RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 CHADLQ6NUI6 762 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 TMEM139Q8IV31 216 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 SLF2Q8IX21 1173 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 DAGLBQ8NCG7 672 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 LRRC15Q8TF66 581 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 PIGSQ96S52 555 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 PLIN2Q99541 437 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 SPZ1Q9BXG8 430 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 COA1Q9GZY4 146 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 TTF2Q9UNY4 1162 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 PAXBP1Q9Y5B6 917 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 FRMPD2Q68DX3 1309 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 A6NJR5 290 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 AKR1B1P15121 316 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 LONP1P36776 959 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 NOVP48745 357 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 MNX1P50219 401 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 NAPAP54920 295 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 ADKP55263 362 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 GABPAQ06546 454 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 NR1I3Q14994 352 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 NAALADL2Q58DX5 795 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 LRRC47Q8N1G4 583 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 CCDC148Q8NFR7 591 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 ZC3H12CQ9C0D7 883 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 ZMYND12Q9H0C1 365 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 SYNRGQ9UMZ2 1314 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 QSER1Q2KHR3 1735 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 SMCO2A6NFE2 343 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 SPATA1Q5VX52 437 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 CCDC112Q8NEF3 446 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 AKT1S1Q96B36 256 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 CCDC34Q96HJ3 373 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 PCDHAC2Q9Y5I4 1007 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 PSDA5PKW4 1024 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 PDHBP11177 359 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 MSL1Q68DK7 614 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 DPP8Q6V1X1 898 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 DTHD1Q6ZMT9 781 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 TC2NQ8N9U0 490 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 LZTS2Q9BRK4 669 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 MTMR4Q9NYA4 1195 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 CTNND2Q9UQB3 1225 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 MAPK8IP1Q9UQF2 711 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 A0A1B0GTH6 734 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 MMP10P09238 476 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 NPR1P16066 1061 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 LETM2Q2VYF4 491 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 CDKAL1Q5VV42 579 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 SPECC1LQ69YQ0 1117 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 GALNT17Q6IS24 598 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 TMC4Q7Z404 712 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 NLGN1Q8N2Q7 840 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 RRP36Q96EU6 259 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 DISC1Q9NRI5 854 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 USP40Q9NVE5 1235 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 TMEM260Q9NX78 707 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 MYH4Q9Y623 1939 aa9.01□□□□□ -0.97
PDLIM5-204ENST00000380176 SCN9AQ15858 1988 aa9□□□□□ -0.97
PDLIM5-204ENST00000380176 STAT6P42226 847 aa9□□□□□ -0.97
PDLIM5-204ENST00000380176 KCNJ6P48051 423 aa9□□□□□ -0.97
PDLIM5-204ENST00000380176 NCBP1Q09161 790 aaKnown RBP9□□□□□ -0.97
PDLIM5-204ENST00000380176 NFIAQ12857 509 aa9□□□□□ -0.97
PDLIM5-204ENST00000380176 RRAGBQ5VZM2 374 aa9□□□□□ -0.97
PDLIM5-204ENST00000380176 CDC42EP5Q6NZY7 148 aa9□□□□□ -0.97
PDLIM5-204ENST00000380176 ZFPM1Q8IX07 1006 aa9□□□□□ -0.97
PDLIM5-204ENST00000380176 SECISBP2LQ93073 1101 aaKnown RBP9□□□□□ -0.97
PDLIM5-204ENST00000380176 COA7Q96BR5 231 aa9□□□□□ -0.97
PDLIM5-204ENST00000380176 DBNDD1Q9H9R9 158 aa9□□□□□ -0.97
PDLIM5-204ENST00000380176 BIN2Q9UBW5 565 aaPredicted RBP9□□□□□ -0.97
PDLIM5-204ENST00000380176 GDAQ9Y2T3 454 aa9□□□□□ -0.97
PDLIM5-204ENST00000380176 GTF3C5Q9Y5Q8 519 aaPredicted RBP9□□□□□ -0.97
PDLIM5-204ENST00000380176 CCNT1O60563 726 aaKnown RBP9□□□□□ -0.97
PDLIM5-204ENST00000380176 APBA3O96018 575 aa9□□□□□ -0.97
PDLIM5-204ENST00000380176 RPN1P04843 607 aaKnown RBP9□□□□□ -0.97
PDLIM5-204ENST00000380176 PYGBP11216 843 aa9□□□□□ -0.97
PDLIM5-204ENST00000380176 JAKMIP3Q5VZ66 844 aa9□□□□□ -0.97
PDLIM5-204ENST00000380176 APOBEC3HQ6NTF7 200 aaKnown RBP9□□□□□ -0.97
PDLIM5-204ENST00000380176 SYT10Q6XYQ8 523 aa9□□□□□ -0.97
PDLIM5-204ENST00000380176 RIOX1Q9H6W3 641 aa9□□□□□ -0.97
PDLIM5-204ENST00000380176 PRDM10Q9NQV6 1147 aa9□□□□□ -0.97
PDLIM5-204ENST00000380176 IGKV6D-41A0A0C4DH26 115 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 FANCGO15287 622 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 SHROOM1Q2M3G4 852 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 REXO1L1PQ8IX06 675 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 ANKRD7Q92527 254 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 CCDC97Q96F63 343 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 GPCPD1Q9NPB8 672 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 ADD3Q9UEY8 706 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 SEC63Q9UGP8 760 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 PLIN4Q96Q06 1357 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 EDIL3O43854 480 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 SHMT1P34896 483 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 TXLNAP40222 546 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 PRCPP42785 496 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 CACNB3P54284 484 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 DHX8Q14562 1220 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 NONOQ15233 471 aaKnown RBP eCLIP8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 CT47A1Q5JQC4 288 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 KIF18AQ8NI77 898 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms