RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 NEDD4P46934 1319 aa5.53□□□□□ -1.52
C9orf72-203ENST00000380003 SNAI1O95863 264 aaPredicted RBP5.53□□□□□ -1.52
C9orf72-203ENST00000380003 C6orf222P0C671 652 aaPredicted RBP5.53□□□□□ -1.52
C9orf72-203ENST00000380003 BMP3P12645 472 aa5.53□□□□□ -1.52
C9orf72-203ENST00000380003 PDE4AP27815 886 aa5.53□□□□□ -1.52
C9orf72-203ENST00000380003 PDE4BQ07343 736 aa5.53□□□□□ -1.52
C9orf72-203ENST00000380003 PRPF38AQ8NAV1 312 aaKnown RBP5.53□□□□□ -1.52
C9orf72-203ENST00000380003 TBC1D5Q92609 795 aa5.53□□□□□ -1.52
C9orf72-203ENST00000380003 EVI5LQ96CN4 794 aa5.53□□□□□ -1.52
C9orf72-203ENST00000380003 TINF2Q9BSI4 451 aa5.53□□□□□ -1.52
C9orf72-203ENST00000380003 XPNPEP3Q9NQH7 507 aa5.53□□□□□ -1.52
C9orf72-203ENST00000380003 MCM3APO60318 1980 aa5.53□□□□□ -1.52
C9orf72-203ENST00000380003 BAZ2BQ9UIF8 2168 aaKnown RBP5.53□□□□□ -1.52
C9orf72-203ENST00000380003 B4E1Z4 1266 aa5.53□□□□□ -1.52
C9orf72-203ENST00000380003 NFIBO00712 420 aa5.53□□□□□ -1.52
C9orf72-203ENST00000380003 SDSP20132 328 aa5.53□□□□□ -1.52
C9orf72-203ENST00000380003 LRRC41Q15345 812 aa5.53□□□□□ -1.52
C9orf72-203ENST00000380003 MCMDC2Q4G0Z9 681 aa5.53□□□□□ -1.52
C9orf72-203ENST00000380003 SBK1Q52WX2 424 aa5.53□□□□□ -1.52
C9orf72-203ENST00000380003 RAB11FIP4Q86YS3 637 aa5.53□□□□□ -1.52
C9orf72-203ENST00000380003 BADQ92934 168 aa5.53□□□□□ -1.52
C9orf72-203ENST00000380003 TEX13BQ9BXU2 312 aa5.53□□□□□ -1.52
C9orf72-203ENST00000380003 ZNF536O15090 1300 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 IGKV6D-41A0A0C4DH26 115 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 SEPT4O43236 478 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 KDM4AO75164 1064 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 ZFYP08048 801 aaPredicted RBP5.52□□□□□ -1.53
C9orf72-203ENST00000380003 COL6A1P12109 1028 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 GSPT1P15170 499 aaKnown RBP5.52□□□□□ -1.53
C9orf72-203ENST00000380003 STAT2P52630 851 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 EPHB4P54760 987 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 TLE2Q04725 743 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 CCDC144BQ3MJ40 725 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 FBXO16Q8IX29 292 aaPredicted RBP5.52□□□□□ -1.53
C9orf72-203ENST00000380003 GDF15Q99988 308 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 TMEM47Q9BQJ4 181 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 SH2D4AQ9H788 454 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 SENP2Q9HC62 589 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 PRR12Q9ULL5 1215 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 ADAMTS5Q9UNA0 930 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 MYH7P12883 1935 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 DNAH14Q0VDD8 3507 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 TRIM43BA6NCK2 446 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 STRNO43815 780 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 CALML3P27482 149 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 RTP1P59025 263 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 HDAC1Q13547 482 aaPredicted RBP5.52□□□□□ -1.53
C9orf72-203ENST00000380003 ZNF792Q3KQV3 632 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 FAM109BQ6ICB4 259 aaPredicted RBP5.52□□□□□ -1.53
C9orf72-203ENST00000380003 RIOX2Q8IUF8 465 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 DEFB123Q8N688 67 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 NEDD1Q8NHV4 660 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 TRIM43Q96BQ3 446 aaPredicted RBP5.52□□□□□ -1.53
C9orf72-203ENST00000380003 FGD4Q96M96 766 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 TRERF1Q96PN7 1200 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 PPP1R12CQ9BZL4 782 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 PRO3102Q9H379 93 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 MROH8Q9H579 483 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 SLC38A10Q9HBR0 1119 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 A1CFQ9NQ94 594 aaKnown RBP5.52□□□□□ -1.53
C9orf72-203ENST00000380003 FOXD4L1Q9NU39 408 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 NYAP2Q9P242 653 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 CNPY2Q9Y2B0 182 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 RBBP6Q7Z6E9 1792 aaKnown RBP5.52□□□□□ -1.53
C9orf72-203ENST00000380003 PTPDC1A2A3K4 754 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 HOXC6P09630 235 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 ZNF865P0CJ78 1059 aaPredicted RBP5.52□□□□□ -1.53
C9orf72-203ENST00000380003 ACRP10323 421 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 RARBP10826 455 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 GNAT2P19087 354 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 PSMC6P62333 389 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 SHHQ15465 462 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 KCNA10Q16322 511 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 GNASQ5JWF2 1037 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 CXCL17Q6UXB2 119 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 CMTR1Q8N1G2 835 aaKnown RBP5.52□□□□□ -1.53
C9orf72-203ENST00000380003 GCC1Q96CN9 775 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 RWDD1Q9H446 243 aaPredicted RBP5.52□□□□□ -1.53
C9orf72-203ENST00000380003 GPHNQ9NQX3 736 aaPredicted RBP5.52□□□□□ -1.53
C9orf72-203ENST00000380003 RNF146Q9NTX7 359 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 GINM1Q9NU53 330 aa5.52□□□□□ -1.53
C9orf72-203ENST00000380003 ZNFX1Q9P2E3 1918 aaKnown RBP5.51□□□□□ -1.53
C9orf72-203ENST00000380003 GRXCR1A8MXD5 290 aa5.51□□□□□ -1.53
C9orf72-203ENST00000380003 DHX16O60231 1041 aaKnown RBP5.51□□□□□ -1.53
C9orf72-203ENST00000380003 DTNBO60941 627 aa5.51□□□□□ -1.53
C9orf72-203ENST00000380003 ZBED4O75132 1171 aa5.51□□□□□ -1.53
C9orf72-203ENST00000380003 PPFIA3O75145 1194 aa5.51□□□□□ -1.53
C9orf72-203ENST00000380003 NUCB1Q02818 461 aa5.51□□□□□ -1.53
C9orf72-203ENST00000380003 RCSD1Q6JBY9 416 aa5.51□□□□□ -1.53
C9orf72-203ENST00000380003 SLC39A5Q6ZMH5 540 aa5.51□□□□□ -1.53
C9orf72-203ENST00000380003 ARMCX2Q7L311 632 aa5.51□□□□□ -1.53
C9orf72-203ENST00000380003 SMC5Q8IY18 1101 aa5.51□□□□□ -1.53
C9orf72-203ENST00000380003 DIAPH3Q9NSV4 1193 aa5.51□□□□□ -1.53
C9orf72-203ENST00000380003 CCPG1Q9ULG6 757 aa5.51□□□□□ -1.53
C9orf72-203ENST00000380003 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.51□□□□□ -1.53
C9orf72-203ENST00000380003 UMODL1Q5DID0 1318 aa5.51□□□□□ -1.53
C9orf72-203ENST00000380003 SOWAHBA6NEL2 793 aa5.51□□□□□ -1.53
C9orf72-203ENST00000380003 KBTBD13C9JR72 458 aa5.51□□□□□ -1.53
C9orf72-203ENST00000380003 RXRAP19793 462 aa5.51□□□□□ -1.53
C9orf72-203ENST00000380003 PTH1RQ03431 593 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms