RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 SLF1Q9BQI6 1058 aa20.89■□□□□ 0.93
HMGN1-203ENST00000380748 ABHD16BQ9H3Z7 469 aa20.89■□□□□ 0.93
HMGN1-203ENST00000380748 HCN4Q9Y3Q4 1203 aa20.89■□□□□ 0.93
HMGN1-203ENST00000380748 PIEZO1Q92508 2521 aa20.88■□□□□ 0.93
HMGN1-203ENST00000380748 ERC2O15083 957 aa20.88■□□□□ 0.93
HMGN1-203ENST00000380748 MBD4O95243 580 aa20.88■□□□□ 0.93
HMGN1-203ENST00000380748 CXCL17Q6UXB2 119 aa20.88■□□□□ 0.93
HMGN1-203ENST00000380748 ARMCX2Q7L311 632 aa20.88■□□□□ 0.93
HMGN1-203ENST00000380748 SLC43A3Q8NBI5 491 aa20.88■□□□□ 0.93
HMGN1-203ENST00000380748 IL1RAPL2Q9NP60 686 aa20.88■□□□□ 0.93
HMGN1-203ENST00000380748 ATP8A2Q9NTI2 1148 aa20.88■□□□□ 0.93
HMGN1-203ENST00000380748 PCDHA11Q9Y5I1 949 aa20.88■□□□□ 0.93
HMGN1-203ENST00000380748 ASTN1O14525 1302 aa20.87■□□□□ 0.93
HMGN1-203ENST00000380748 USP17L12C9JPN9 530 aa20.87■□□□□ 0.93
HMGN1-203ENST00000380748 USP17L21D6R901 530 aa20.87■□□□□ 0.93
HMGN1-203ENST00000380748 RFXAPO00287 272 aa20.87■□□□□ 0.93
HMGN1-203ENST00000380748 CPXCR1Q8N123 301 aa20.87■□□□□ 0.93
HMGN1-203ENST00000380748 NOC4LQ9BVI4 516 aaKnown RBP20.87■□□□□ 0.93
HMGN1-203ENST00000380748 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.87■□□□□ 0.93
HMGN1-203ENST00000380748 KATNBL1Q9H079 304 aa20.87■□□□□ 0.93
HMGN1-203ENST00000380748 WNT8AQ9H1J5 351 aa20.87■□□□□ 0.93
HMGN1-203ENST00000380748 ARIH1Q9Y4X5 557 aaPredicted RBP20.87■□□□□ 0.93
HMGN1-203ENST00000380748 SLC4A7Q9Y6M7 1214 aa20.87■□□□□ 0.93
HMGN1-203ENST00000380748 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.86■□□□□ 0.93
HMGN1-203ENST00000380748 NKX3-2P78367 333 aa20.86■□□□□ 0.93
HMGN1-203ENST00000380748 ZKSCAN2Q63HK3 967 aa20.86■□□□□ 0.93
HMGN1-203ENST00000380748 VWCEQ96DN2 955 aa20.86■□□□□ 0.93
HMGN1-203ENST00000380748 TRPV6Q9H1D0 765 aa20.86■□□□□ 0.93
HMGN1-203ENST00000380748 MTCH2Q9Y6C9 303 aa20.86■□□□□ 0.93
HMGN1-203ENST00000380748 GRIN2DO15399 1336 aa20.85■□□□□ 0.93
HMGN1-203ENST00000380748 LRRC37A2A6NM11 1700 aa20.85■□□□□ 0.93
HMGN1-203ENST00000380748 GREB1LQ9C091 1923 aaPredicted RBP20.85■□□□□ 0.93
HMGN1-203ENST00000380748 ZBBXA8MT70 800 aa20.85■□□□□ 0.93
HMGN1-203ENST00000380748 PTGS1P23219 599 aa20.85■□□□□ 0.93
HMGN1-203ENST00000380748 ITGA7Q13683 1181 aa20.85■□□□□ 0.93
HMGN1-203ENST00000380748 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.85■□□□□ 0.93
HMGN1-203ENST00000380748 ERC1Q8IUD2 1116 aa20.85■□□□□ 0.93
HMGN1-203ENST00000380748 CCDC144CPQ8IYA2 1237 aa20.85■□□□□ 0.93
HMGN1-203ENST00000380748 ANKRD35Q8N283 1001 aa20.85■□□□□ 0.93
HMGN1-203ENST00000380748 RAVER2Q9HCJ3 691 aaKnown RBP20.85■□□□□ 0.93
HMGN1-203ENST00000380748 MUC6Q6W4X9 2439 aa20.85■□□□□ 0.93
HMGN1-203ENST00000380748 ATP2A1O14983 1001 aa20.84■□□□□ 0.93
HMGN1-203ENST00000380748 NDUFB10O96000 172 aa20.84■□□□□ 0.93
HMGN1-203ENST00000380748 ATP2A2P16615 1042 aaKnown RBP20.84■□□□□ 0.93
HMGN1-203ENST00000380748 CEP85Q6P2H3 762 aa20.84■□□□□ 0.93
HMGN1-203ENST00000380748 AMOTL1Q8IY63 956 aa20.84■□□□□ 0.93
HMGN1-203ENST00000380748 PRPF38AQ8NAV1 312 aaKnown RBP20.84■□□□□ 0.93
HMGN1-203ENST00000380748 SCLYQ96I15 445 aa20.84■□□□□ 0.93
HMGN1-203ENST00000380748 CERS4Q9HA82 394 aa20.84■□□□□ 0.93
HMGN1-203ENST00000380748 EPOPA6NHQ4 379 aa20.83■□□□□ 0.93
HMGN1-203ENST00000380748 B4GALT4O60513 344 aa20.83■□□□□ 0.93
HMGN1-203ENST00000380748 CHGBP05060 677 aa20.83■□□□□ 0.93
HMGN1-203ENST00000380748 ADD2P35612 726 aa20.83■□□□□ 0.93
HMGN1-203ENST00000380748 CNTN2Q02246 1040 aa20.83■□□□□ 0.93
HMGN1-203ENST00000380748 TNFAIP2Q03169 654 aa20.83■□□□□ 0.93
HMGN1-203ENST00000380748 TMEM31Q5JXX7 168 aa20.83■□□□□ 0.93
HMGN1-203ENST00000380748 KRT40Q6A162 431 aa20.83■□□□□ 0.93
HMGN1-203ENST00000380748 NOL8Q76FK4 1167 aaKnown RBP20.83■□□□□ 0.93
HMGN1-203ENST00000380748 TLK2Q86UE8 772 aa20.83■□□□□ 0.93
HMGN1-203ENST00000380748 KHSRPQ92945 711 aaKnown RBP eCLIP20.83■□□□□ 0.931e-7■■□□□ 13.3
HMGN1-203ENST00000380748 F5H6K3 240 aa20.82■□□□□ 0.92
HMGN1-203ENST00000380748 ZBED4O75132 1171 aa20.82■□□□□ 0.92
HMGN1-203ENST00000380748 CA3P07451 260 aa20.82■□□□□ 0.92
HMGN1-203ENST00000380748 KLRC3Q07444 240 aa20.82■□□□□ 0.92
HMGN1-203ENST00000380748 TTLL4Q14679 1199 aa20.82■□□□□ 0.92
HMGN1-203ENST00000380748 CTR9Q6PD62 1173 aa20.82■□□□□ 0.92
HMGN1-203ENST00000380748 ITPRIPQ8IWB1 547 aa20.82■□□□□ 0.92
HMGN1-203ENST00000380748 RPUSD2Q8IZ73 545 aaKnown RBP20.82■□□□□ 0.92
HMGN1-203ENST00000380748 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.82■□□□□ 0.92
HMGN1-203ENST00000380748 KIFC2Q96AC6 838 aa20.82■□□□□ 0.92
HMGN1-203ENST00000380748 C11orf16Q9NQ32 467 aa20.82■□□□□ 0.92
HMGN1-203ENST00000380748 GNEQ9Y223 722 aaKnown RBP20.82■□□□□ 0.92
HMGN1-203ENST00000380748 CTDP1Q9Y5B0 961 aaPredicted RBP20.82■□□□□ 0.92
HMGN1-203ENST00000380748 ZBED9Q6R2W3 1325 aa20.81■□□□□ 0.92
HMGN1-203ENST00000380748 GTPBP6O43824 516 aaPredicted RBP20.81■□□□□ 0.92
HMGN1-203ENST00000380748 TLL1O43897 1013 aa20.81■□□□□ 0.92
HMGN1-203ENST00000380748 CABYRO75952 493 aa20.81■□□□□ 0.92
HMGN1-203ENST00000380748 RLBP1P12271 317 aa20.81■□□□□ 0.92
HMGN1-203ENST00000380748 POU3F3P20264 500 aaPredicted RBP20.81■□□□□ 0.92
HMGN1-203ENST00000380748 PSMC6P62333 389 aa20.81■□□□□ 0.92
HMGN1-203ENST00000380748 FSCN1Q16658 493 aaKnown RBP20.81■□□□□ 0.92
HMGN1-203ENST00000380748 RHPN1Q8TCX5 695 aa20.81■□□□□ 0.92
HMGN1-203ENST00000380748 AGBL1Q96MI9 1066 aa20.81■□□□□ 0.92
HMGN1-203ENST00000380748 SLC38A10Q9HBR0 1119 aa20.81■□□□□ 0.92
HMGN1-203ENST00000380748 HOMER2Q9NSB8 354 aa20.81■□□□□ 0.92
HMGN1-203ENST00000380748 FBXO40Q9UH90 709 aa20.81■□□□□ 0.92
HMGN1-203ENST00000380748 FAM86C2PA6NEL3 165 aa20.8■□□□□ 0.92
HMGN1-203ENST00000380748 TMEM67Q5HYA8 995 aa20.8■□□□□ 0.92
HMGN1-203ENST00000380748 CHST13Q8NET6 341 aa20.8■□□□□ 0.92
HMGN1-203ENST00000380748 DDRGK1Q96HY6 314 aa20.8■□□□□ 0.92
HMGN1-203ENST00000380748 NYAP2Q9P242 653 aa20.8■□□□□ 0.92
HMGN1-203ENST00000380748 COG5Q9UP83 839 aa20.8■□□□□ 0.92
HMGN1-203ENST00000380748 SLC4A4Q9Y6R1 1079 aa20.8■□□□□ 0.92
HMGN1-203ENST00000380748 DDX49Q9Y6V7 483 aaKnown RBP20.8■□□□□ 0.92
HMGN1-203ENST00000380748 ARHGEF15O94989 841 aa20.79■□□□□ 0.92
HMGN1-203ENST00000380748 RASA1P20936 1047 aa20.79■□□□□ 0.92
HMGN1-203ENST00000380748 FTSJ3Q8IY81 847 aaKnown RBP20.79■□□□□ 0.92
HMGN1-203ENST00000380748 BCL11AQ9H165 835 aa20.79■□□□□ 0.92
HMGN1-203ENST00000380748 PAG1Q9NWQ8 432 aa20.79■□□□□ 0.92
HMGN1-203ENST00000380748 SOWAHBA6NEL2 793 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms