RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 R3HCC1Q9Y3T6 440 aaKnown RBP13.62□□□□□ -0.23
USP3-202ENST00000380324 CLRN2A0PK11 232 aa13.62□□□□□ -0.23
USP3-202ENST00000380324 LONP1P36776 959 aaKnown RBP13.62□□□□□ -0.23
USP3-202ENST00000380324 FANCCQ00597 558 aa13.62□□□□□ -0.23
USP3-202ENST00000380324 SEPT2Q15019 361 aa13.62□□□□□ -0.23
USP3-202ENST00000380324 SMYD4Q8IYR2 804 aaPredicted RBP13.62□□□□□ -0.23
USP3-202ENST00000380324 TRIML1Q8N9V2 468 aa13.62□□□□□ -0.23
USP3-202ENST00000380324 TBCKQ8TEA7 893 aa13.62□□□□□ -0.23
USP3-202ENST00000380324 PSMD14O00487 310 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 NEMFO60524 1076 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 SERPINC1P01008 464 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 ADCY7P51828 1080 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 ICA1Q05084 483 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 DPYDQ12882 1025 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 GPATCH4Q5T3I0 446 aaKnown RBP13.61□□□□□ -0.23
USP3-202ENST00000380324 KLHL10Q6JEL2 608 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 TMC6Q7Z403 805 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 SH3RF1Q7Z6J0 888 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 NEK8Q86SG6 692 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 MLKLQ8NB16 471 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 SPATA20Q8TB22 786 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 CSRNP1Q96S65 589 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 DACH1Q9UI36 760 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
USP3-202ENST00000380324 TCP10L2B9ZVM9 353 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 USP17L10C9JJH3 530 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 PPP1R11O60927 126 aaPredicted RBP13.61□□□□□ -0.23
USP3-202ENST00000380324 STAT6P42226 847 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 PDXDC2PQ6P474 469 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 RTKN2Q8IZC4 609 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 FAM177A1Q8N128 213 aaPredicted RBP13.61□□□□□ -0.23
USP3-202ENST00000380324 PLIN2Q99541 437 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 NFE2L3Q9Y4A8 694 aa13.61□□□□□ -0.23
USP3-202ENST00000380324 MYH7BA7E2Y1 1941 aa13.6□□□□□ -0.23
USP3-202ENST00000380324 ESYT2A0FGR8 921 aa13.6□□□□□ -0.23
USP3-202ENST00000380324 hCG_1984214I3L0E3 225 aa13.6□□□□□ -0.23
USP3-202ENST00000380324 OR52Z1P0C646 297 aa13.6□□□□□ -0.23
USP3-202ENST00000380324 KCNA3P22001 575 aa13.6□□□□□ -0.23
USP3-202ENST00000380324 SLC1A4P43007 532 aa13.6□□□□□ -0.23
USP3-202ENST00000380324 PTPN21Q16825 1174 aa13.6□□□□□ -0.23
USP3-202ENST00000380324 RSBN1LQ6PCB5 846 aaPredicted RBP13.6□□□□□ -0.23
USP3-202ENST00000380324 LRRC8AQ8IWT6 810 aa13.6□□□□□ -0.23
USP3-202ENST00000380324 ZNF713Q8N859 430 aaPredicted RBP13.6□□□□□ -0.23
USP3-202ENST00000380324 DPF2Q92785 391 aa13.6□□□□□ -0.23
USP3-202ENST00000380324 KANSL2Q9H9L4 492 aa13.6□□□□□ -0.23
USP3-202ENST00000380324 DISC1Q9NRI5 854 aa13.6□□□□□ -0.23
USP3-202ENST00000380324 PNMA6FA0A0J9YX94 578 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 ZBTB7AO95365 584 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 TNNI2P48788 182 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 CUL4BQ13620 913 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 UBE2SQ16763 222 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 ABCB5Q2M3G0 1257 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 POTEDQ86YR6 584 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 MTRQ99707 1265 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 SPTLC3Q9NUV7 552 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 TMOD2Q9NZR1 351 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 KIF13BQ9NQT8 1826 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 ATRNL1Q5VV63 1379 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 SPDYE2BA6NHP3 402 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 SPDYE6P0CI01 402 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 UBA7P41226 1012 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 UBASH3AP57075 661 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 TATDN1Q6P1N9 297 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 TMEM179Q6ZVK1 233 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 PSMD1Q99460 953 aa13.59□□□□□ -0.23
USP3-202ENST00000380324 LAD1O00515 517 aa13.58□□□□□ -0.23
USP3-202ENST00000380324 ZBTB5O15062 677 aa13.58□□□□□ -0.23
USP3-202ENST00000380324 ENTPD3O75355 529 aa13.58□□□□□ -0.23
USP3-202ENST00000380324 GH2P01242 217 aa13.58□□□□□ -0.23
USP3-202ENST00000380324 CD44P16070 742 aaKnown RBP13.58□□□□□ -0.23
USP3-202ENST00000380324 STX17P56962 302 aa13.58□□□□□ -0.23
USP3-202ENST00000380324 PPP4R3BQ5MIZ7 849 aa13.58□□□□□ -0.23
USP3-202ENST00000380324 SLFN13Q68D06 897 aa13.58□□□□□ -0.23
USP3-202ENST00000380324 GSDMAQ96QA5 445 aa13.58□□□□□ -0.23
USP3-202ENST00000380324 NUP88Q99567 741 aaPredicted RBP13.58□□□□□ -0.23
USP3-202ENST00000380324 PYM1Q9BRP8 204 aaKnown RBP13.58□□□□□ -0.23
USP3-202ENST00000380324 SYNRGQ9UMZ2 1314 aa13.58□□□□□ -0.24
USP3-202ENST00000380324 NPM3O75607 178 aaKnown RBP13.58□□□□□ -0.24
USP3-202ENST00000380324 JAG1P78504 1218 aa13.58□□□□□ -0.24
USP3-202ENST00000380324 OGFOD1Q8N543 542 aa13.58□□□□□ -0.24
USP3-202ENST00000380324 MED15Q96RN5 788 aa13.58□□□□□ -0.24
USP3-202ENST00000380324 VEZTQ9HBM0 779 aa13.58□□□□□ -0.24
USP3-202ENST00000380324 TDP2O95551 362 aa13.57□□□□□ -0.24
USP3-202ENST00000380324 PRPHP41219 470 aa13.57□□□□□ -0.24
USP3-202ENST00000380324 TECP42680 631 aa13.57□□□□□ -0.24
USP3-202ENST00000380324 IKQ13123 557 aaPredicted RBP13.57□□□□□ -0.24
USP3-202ENST00000380324 RRP1BQ14684 758 aaKnown RBP13.57□□□□□ -0.24
USP3-202ENST00000380324 DLGAP5Q15398 846 aa13.57□□□□□ -0.24
USP3-202ENST00000380324 SAMSN1Q9NSI8 373 aaKnown RBP13.57□□□□□ -0.24
USP3-202ENST00000380324 NYAP2Q9P242 653 aa13.57□□□□□ -0.24
USP3-202ENST00000380324 PPP1R1BQ9UD71 204 aaPredicted RBP13.57□□□□□ -0.24
USP3-202ENST00000380324 TMEM232C9JQI7 657 aa13.57□□□□□ -0.24
USP3-202ENST00000380324 GTPBP6O43824 516 aaPredicted RBP13.57□□□□□ -0.24
USP3-202ENST00000380324 SLC37A4O43826 429 aa13.57□□□□□ -0.24
USP3-202ENST00000380324 SKILP12757 684 aa13.57□□□□□ -0.24
USP3-202ENST00000380324 CDK11BP21127 795 aaKnown RBP13.57□□□□□ -0.24
USP3-202ENST00000380324 GSDMDP57764 484 aa13.57□□□□□ -0.24
USP3-202ENST00000380324 SNAP25P60880 206 aa13.57□□□□□ -0.24
USP3-202ENST00000380324 QRICH1Q2TAL8 776 aa13.57□□□□□ -0.24
USP3-202ENST00000380324 NAALADL2Q58DX5 795 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms