RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 SMARCE1Q969G3 411 aa16.16■□□□□ 0.18
CLCN4-201ENST00000380829 GPCPD1Q9NPB8 672 aa16.16■□□□□ 0.18
CLCN4-201ENST00000380829 CASP1P29466 404 aa16.16■□□□□ 0.18
CLCN4-201ENST00000380829 FKBP1AP62942 108 aaKnown RBP16.16■□□□□ 0.18
CLCN4-201ENST00000380829 IRX3P78415 501 aaPredicted RBP16.16■□□□□ 0.18
CLCN4-201ENST00000380829 ZMYND12Q9H0C1 365 aa16.16■□□□□ 0.18
CLCN4-201ENST00000380829 SMCO2A6NFE2 343 aa16.15■□□□□ 0.18
CLCN4-201ENST00000380829 GALNT17Q6IS24 598 aa16.15■□□□□ 0.18
CLCN4-201ENST00000380829 C4orf32Q8N8J7 132 aa16.15■□□□□ 0.18
CLCN4-201ENST00000380829 ZNF646O15015 1829 aaPredicted RBP16.15■□□□□ 0.18
CLCN4-201ENST00000380829 SMC2O95347 1197 aa16.15■□□□□ 0.18
CLCN4-201ENST00000380829 ATP1A3P13637 1013 aa16.15■□□□□ 0.18
CLCN4-201ENST00000380829 CDC25AP30304 524 aa16.15■□□□□ 0.18
CLCN4-201ENST00000380829 SARSP49591 514 aaKnown RBP16.15■□□□□ 0.18
CLCN4-201ENST00000380829 KANK3Q6NY19 840 aa16.15■□□□□ 0.18
CLCN4-201ENST00000380829 SH3BP5LQ7L8J4 393 aa16.15■□□□□ 0.18
CLCN4-201ENST00000380829 MRIQ9BWK5 157 aa16.15■□□□□ 0.18
CLCN4-201ENST00000380829 HSD3B7Q9H2F3 369 aa16.15■□□□□ 0.18
CLCN4-201ENST00000380829 RIOX1Q9H6W3 641 aa16.15■□□□□ 0.18
CLCN4-201ENST00000380829 TRMT1Q9NXH9 659 aaKnown RBP16.15■□□□□ 0.18
CLCN4-201ENST00000380829 IFNKQ9P0W0 207 aa16.15■□□□□ 0.18
CLCN4-201ENST00000380829 MYO3BQ8WXR4 1341 aa16.14■□□□□ 0.17
CLCN4-201ENST00000380829 IKBKBO14920 756 aa16.14■□□□□ 0.17
CLCN4-201ENST00000380829 TPM4P67936 248 aa16.14■□□□□ 0.17
CLCN4-201ENST00000380829 ASPRV1Q53RT3 343 aa16.14■□□□□ 0.17
CLCN4-201ENST00000380829 NT5DC1Q5TFE4 455 aa16.14■□□□□ 0.17
CLCN4-201ENST00000380829 FILIP1Q7Z7B0 1213 aa16.14■□□□□ 0.17
CLCN4-201ENST00000380829 NEK11Q8NG66 645 aa16.14■□□□□ 0.17
CLCN4-201ENST00000380829 CCDC12Q8WUD4 166 aaPredicted RBP16.14■□□□□ 0.17
CLCN4-201ENST00000380829 STAMQ92783 540 aa16.14■□□□□ 0.17
CLCN4-201ENST00000380829 PAGE5Q96GU1 130 aa16.14■□□□□ 0.17
CLCN4-201ENST00000380829 EHD4Q9H223 541 aa16.14■□□□□ 0.17
CLCN4-201ENST00000380829 TDRD3Q9H7E2 651 aaKnown RBP16.14■□□□□ 0.17
CLCN4-201ENST00000380829 SERPINA10Q9UK55 444 aa16.14■□□□□ 0.17
CLCN4-201ENST00000380829 SNHG28P0DPA3 235 aa16.14■□□□□ 0.17
CLCN4-201ENST00000380829 SMARCA1P28370 1054 aa16.14■□□□□ 0.17
CLCN4-201ENST00000380829 HDLBPQ00341 1268 aaKnown RBP16.14■□□□□ 0.17
CLCN4-201ENST00000380829 MYL5Q02045 173 aa16.14■□□□□ 0.17
CLCN4-201ENST00000380829 SOGA3Q5TF21 947 aa16.14■□□□□ 0.17
CLCN4-201ENST00000380829 IDI2Q9BXS1 227 aa16.14■□□□□ 0.17
CLCN4-201ENST00000380829 XPO4Q9C0E2 1151 aaKnown RBP16.14■□□□□ 0.17
CLCN4-201ENST00000380829 TMEM60Q9H2L4 133 aa16.14■□□□□ 0.17
CLCN4-201ENST00000380829 RAD21O60216 631 aa16.13■□□□□ 0.17
CLCN4-201ENST00000380829 TTBK2Q6IQ55 1244 aa16.13■□□□□ 0.17
CLCN4-201ENST00000380829 LRRN4CLQ8ND94 238 aa16.13■□□□□ 0.17
CLCN4-201ENST00000380829 COA7Q96BR5 231 aa16.13■□□□□ 0.17
CLCN4-201ENST00000380829 C6orf50Q9HD87 102 aa16.13■□□□□ 0.17
CLCN4-201ENST00000380829 SF3B2Q13435 895 aaKnown RBP16.13■□□□□ 0.17
CLCN4-201ENST00000380829 MORC3Q14149 939 aa16.13■□□□□ 0.17
CLCN4-201ENST00000380829 PTPN14Q15678 1187 aa16.13■□□□□ 0.17
CLCN4-201ENST00000380829 CCDC96Q2M329 555 aa16.13■□□□□ 0.17
CLCN4-201ENST00000380829 CFAP100Q494V2 611 aa16.13■□□□□ 0.17
CLCN4-201ENST00000380829 ARL6IP4Q66PJ3 421 aaKnown RBP16.13■□□□□ 0.17
CLCN4-201ENST00000380829 CC2D2BQ6DHV5 1058 aa16.13■□□□□ 0.17
CLCN4-201ENST00000380829 TTLL6Q8N841 843 aa16.13■□□□□ 0.17
CLCN4-201ENST00000380829 SUPT20HQ8NEM7 779 aa16.13■□□□□ 0.17
CLCN4-201ENST00000380829 DHX36Q9H2U1 1008 aaKnown RBP16.13■□□□□ 0.17
CLCN4-201ENST00000380829 PI4KBQ9UBF8 816 aa16.13■□□□□ 0.17
CLCN4-201ENST00000380829 SIPA1L1O43166 1804 aa16.12■□□□□ 0.17
CLCN4-201ENST00000380829 C10orf71Q711Q0 1435 aa16.12■□□□□ 0.17
CLCN4-201ENST00000380829 GNA11P29992 359 aa16.12■□□□□ 0.17
CLCN4-201ENST00000380829 SLC16A2P36021 539 aa16.12■□□□□ 0.17
CLCN4-201ENST00000380829 BAG6P46379 1132 aa16.12■□□□□ 0.17
CLCN4-201ENST00000380829 ZNF543Q08ER8 600 aa16.12■□□□□ 0.17
CLCN4-201ENST00000380829 KCTD1Q719H9 257 aa16.12■□□□□ 0.17
CLCN4-201ENST00000380829 ERO1AQ96HE7 468 aa16.12■□□□□ 0.17
CLCN4-201ENST00000380829 PRMT6Q96LA8 375 aaPredicted RBP16.12■□□□□ 0.17
CLCN4-201ENST00000380829 BIN2Q9UBW5 565 aaPredicted RBP16.12■□□□□ 0.17
CLCN4-201ENST00000380829 FMR1Q06787 632 aaKnown RBP eCLIP16.11■□□□□ 0.17
CLCN4-201ENST00000380829 LETM2Q2VYF4 491 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 CERKLQ49MI3 558 aaPredicted RBP16.11■□□□□ 0.17
CLCN4-201ENST00000380829 HSP90AA4PQ58FG1 418 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 JAKMIP3Q5VZ66 844 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 SH3RF1Q7Z6J0 888 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 SPATA20Q8TB22 786 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 CCDC34Q96HJ3 373 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 FANCLQ9NW38 375 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 TMEM260Q9NX78 707 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 PP2D1A8MPX8 630 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 RAD17O75943 681 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 DPEP1P16444 411 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 FANCCQ00597 558 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 NONOQ15233 471 aaKnown RBP eCLIP16.11■□□□□ 0.17
CLCN4-201ENST00000380829 E2F4Q16254 413 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 NYAP1Q6ZVC0 841 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 KRT25Q7Z3Z0 450 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 TRMT44Q8IYL2 757 aaKnown RBP16.11■□□□□ 0.17
CLCN4-201ENST00000380829 ADGRF4Q8IZF3 695 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 CCDC17Q96LX7 622 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 JMJD4Q9H9V9 463 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.11■□□□□ 0.17
CLCN4-201ENST00000380829 FHOD1Q9Y613 1164 aa16.11■□□□□ 0.17
CLCN4-201ENST00000380829 LONP1P36776 959 aaKnown RBP16.1■□□□□ 0.17
CLCN4-201ENST00000380829 ERCC6LQ2NKX8 1250 aa16.1■□□□□ 0.17
CLCN4-201ENST00000380829 DTHD1Q6ZMT9 781 aa16.1■□□□□ 0.17
CLCN4-201ENST00000380829 LRRC8AQ8IWT6 810 aa16.1■□□□□ 0.17
CLCN4-201ENST00000380829 FAM177A1Q8N128 213 aaPredicted RBP16.1■□□□□ 0.17
CLCN4-201ENST00000380829 REXO1Q8N1G1 1221 aaKnown RBP16.1■□□□□ 0.17
CLCN4-201ENST00000380829 IQUBQ8NA54 791 aa16.1■□□□□ 0.17
CLCN4-201ENST00000380829 ZNF277Q9NRM2 450 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms