RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 LONRF3Q496Y0 759 aa15.83■□□□□ 0.13
SHROOM1-203ENST00000378679 SENP2Q9HC62 589 aa15.83■□□□□ 0.13
SHROOM1-203ENST00000378679 STK36Q9NRP7 1315 aa15.83■□□□□ 0.13
SHROOM1-203ENST00000378679 RDXP35241 583 aaKnown RBP15.83■□□□□ 0.12
SHROOM1-203ENST00000378679 RCAN1P53805 252 aa15.83■□□□□ 0.12
SHROOM1-203ENST00000378679 KRT222Q8N1A0 295 aa15.83■□□□□ 0.12
SHROOM1-203ENST00000378679 NEDD1Q8NHV4 660 aa15.83■□□□□ 0.12
SHROOM1-203ENST00000378679 ERLIN2O94905 339 aa15.83■□□□□ 0.12
SHROOM1-203ENST00000378679 GUCY1A2P33402 732 aa15.83■□□□□ 0.12
SHROOM1-203ENST00000378679 SYT10Q6XYQ8 523 aa15.83■□□□□ 0.12
SHROOM1-203ENST00000378679 C11orf57Q6ZUT1 292 aaPredicted RBP15.83■□□□□ 0.12
SHROOM1-203ENST00000378679 TBC1D5Q92609 795 aa15.83■□□□□ 0.12
SHROOM1-203ENST00000378679 TIGD1Q96MW7 591 aa15.83■□□□□ 0.12
SHROOM1-203ENST00000378679 MXD3Q9BW11 206 aa15.83■□□□□ 0.12
SHROOM1-203ENST00000378679 GUCA1BQ9UMX6 200 aa15.83■□□□□ 0.12
SHROOM1-203ENST00000378679 TESPA1A2RU30 521 aaPredicted RBP15.82■□□□□ 0.12
SHROOM1-203ENST00000378679 PHACTR2O75167 634 aa15.82■□□□□ 0.12
SHROOM1-203ENST00000378679 SLFN14P0C7P3 912 aa15.82■□□□□ 0.12
SHROOM1-203ENST00000378679 UBXN2AP68543 259 aa15.82■□□□□ 0.12
SHROOM1-203ENST00000378679 PFKFB3Q16875 520 aaPredicted RBP15.82■□□□□ 0.12
SHROOM1-203ENST00000378679 MYCT1Q8N699 235 aa15.82■□□□□ 0.12
SHROOM1-203ENST00000378679 EHBP1Q8NDI1 1231 aa15.82■□□□□ 0.12
SHROOM1-203ENST00000378679 CCDC172P0C7W6 258 aa15.82■□□□□ 0.12
SHROOM1-203ENST00000378679 CDR1P51861 262 aa15.82■□□□□ 0.12
SHROOM1-203ENST00000378679 KRT83P78385 493 aa15.82■□□□□ 0.12
SHROOM1-203ENST00000378679 UBE2SQ16763 222 aa15.82■□□□□ 0.12
SHROOM1-203ENST00000378679 GPBP1Q86WP2 473 aa15.82■□□□□ 0.12
SHROOM1-203ENST00000378679 PLA2G4DQ86XP0 818 aa15.82■□□□□ 0.12
SHROOM1-203ENST00000378679 NWD1Q149M9 1564 aa15.82■□□□□ 0.12
SHROOM1-203ENST00000378679 COL23A1Q86Y22 540 aaPredicted RBP15.82■□□□□ 0.12
SHROOM1-203ENST00000378679 PAGR1Q9BTK6 254 aa15.82■□□□□ 0.12
SHROOM1-203ENST00000378679 GSDMAQ96QA5 445 aa15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 KIF1AQ12756 1690 aa15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 KRT86O43790 486 aa15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 RPN1P04843 607 aaKnown RBP15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 AKR1B1P15121 316 aa15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 PTPREP23469 700 aa15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 STAT2P52630 851 aa15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 PRPF4BQ13523 1007 aaKnown RBP15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 NLRX1Q86UT6 975 aa15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 CWC15Q9P013 229 aaKnown RBP15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 IMPACTQ9P2X3 320 aa15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 PNMA6FA0A0J9YX94 578 aa15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 H0YHG0 523 aa15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 ZNF500O60304 480 aaPredicted RBP15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 SNAP25P60880 206 aa15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 RAPGEF1Q13905 1077 aa15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 SMYD4Q8IYR2 804 aaPredicted RBP15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 STAG2Q8N3U4 1231 aa15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 DCPSQ96C86 337 aaKnown RBP15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 MRPL44Q9H9J2 332 aaKnown RBP15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 FRMD4BQ9Y2L6 1034 aa15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 SUGT1Q9Y2Z0 365 aa15.81■□□□□ 0.12
SHROOM1-203ENST00000378679 KDM3AQ9Y4C1 1321 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 MON2Q7Z3U7 1717 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 LAD1O00515 517 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 GCNT3O95395 438 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 SPECC1LQ69YQ0 1117 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 DEFB132Q7Z7B7 95 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 SLFN12Q8IYM2 578 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 SLC39A2Q9NP94 309 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 STK24Q9Y6E0 443 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 PIK3C2AO00443 1686 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 EPB41P11171 864 aaKnown RBP15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 LMAN1P49257 510 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 CDC37Q16543 378 aaPredicted RBP15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 SYDE2Q5VT97 1194 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 GPIHBP1Q8IV16 184 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 NFAT5O94916 1531 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 CETN2P41208 172 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 TBC1D10BQ4KMP7 808 aaPredicted RBP15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 SBK1Q52WX2 424 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 FAM212AQ96EL1 285 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 KIAA1024Q9UPX6 916 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 IVNS1ABPQ9Y6Y0 642 aa15.8■□□□□ 0.12
SHROOM1-203ENST00000378679 ASNSP08243 561 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 SMTNP53814 917 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 EZH2Q15910 746 aaKnown RBP15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 KCNB2Q92953 911 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 CENPHQ9H3R5 247 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 PYCARDQ9ULZ3 195 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 MYO3BQ8WXR4 1341 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 KIF28PB7ZC32 967 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 hCG_1984214I3L0E3 225 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 COBLO75128 1261 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 EIF3JO75822 258 aaKnown RBP15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 SLC15A2Q16348 729 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 ZNF569Q5MCW4 686 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 STRIP1Q5VSL9 837 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 SRBD1Q8N5C6 995 aaKnown RBP15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 ZNF713Q8N859 430 aaPredicted RBP15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 SMCR8Q8TEV9 937 aaPredicted RBP15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 GBP3Q9H0R5 595 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 FMN2Q9NZ56 1722 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 FLT1P17948 1338 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 MACROD2A1Z1Q3 448 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 EEF2P13639 858 aaKnown RBP15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 SPATA1Q5VX52 437 aa15.79■□□□□ 0.12
SHROOM1-203ENST00000378679 MIER3Q7Z3K6 550 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms