RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 WDR78Q5VTH9 848 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 APOA5Q6Q788 366 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.42■□□□□ 0.06
CKAP2-202ENST00000378034 ADGRF4Q8IZF3 695 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 CHST13Q8NET6 341 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 MCOLN1Q9GZU1 580 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 UBA5Q9GZZ9 404 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 GJD2Q9UKL4 321 aa15.42■□□□□ 0.06
CKAP2-202ENST00000378034 ZNF236Q9UL36 1845 aa15.41■□□□□ 0.06
CKAP2-202ENST00000378034 ECM2O94769 699 aaPredicted RBP15.41■□□□□ 0.06
CKAP2-202ENST00000378034 PRKCZQ05513 592 aa15.41■□□□□ 0.06
CKAP2-202ENST00000378034 PPP2R5BQ15173 497 aa15.41■□□□□ 0.06
CKAP2-202ENST00000378034 MORN1Q5T089 497 aa15.41■□□□□ 0.06
CKAP2-202ENST00000378034 FANCBQ8NB91 859 aa15.41■□□□□ 0.06
CKAP2-202ENST00000378034 ALDH8A1Q9H2A2 487 aaPredicted RBP15.41■□□□□ 0.06
CKAP2-202ENST00000378034 PLXNB2O15031 1838 aa15.41■□□□□ 0.06
CKAP2-202ENST00000378034 DOCK3Q8IZD9 2030 aa15.41■□□□□ 0.06
CKAP2-202ENST00000378034 ZBTB43O43298 467 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 FLT3LGP49771 235 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 EVCP57679 992 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 GRB14Q14449 540 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 CCDC174Q6PII3 467 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 RAET1EQ8TD07 263 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 USP6NLQ92738 828 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 BRF1Q92994 677 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 MYL10Q9BUA6 226 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 RIOX1Q9H6W3 641 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 JMJD4Q9H9V9 463 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 PDRG1Q9NUG6 133 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 RBM28Q9NW13 759 aaKnown RBP15.4■□□□□ 0.06
CKAP2-202ENST00000378034 BRPF3Q9ULD4 1205 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 GABRQQ9UN88 632 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 KLF18A0A0U1RQI7 1052 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 DHX16O60231 1041 aaKnown RBP15.4■□□□□ 0.06
CKAP2-202ENST00000378034 FCER1AP12319 257 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 XRCC5P13010 732 aaKnown RBP15.4■□□□□ 0.06
CKAP2-202ENST00000378034 RGS2P41220 211 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 RBM25P49756 843 aaKnown RBP15.4■□□□□ 0.06
CKAP2-202ENST00000378034 MTMR8Q96EF0 704 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 AGBL1Q96MI9 1066 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 C22orf23Q9BZE7 217 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 UPF3BQ9BZI7 483 aaKnown RBP15.4■□□□□ 0.06
CKAP2-202ENST00000378034 CCPG1Q9ULG6 757 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 RIPK3Q9Y572 518 aa15.4■□□□□ 0.06
CKAP2-202ENST00000378034 SNAP25P60880 206 aa15.39■□□□□ 0.05
CKAP2-202ENST00000378034 TRAF1Q13077 416 aa15.39■□□□□ 0.05
CKAP2-202ENST00000378034 MAP2K5Q13163 448 aa15.39■□□□□ 0.05
CKAP2-202ENST00000378034 KCTD2Q14681 263 aa15.39■□□□□ 0.05
CKAP2-202ENST00000378034 CDC37Q16543 378 aaPredicted RBP15.39■□□□□ 0.05
CKAP2-202ENST00000378034 MICU3Q86XE3 530 aa15.39■□□□□ 0.05
CKAP2-202ENST00000378034 TRMT44Q8IYL2 757 aaKnown RBP15.39■□□□□ 0.05
CKAP2-202ENST00000378034 PXYLP1Q8TE99 480 aa15.39■□□□□ 0.05
CKAP2-202ENST00000378034 SPZ1Q9BXG8 430 aa15.39■□□□□ 0.05
CKAP2-202ENST00000378034 CPVLQ9H3G5 476 aa15.39■□□□□ 0.05
CKAP2-202ENST00000378034 SLC5A4Q9NY91 659 aa15.39■□□□□ 0.05
CKAP2-202ENST00000378034 PTCH2Q9Y6C5 1203 aa15.39■□□□□ 0.05
CKAP2-202ENST00000378034 HOXC6P09630 235 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 APOBRQ0VD83 1088 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 SLAIN1Q8ND83 568 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 MMP19Q99542 508 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 MAF1Q9H063 256 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 ACAD9Q9H845 621 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 NID2Q14112 1375 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 CCDC196A0A1B0GTZ2 297 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 ALAS1P13196 640 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 SLC4A3P48751 1232 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 TOB2Q14106 344 aaPredicted RBP15.38■□□□□ 0.05
CKAP2-202ENST00000378034 ANKRD1Q15327 319 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 RTN1Q16799 776 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 TNS4Q8IZW8 715 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 IL27Q8NEV9 243 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 TRERF1Q96PN7 1200 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 APBA2Q99767 749 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 BACH2Q9BYV9 841 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 VAT1LQ9HCJ6 419 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 RNF146Q9NTX7 359 aa15.38■□□□□ 0.05
CKAP2-202ENST00000378034 MYH6P13533 1939 aa15.37■□□□□ 0.05
CKAP2-202ENST00000378034 GOLGA8AA7E2F4 631 aa15.37■□□□□ 0.05
CKAP2-202ENST00000378034 GOLGA8BA8MQT2 603 aa15.37■□□□□ 0.05
CKAP2-202ENST00000378034 ZBTB5O15062 677 aa15.37■□□□□ 0.05
CKAP2-202ENST00000378034 RXRAP19793 462 aa15.37■□□□□ 0.05
CKAP2-202ENST00000378034 ADORA2AP29274 412 aa15.37■□□□□ 0.05
CKAP2-202ENST00000378034 QRICH1Q2TAL8 776 aa15.37■□□□□ 0.05
CKAP2-202ENST00000378034 TMTC3Q6ZXV5 915 aa15.37■□□□□ 0.05
CKAP2-202ENST00000378034 NBPF11Q86T75 865 aa15.37■□□□□ 0.05
CKAP2-202ENST00000378034 FBXO11Q86XK2 927 aa15.37■□□□□ 0.05
CKAP2-202ENST00000378034 ZNF274Q96GC6 653 aaPredicted RBP15.37■□□□□ 0.05
CKAP2-202ENST00000378034 ZNFX1Q9P2E3 1918 aaKnown RBP15.37■□□□□ 0.05
CKAP2-202ENST00000378034 CYTH3O43739 400 aa15.36■□□□□ 0.05
CKAP2-202ENST00000378034 ADCY3O60266 1144 aa15.36■□□□□ 0.05
CKAP2-202ENST00000378034 GRK4P32298 578 aa15.36■□□□□ 0.05
CKAP2-202ENST00000378034 METAP2P50579 478 aaKnown RBP eCLIP15.36■□□□□ 0.05
CKAP2-202ENST00000378034 DPP9Q86TI2 863 aa15.36■□□□□ 0.05
CKAP2-202ENST00000378034 CCDC144CPQ8IYA2 1237 aa15.36■□□□□ 0.05
CKAP2-202ENST00000378034 AMNQ9BXJ7 453 aa15.36■□□□□ 0.05
CKAP2-202ENST00000378034 NAP1L2Q9ULW6 460 aaPredicted RBP15.36■□□□□ 0.05
CKAP2-202ENST00000378034 HPS5Q9UPZ3 1129 aa15.36■□□□□ 0.05
CKAP2-202ENST00000378034 DIS3Q9Y2L1 958 aaKnown RBP15.36■□□□□ 0.05
CKAP2-202ENST00000378034 ABCB11O95342 1321 aa15.36■□□□□ 0.05
CKAP2-202ENST00000378034 PNMA6FA0A0J9YX94 578 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms