RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 SNX25Q9H3E2 840 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 PPIP5K2O43314 1243 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 ATF2P15336 505 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 KCNH3Q9ULD8 1083 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 KLHL30Q0D2K2 578 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 TCP10Q12799 353 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 CCHCR1Q8TD31 782 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 PIK3AP1Q6ZUJ8 805 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 TRIM4Q9C037 500 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 ANKRD36BQ8N2N9 1353 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 CFBP00751 764 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 DHX38Q92620 1227 aaKnown RBP12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 RPGRIP1Q96KN7 1286 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 DISC1Q9NRI5 854 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 SCAF11Q99590 1463 aaKnown RBP12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 K7ENM7 598 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 ZSCAN20P17040 1043 aaPredicted RBP12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 ADCY8P40145 1251 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 TMX3Q96JJ7 454 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 NOLC1Q14978 699 aaKnown RBP eCLIP12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 POLR3CQ9BUI4 534 aaPredicted RBP12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 HELLSQ9NRZ9 838 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 AATFQ9NY61 560 aaKnown RBP eCLIP12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 GRIN1Q05586 938 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 KLHL40Q2TBA0 621 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 SNX29Q8TEQ0 813 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 ARHGEF1Q92888 912 aaKnown RBP12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 ABHD8Q96I13 439 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 PAGR1Q9BTK6 254 aa12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 ZHX1Q9UKY1 873 aaPredicted RBP12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 MRPL11Q9Y3B7 192 aaKnown RBP12.25□□□□□ -0.45
PTCHD1-201ENST00000379361 PPIP5K1Q6PFW1 1433 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 LONRF2Q1L5Z9 754 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 ACRBPQ8NEB7 543 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 MMTAG2Q9BU76 263 aaKnown RBP12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 TIAM1Q13009 1591 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 F13A1P00488 732 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 POSTNQ15063 836 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 TTC38Q5R3I4 469 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 ASXL1Q8IXJ9 1541 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 BZW2Q9Y6E2 419 aaKnown RBP12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 RAPH1Q70E73 1250 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 KDRP35968 1356 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 H3BRJ5 948 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 SYT10Q6XYQ8 523 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 TRIM59Q8IWR1 403 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 FBXL13Q8NEE6 735 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 RNF139Q8WU17 664 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 ESYT1Q9BSJ8 1104 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 SYTL2Q9HCH5 934 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 STK38LQ9Y2H1 464 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 LMBR1LQ6UX01 489 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 FLAD1Q8NFF5 587 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 JARID2Q92833 1246 aaPredicted RBP12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 RASSF4Q9H2L5 321 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 KRT82Q9NSB4 513 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 NFKBIL1Q9UBC1 381 aaPredicted RBP12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 FLOT2Q14254 428 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 FRA10AC1Q70Z53 315 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 SFMBT1Q9UHJ3 866 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 FNDC3AQ9Y2H6 1198 aaKnown RBP12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 ART3Q13508 389 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 PCDHB13Q9Y5F0 798 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 M0R2C6 588 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 SNX19Q92543 992 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 EPAS1Q99814 870 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 BPIFB4P59827 614 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 ARHGAP27Q6ZUM4 889 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 LSM14BQ9BX40 385 aaKnown RBP12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 HGSO14964 777 aaPredicted RBP12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 NSFP46459 744 aaKnown RBP12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 NELFBQ8WX92 580 aa12.24□□□□□ -0.45
PTCHD1-201ENST00000379361 ANKRD36BP1Q96IX9 119 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 SRPK1Q96SB4 655 aaKnown RBP12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 WDR17Q8IZU2 1322 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 MYL5Q02045 173 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 LCA5Q86VQ0 697 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 AKT3Q9Y243 479 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 RXRAP19793 462 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 RECQLP46063 649 aaPredicted RBP12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 HSP90AA5PQ58FG0 334 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 HP1BP3Q5SSJ5 553 aaPredicted RBP12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 GDAP1Q8TB36 358 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 CEP19Q96LK0 163 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 SLC38A10Q9HBR0 1119 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 APOBRQ0VD83 1088 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 ENOX1Q8TC92 643 aaKnown RBP12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 HPCAL4Q9UM19 191 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 SRGAP2CP0DJJ0 459 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 SESN3P58005 492 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 INHBAP08476 426 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 ANO1Q5XXA6 986 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 FAM178BQ8IXR5 827 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 POLGP54098 1239 aaPredicted RBP12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 PPP1R2P3Q6NXS1 205 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 ZNF215Q9UL58 517 aaPredicted RBP12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 TXKP42681 527 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 ADALQ6DHV7 355 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 KLHL7Q8IXQ5 586 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms