RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 SYCE3A1L190 88 aa9.16□□□□□ -0.94
ERCC8-202ENST00000381118 POTECB2RU33 542 aa9.16□□□□□ -0.94
ERCC8-202ENST00000381118 NR1I2O75469 434 aa9.16□□□□□ -0.94
ERCC8-202ENST00000381118 POTEIP0CG38 1075 aa9.16□□□□□ -0.94
ERCC8-202ENST00000381118 POTEJP0CG39 1038 aa9.16□□□□□ -0.94
ERCC8-202ENST00000381118 PTPRAP18433 802 aa9.16□□□□□ -0.94
ERCC8-202ENST00000381118 PTPAQ15257 358 aa9.16□□□□□ -0.94
ERCC8-202ENST00000381118 ZNF174Q15697 407 aa9.16□□□□□ -0.94
ERCC8-202ENST00000381118 INF2Q27J81 1249 aa9.16□□□□□ -0.94
ERCC8-202ENST00000381118 JAKMIP3Q5VZ66 844 aa9.16□□□□□ -0.94
ERCC8-202ENST00000381118 CCAR1Q8IX12 1150 aaKnown RBP9.16□□□□□ -0.94
ERCC8-202ENST00000381118 MTMR8Q96EF0 704 aa9.16□□□□□ -0.94
ERCC8-202ENST00000381118 TMEM260Q9NX78 707 aa9.16□□□□□ -0.94
ERCC8-202ENST00000381118 ZNF112Q9UJU3 913 aa9.16□□□□□ -0.94
ERCC8-202ENST00000381118 NOL7Q9UMY1 257 aaKnown RBP9.16□□□□□ -0.94
ERCC8-202ENST00000381118 PCDHA1Q9Y5I3 950 aa9.16□□□□□ -0.94
ERCC8-202ENST00000381118 WDR90Q96KV7 1748 aa9.15□□□□□ -0.94
ERCC8-202ENST00000381118 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.15□□□□□ -0.94
ERCC8-202ENST00000381118 A0A1B0GVL5 298 aa9.15□□□□□ -0.94
ERCC8-202ENST00000381118 IQCA1LA6NCM1 817 aa9.15□□□□□ -0.94
ERCC8-202ENST00000381118 hCG_1984214I3L0E3 225 aa9.15□□□□□ -0.94
ERCC8-202ENST00000381118 M0R2N6 131 aa9.15□□□□□ -0.94
ERCC8-202ENST00000381118 USP2O75604 605 aaPredicted RBP9.15□□□□□ -0.94
ERCC8-202ENST00000381118 ADCY7P51828 1080 aa9.15□□□□□ -0.94
ERCC8-202ENST00000381118 TTLL12Q14166 644 aaPredicted RBP9.15□□□□□ -0.94
ERCC8-202ENST00000381118 UBE2SQ16763 222 aa9.15□□□□□ -0.94
ERCC8-202ENST00000381118 SPECC1Q5M775 1068 aa9.15□□□□□ -0.94
ERCC8-202ENST00000381118 TTC38Q5R3I4 469 aa9.15□□□□□ -0.94
ERCC8-202ENST00000381118 ADALQ6DHV7 355 aa9.15□□□□□ -0.94
ERCC8-202ENST00000381118 CCDC174Q6PII3 467 aa9.15□□□□□ -0.94
ERCC8-202ENST00000381118 REXO1Q8N1G1 1221 aaKnown RBP9.15□□□□□ -0.94
ERCC8-202ENST00000381118 ZNF713Q8N859 430 aaPredicted RBP9.15□□□□□ -0.94
ERCC8-202ENST00000381118 DAGLBQ8NCG7 672 aa9.15□□□□□ -0.94
ERCC8-202ENST00000381118 SYAP1Q96A49 352 aaPredicted RBP9.15□□□□□ -0.94
ERCC8-202ENST00000381118 CLIC6Q96NY7 704 aa9.15□□□□□ -0.94
ERCC8-202ENST00000381118 GOLPH3LQ9H4A5 285 aa9.15□□□□□ -0.94
ERCC8-202ENST00000381118 DACT1Q9NYF0 836 aa9.15□□□□□ -0.94
ERCC8-202ENST00000381118 PPP1R12BO60237 982 aaPredicted RBP9.15□□□□□ -0.95
ERCC8-202ENST00000381118 MCM7P33993 719 aa9.15□□□□□ -0.95
ERCC8-202ENST00000381118 CAMK4Q16566 473 aa9.15□□□□□ -0.95
ERCC8-202ENST00000381118 GALNT17Q6IS24 598 aa9.15□□□□□ -0.95
ERCC8-202ENST00000381118 MOB2Q70IA6 237 aa9.15□□□□□ -0.95
ERCC8-202ENST00000381118 FSIP1Q8NA03 581 aa9.15□□□□□ -0.95
ERCC8-202ENST00000381118 ZNF280CQ8ND82 737 aa9.15□□□□□ -0.95
ERCC8-202ENST00000381118 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.15□□□□□ -0.95
ERCC8-202ENST00000381118 AMNQ9BXJ7 453 aa9.15□□□□□ -0.95
ERCC8-202ENST00000381118 TANGO6Q9C0B7 1094 aa9.15□□□□□ -0.95
ERCC8-202ENST00000381118 AS3MTQ9HBK9 375 aa9.15□□□□□ -0.95
ERCC8-202ENST00000381118 COL11A1P12107 1806 aaPredicted RBP9.14□□□□□ -0.95
ERCC8-202ENST00000381118 PARP14Q460N5 1801 aa9.14□□□□□ -0.95
ERCC8-202ENST00000381118 PTPRFP10586 1907 aa9.14□□□□□ -0.95
ERCC8-202ENST00000381118 PPP6R2O75170 966 aa9.14□□□□□ -0.95
ERCC8-202ENST00000381118 VCAM1P19320 739 aa9.14□□□□□ -0.95
ERCC8-202ENST00000381118 HMGCS2P54868 508 aa9.14□□□□□ -0.95
ERCC8-202ENST00000381118 BACE1P56817 501 aa9.14□□□□□ -0.95
ERCC8-202ENST00000381118 GRIN1Q05586 938 aa9.14□□□□□ -0.95
ERCC8-202ENST00000381118 VGLL4Q14135 290 aa9.14□□□□□ -0.95
ERCC8-202ENST00000381118 CCDC183Q5T5S1 534 aa9.14□□□□□ -0.95
ERCC8-202ENST00000381118 BTNL9Q6UXG8 535 aa9.14□□□□□ -0.95
ERCC8-202ENST00000381118 FBXO11Q86XK2 927 aa9.14□□□□□ -0.95
ERCC8-202ENST00000381118 JMYQ8N9B5 988 aa9.14□□□□□ -0.95
ERCC8-202ENST00000381118 CHURC1Q8WUH1 139 aa9.14□□□□□ -0.95
ERCC8-202ENST00000381118 CDCA5Q96FF9 252 aa9.14□□□□□ -0.95
ERCC8-202ENST00000381118 KIAA1683Q9H0B3 1180 aa9.14□□□□□ -0.95
ERCC8-202ENST00000381118 ZNF408Q9H9D4 720 aa9.14□□□□□ -0.95
ERCC8-202ENST00000381118 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.14□□□□□ -0.95
ERCC8-202ENST00000381118 CEP131Q9UPN4 1083 aa9.14□□□□□ -0.95
ERCC8-202ENST00000381118 ESYT2A0FGR8 921 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 USP17L15C9J2P7 530 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 USP17L13C9JLJ4 530 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 USP17L11C9JVI0 530 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 USP17L18D6R9N7 530 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 USP17L22D6RA61 530 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 USP17L17D6RBQ6 530 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 USP17L19D6RCP7 530 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 USP17L20D6RJB6 530 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 WDR46O15213 610 aaKnown RBP9.13□□□□□ -0.95
ERCC8-202ENST00000381118 NF2P35240 595 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 USP17L24Q0WX57 530 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 AXDND1Q5T1B0 1012 aaPredicted RBP9.13□□□□□ -0.95
ERCC8-202ENST00000381118 MAP1SQ66K74 1059 aaPredicted RBP9.13□□□□□ -0.95
ERCC8-202ENST00000381118 USP17L6PQ6QN14 398 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 CCDC73Q6ZRK6 1079 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.13□□□□□ -0.95
ERCC8-202ENST00000381118 ZNF526Q8TF50 670 aaPredicted RBP9.13□□□□□ -0.95
ERCC8-202ENST00000381118 ZC3H15Q8WU90 426 aaKnown RBP9.13□□□□□ -0.95
ERCC8-202ENST00000381118 MRPS27Q92552 414 aaKnown RBP9.13□□□□□ -0.95
ERCC8-202ENST00000381118 CUL5Q93034 780 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 PSTPIP2Q9H939 334 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 RIC8AQ9NPQ8 531 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 EMILIN3Q9NT22 766 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 GINM1Q9NU53 330 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 PAPPA2Q9BXP8 1791 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 FLOT1O75955 427 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 NDUFA8P51970 172 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 USP14P54578 494 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 FMR1Q06787 632 aaKnown RBP eCLIP9.13□□□□□ -0.95
ERCC8-202ENST00000381118 PTGDRQ13258 359 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 NONOQ15233 471 aaKnown RBP eCLIP9.13□□□□□ -0.95
ERCC8-202ENST00000381118 LETM2Q2VYF4 491 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms