RNA–Protein interactions for RNA: ENST00000379404.5

SMS-201, Transcript of spermine synthase, humanhuman

TSL 3 BASIC

Gene SMS, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-201ENST00000379404 FRMPD2Q68DX3 1309 aaPredicted RBP17.28■□□□□ 0.36
SMS-201ENST00000379404 COL6A1P12109 1028 aa17.28■□□□□ 0.36
SMS-201ENST00000379404 IKQ13123 557 aaPredicted RBP17.28■□□□□ 0.36
SMS-201ENST00000379404 CCDC96Q2M329 555 aa17.28■□□□□ 0.36
SMS-201ENST00000379404 SYDE2Q5VT97 1194 aa17.28■□□□□ 0.36
SMS-201ENST00000379404 MAMDC4Q6UXC1 1216 aa17.28■□□□□ 0.36
SMS-201ENST00000379404 STOX1Q6ZVD7 989 aa17.28■□□□□ 0.36
SMS-201ENST00000379404 ESYT1Q9BSJ8 1104 aa17.28■□□□□ 0.36
SMS-201ENST00000379404 GPCPD1Q9NPB8 672 aa17.28■□□□□ 0.36
SMS-201ENST00000379404 ISY1Q9ULR0 285 aaKnown RBP17.28■□□□□ 0.36
SMS-201ENST00000379404 CEP290O15078 2479 aa17.27■□□□□ 0.36
SMS-201ENST00000379404 TNKSO95271 1327 aa17.27■□□□□ 0.36
SMS-201ENST00000379404 ICAM1P05362 532 aa17.27■□□□□ 0.36
SMS-201ENST00000379404 TAL1P17542 331 aaPredicted RBP17.27■□□□□ 0.36
SMS-201ENST00000379404 SLC4A3P48751 1232 aa17.27■□□□□ 0.36
SMS-201ENST00000379404 TKFCQ3LXA3 575 aa17.27■□□□□ 0.36
SMS-201ENST00000379404 CCDC174Q6PII3 467 aa17.27■□□□□ 0.36
SMS-201ENST00000379404 NECAB2Q7Z6G3 386 aa17.27■□□□□ 0.36
SMS-201ENST00000379404 ZNF467Q7Z7K2 595 aaPredicted RBP17.27■□□□□ 0.36
SMS-201ENST00000379404 MSL3Q8N5Y2 521 aaKnown RBP17.27■□□□□ 0.36
SMS-201ENST00000379404 PNMA1Q8ND90 353 aa17.27■□□□□ 0.36
SMS-201ENST00000379404 DDX11Q96FC9 970 aa17.27■□□□□ 0.36
SMS-201ENST00000379404 CCDC136Q96JN2 1154 aa17.27■□□□□ 0.36
SMS-201ENST00000379404 NRBP1Q9UHY1 535 aa17.27■□□□□ 0.36
SMS-201ENST00000379404 E7EWF7 191 aa17.26■□□□□ 0.35
SMS-201ENST00000379404 SEPT4O43236 478 aa17.26■□□□□ 0.35
SMS-201ENST00000379404 MSCO60682 206 aa17.26■□□□□ 0.35
SMS-201ENST00000379404 SNAI1O95863 264 aaPredicted RBP17.26■□□□□ 0.35
SMS-201ENST00000379404 ZNF865P0CJ78 1059 aaPredicted RBP17.26■□□□□ 0.35
SMS-201ENST00000379404 MUM1L1Q5H9M0 696 aa17.26■□□□□ 0.35
SMS-201ENST00000379404 FAM133AQ8N9E0 248 aa17.26■□□□□ 0.35
SMS-201ENST00000379404 TRERF1Q96PN7 1200 aa17.26■□□□□ 0.35
SMS-201ENST00000379404 HTATIP2Q9BUP3 242 aa17.26■□□□□ 0.35
SMS-201ENST00000379404 ACAD9Q9H845 621 aa17.26■□□□□ 0.35
SMS-201ENST00000379404 A1CFQ9NQ94 594 aaKnown RBP17.26■□□□□ 0.35
SMS-201ENST00000379404 HOMER2Q9NSB8 354 aa17.26■□□□□ 0.35
SMS-201ENST00000379404 RNF146Q9NTX7 359 aa17.26■□□□□ 0.35
SMS-201ENST00000379404 RBM8AQ9Y5S9 174 aaKnown RBP17.26■□□□□ 0.35
SMS-201ENST00000379404 FRMPD3Q5JV73 1810 aa17.26■□□□□ 0.35
SMS-201ENST00000379404 PFASO15067 1338 aa17.25■□□□□ 0.35
SMS-201ENST00000379404 GOLGA8HP0CJ92 632 aa17.25■□□□□ 0.35
SMS-201ENST00000379404 ALAS1P13196 640 aa17.25■□□□□ 0.35
SMS-201ENST00000379404 CNGA1P29973 690 aa17.25■□□□□ 0.35
SMS-201ENST00000379404 CNTN2Q02246 1040 aa17.25■□□□□ 0.35
SMS-201ENST00000379404 GPATCH4Q5T3I0 446 aaKnown RBP17.25■□□□□ 0.35
SMS-201ENST00000379404 ANKRD35Q8N283 1001 aa17.25■□□□□ 0.35
SMS-201ENST00000379404 DPF3Q92784 378 aa17.25■□□□□ 0.35
SMS-201ENST00000379404 KAT14Q9H8E8 782 aa17.25■□□□□ 0.35
SMS-201ENST00000379404 SYNGAP1Q96PV0 1343 aa17.24■□□□□ 0.35
SMS-201ENST00000379404 ALPK3Q96L96 1907 aa17.24■□□□□ 0.35
SMS-201ENST00000379404 SOWAHBA6NEL2 793 aa17.24■□□□□ 0.35
SMS-201ENST00000379404 H0YGN5 161 aa17.24■□□□□ 0.35
SMS-201ENST00000379404 NECTIN1Q15223 517 aa17.24■□□□□ 0.35
SMS-201ENST00000379404 UBAC1Q9BSL1 405 aa17.24■□□□□ 0.35
SMS-201ENST00000379404 UBA5Q9GZZ9 404 aa17.24■□□□□ 0.35
SMS-201ENST00000379404 CPVLQ9H3G5 476 aa17.24■□□□□ 0.35
SMS-201ENST00000379404 C11orf49Q9H6J7 331 aa17.24■□□□□ 0.35
SMS-201ENST00000379404 SENP2Q9HC62 589 aa17.24■□□□□ 0.35
SMS-201ENST00000379404 CCPG1Q9ULG6 757 aa17.24■□□□□ 0.35
SMS-201ENST00000379404 ASTN1O14525 1302 aa17.23■□□□□ 0.35
SMS-201ENST00000379404 ANTXR2P58335 489 aa17.23■□□□□ 0.35
SMS-201ENST00000379404 COL9A3Q14050 684 aaPredicted RBP17.23■□□□□ 0.35
SMS-201ENST00000379404 MB21D2Q8IYB1 491 aaPredicted RBP17.23■□□□□ 0.35
SMS-201ENST00000379404 NCOA7Q8NI08 942 aa17.23■□□□□ 0.35
SMS-201ENST00000379404 CLEC4DQ8WXI8 215 aa17.23■□□□□ 0.35
SMS-201ENST00000379404 KATNBL1Q9H079 304 aa17.23■□□□□ 0.35
SMS-201ENST00000379404 CYP39A1Q9NYL5 469 aa17.23■□□□□ 0.35
SMS-201ENST00000379404 DNAH12Q6ZR08 3092 aa17.23■□□□□ 0.35
SMS-201ENST00000379404 TRDNQ13061 729 aa17.22■□□□□ 0.35
SMS-201ENST00000379404 ASPRV1Q53RT3 343 aa17.22■□□□□ 0.35
SMS-201ENST00000379404 IFIT1BQ5T764 474 aaKnown RBP17.22■□□□□ 0.35
SMS-201ENST00000379404 ANO1Q5XXA6 986 aa17.22■□□□□ 0.35
SMS-201ENST00000379404 KIAA1211Q6ZU35 1233 aa17.22■□□□□ 0.35
SMS-201ENST00000379404 IGDCC4Q8TDY8 1250 aa17.22■□□□□ 0.35
SMS-201ENST00000379404 WDR19Q8NEZ3 1342 aa17.21■□□□□ 0.35
SMS-201ENST00000379404 POTEB2H3BUK9 544 aa17.21■□□□□ 0.35
SMS-201ENST00000379404 SLC27A2O14975 620 aa17.21■□□□□ 0.35
SMS-201ENST00000379404 CHST3Q7LGC8 479 aa17.21■□□□□ 0.35
SMS-201ENST00000379404 ADGRF4Q8IZF3 695 aa17.21■□□□□ 0.35
SMS-201ENST00000379404 STAG2Q8N3U4 1231 aa17.21■□□□□ 0.35
SMS-201ENST00000379404 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.21■□□□□ 0.35
SMS-201ENST00000379404 LCTP09848 1927 aa17.2■□□□□ 0.34
SMS-201ENST00000379404 PALM3A6NDB9 673 aaPredicted RBP17.2■□□□□ 0.34
SMS-201ENST00000379404 DNM1LO00429 736 aa17.2■□□□□ 0.34
SMS-201ENST00000379404 NFIBO00712 420 aa17.2■□□□□ 0.34
SMS-201ENST00000379404 IFIT3O14879 490 aaKnown RBP17.2■□□□□ 0.34
SMS-201ENST00000379404 PARP1P09874 1014 aaKnown RBP17.2■□□□□ 0.34
SMS-201ENST00000379404 TROAPQ12815 778 aa17.2■□□□□ 0.34
SMS-201ENST00000379404 SLC35G1Q2M3R5 365 aa17.2■□□□□ 0.34
SMS-201ENST00000379404 CREB3L3Q68CJ9 461 aa17.2■□□□□ 0.34
SMS-201ENST00000379404 ARMCX2Q7L311 632 aa17.2■□□□□ 0.34
SMS-201ENST00000379404 CCDC144CPQ8IYA2 1237 aa17.2■□□□□ 0.34
SMS-201ENST00000379404 ARRDC4Q8NCT1 418 aa17.2■□□□□ 0.34
SMS-201ENST00000379404 MORC4Q8TE76 937 aa17.2■□□□□ 0.34
SMS-201ENST00000379404 MTMR8Q96EF0 704 aa17.2■□□□□ 0.34
SMS-201ENST00000379404 PURBQ96QR8 312 aaKnown RBP17.2■□□□□ 0.34
SMS-201ENST00000379404 JMJD4Q9H9V9 463 aa17.2■□□□□ 0.34
SMS-201ENST00000379404 MAD2L2Q9UI95 211 aa17.2■□□□□ 0.34
SMS-201ENST00000379404 PNMA2Q9UL42 364 aa17.2■□□□□ 0.34
SMS-201ENST00000379404 CNPY2Q9Y2B0 182 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms