 709 aa22.56■■□□□ 1.2
GTF3A-201ENST00000381140 MCM3APO60318 1980 aa22.56■■□□□ 1.2
GTF3A-201ENST00000381140 XRCC5P13010 732 aaKnown RBP22.55■■□□□ 1.2
GTF3A-201ENST00000381140 KIF5BP33176 963 aa22.55■■□□□ 1.2
GTF3A-201ENST00000381140 UBXN2AP68543 259 aa22.55■■□□□ 1.2
GTF3A-201ENST00000381140 TKFCQ3LXA3 575 aa22.55■■□□□ 1.2
GTF3A-201ENST00000381140 MUM1L1Q5H9M0 696 aa22.55■■□□□ 1.2
GTF3A-201ENST00000381140 SGMS1Q86VZ5 419 aa22.55■■□□□ 1.2
GTF3A-201ENST00000381140 HOMER1Q86YM7 354 aa22.55■■□□□ 1.2
GTF3A-201ENST00000381140 ABRAQ8N0Z2 381 aa22.55■■□□□ 1.2
GTF3A-201ENST00000381140 ANKRD35Q8N283 1001 aa22.55■■□□□ 1.2
GTF3A-201ENST00000381140 ZNF333Q96JL9 665 aa22.55■■□□□ 1.2
GTF3A-201ENST00000381140 UPF3BQ9BZI7 483 aaKnown RBP22.55■■□□□ 1.2
GTF3A-201ENST00000381140 BRPF3Q9ULD4 1205 aa22.55■■□□□ 1.2
GTF3A-201ENST00000381140 CYP46A1Q9Y6A2 500 aa22.55■■□□□ 1.2
GTF3A-201ENST00000381140 RBBP6Q7Z6E9 1792 aaKnown RBP22.55■■□□□ 1.2
GTF3A-201ENST00000381140 KIAA0100Q14667 2235 aaKnown RBP22.55■■□□□ 1.2
GTF3A-201ENST00000381140 KLF18A0A0U1RQI7 1052 aa22.54■■□□□ 1.2
GTF3A-201ENST00000381140 HMGCRP04035 888 aa22.54■■□□□ 1.2
GTF3A-201ENST00000381140 CALM1P0DP23 149 aa22.54■■□□□ 1.2
GTF3A-201ENST00000381140 CALM2P0DP24 149 aa22.54■■□□□ 1.2
GTF3A-201ENST00000381140 CALM3P0DP25 149 aa22.54■■□□□ 1.2
GTF3A-201ENST00000381140 SOX10P56693 466 aa22.54■■□□□ 1.2
GTF3A-201ENST00000381140 TRIM32Q13049 653 aa22.54■■□□□ 1.2
GTF3A-201ENST00000381140 QRICH1Q2TAL8 776 aa22.54■■□□□ 1.2
GTF3A-201ENST00000381140 RUFY3Q7L099 469 aa22.54■■□□□ 1.2
GTF3A-201ENST00000381140 BRF1Q92994 677 aa22.54■■□□□ 1.2
GTF3A-201ENST00000381140 SLC5A4Q9NY91 659 aa22.54■■□□□ 1.2
GTF3A-201ENST00000381140 APOBRQ0VD83 1088 aa22.53■■□□□ 1.2
GTF3A-201ENST00000381140 MTFR1Q15390 333 aa22.53■■□□□ 1.2
GTF3A-201ENST00000381140 APOA5Q6Q788 366 aa22.53■■□□□ 1.2
GTF3A-201ENST00000381140 NSMFQ6X4W1 530 aa22.53■■□□□ 1.2
GTF3A-201ENST00000381140 ZSWIM6Q9HCJ5 1215 aa22.53■■□□□ 1.2
GTF3A-201ENST00000381140 FLRT1Q9NZU1 646 aa22.53■■□□□ 1.2
GTF3A-201ENST00000381140 CENPFP49454 3210 aa22.52■■□□□ 1.2
GTF3A-201ENST00000381140 ZBTB43O43298 467 aa22.52■■□□□ 1.2
GTF3A-201ENST00000381140 PLEKHA8P1O95397 391 aa22.52■■□□□ 1.2
GTF3A-201ENST00000381140 HOXC6P09630 235 aa22.52■■□□□ 1.2
GTF3A-201ENST00000381140 SLC35G1Q2M3R5 365 aa22.52■■□□□ 1.2
GTF3A-201ENST00000381140 TRMT44Q8IYL2 757 aaKnown RBP22.52■■□□□ 1.2
GTF3A-201ENST00000381140 MAP3K14Q99558 947 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms