RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 TNKSO95271 1327 aa13.58□□□□□ -0.23
SMARCE1-203ENST00000377808 SGSM2O43147 1006 aa13.58□□□□□ -0.24
SMARCE1-203ENST00000377808 EVI5O60447 810 aa13.58□□□□□ -0.24
SMARCE1-203ENST00000377808 MSCO60682 206 aa13.58□□□□□ -0.24
SMARCE1-203ENST00000377808 PLA2G6O60733 806 aa13.58□□□□□ -0.24
SMARCE1-203ENST00000377808 PDHBP11177 359 aa13.58□□□□□ -0.24
SMARCE1-203ENST00000377808 TAL1P17542 331 aaPredicted RBP13.58□□□□□ -0.24
SMARCE1-203ENST00000377808 NT5C2P49902 561 aa13.58□□□□□ -0.24
SMARCE1-203ENST00000377808 ZNF792Q3KQV3 632 aa13.58□□□□□ -0.24
SMARCE1-203ENST00000377808 LHX8Q68G74 356 aa13.58□□□□□ -0.24
SMARCE1-203ENST00000377808 KIAA1211Q6ZU35 1233 aa13.58□□□□□ -0.24
SMARCE1-203ENST00000377808 DGKHQ86XP1 1220 aa13.58□□□□□ -0.24
SMARCE1-203ENST00000377808 PNMA1Q8ND90 353 aa13.58□□□□□ -0.24
SMARCE1-203ENST00000377808 TRERF1Q96PN7 1200 aa13.58□□□□□ -0.24
SMARCE1-203ENST00000377808 TINF2Q9BSI4 451 aa13.58□□□□□ -0.24
SMARCE1-203ENST00000377808 ZSWIM5Q9P217 1185 aa13.58□□□□□ -0.24
SMARCE1-203ENST00000377808 CNPY2Q9Y2B0 182 aa13.58□□□□□ -0.24
SMARCE1-203ENST00000377808 H0YGN5 161 aa13.57□□□□□ -0.24
SMARCE1-203ENST00000377808 GOLGA8HP0CJ92 632 aa13.57□□□□□ -0.24
SMARCE1-203ENST00000377808 ZNF543Q08ER8 600 aa13.57□□□□□ -0.24
SMARCE1-203ENST00000377808 IFIT1BQ5T764 474 aaKnown RBP13.57□□□□□ -0.24
SMARCE1-203ENST00000377808 RALYLQ86SE5 291 aaKnown RBP13.57□□□□□ -0.24
SMARCE1-203ENST00000377808 ZHX1Q9UKY1 873 aaPredicted RBP13.57□□□□□ -0.24
SMARCE1-203ENST00000377808 DIS3Q9Y2L1 958 aaKnown RBP13.57□□□□□ -0.24
SMARCE1-203ENST00000377808 ZNF536O15090 1300 aa13.57□□□□□ -0.24
SMARCE1-203ENST00000377808 ZNFX1Q9P2E3 1918 aaKnown RBP13.56□□□□□ -0.24
SMARCE1-203ENST00000377808 SEPT4O43236 478 aa13.56□□□□□ -0.24
SMARCE1-203ENST00000377808 DHX16O60231 1041 aaKnown RBP13.56□□□□□ -0.24
SMARCE1-203ENST00000377808 CYP21A2P08686 494 aa13.56□□□□□ -0.24
SMARCE1-203ENST00000377808 TKFCQ3LXA3 575 aa13.56□□□□□ -0.24
SMARCE1-203ENST00000377808 NSMFQ6X4W1 530 aa13.56□□□□□ -0.24
SMARCE1-203ENST00000377808 C7orf61Q8IZ16 206 aa13.56□□□□□ -0.24
SMARCE1-203ENST00000377808 ENAHQ8N8S7 591 aaPredicted RBP13.56□□□□□ -0.24
SMARCE1-203ENST00000377808 RANBP17Q9H2T7 1088 aaKnown RBP13.56□□□□□ -0.24
SMARCE1-203ENST00000377808 NR2E3Q9Y5X4 410 aa13.56□□□□□ -0.24
SMARCE1-203ENST00000377808 PLXNA1Q9UIW2 1896 aa13.56□□□□□ -0.24
SMARCE1-203ENST00000377808 ERICH2A1L162 156 aa13.55□□□□□ -0.24
SMARCE1-203ENST00000377808 POTEB2H3BUK9 544 aa13.55□□□□□ -0.24
SMARCE1-203ENST00000377808 ICAM1P05362 532 aa13.55□□□□□ -0.24
SMARCE1-203ENST00000377808 MUM1L1Q5H9M0 696 aa13.55□□□□□ -0.24
SMARCE1-203ENST00000377808 GPATCH4Q5T3I0 446 aaKnown RBP13.55□□□□□ -0.24
SMARCE1-203ENST00000377808 GJC2Q5T442 439 aaPredicted RBP13.55□□□□□ -0.24
SMARCE1-203ENST00000377808 CYB5R4Q7L1T6 521 aa13.55□□□□□ -0.24
SMARCE1-203ENST00000377808 UBA5Q9GZZ9 404 aa13.55□□□□□ -0.24
SMARCE1-203ENST00000377808 ANO2Q9NQ90 1003 aa13.55□□□□□ -0.24
SMARCE1-203ENST00000377808 A1CFQ9NQ94 594 aaKnown RBP13.55□□□□□ -0.24
SMARCE1-203ENST00000377808 RBM8AQ9Y5S9 174 aaKnown RBP13.55□□□□□ -0.24
SMARCE1-203ENST00000377808 FRMPD3Q5JV73 1810 aa13.54□□□□□ -0.24
SMARCE1-203ENST00000377808 KBTBD13C9JR72 458 aa13.54□□□□□ -0.24
SMARCE1-203ENST00000377808 E7EWF7 191 aa13.54□□□□□ -0.24
SMARCE1-203ENST00000377808 IGHA2P01877 340 aa13.54□□□□□ -0.24
SMARCE1-203ENST00000377808 PARP1P09874 1014 aaKnown RBP13.54□□□□□ -0.24
SMARCE1-203ENST00000377808 RARBP10826 455 aa13.54□□□□□ -0.24
SMARCE1-203ENST00000377808 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
SMARCE1-203ENST00000377808 CNTN2Q02246 1040 aa13.54□□□□□ -0.24
SMARCE1-203ENST00000377808 BMP2KLQ5H9B9 411 aa13.54□□□□□ -0.24
SMARCE1-203ENST00000377808 CASC1Q6TDU7 716 aa13.54□□□□□ -0.24
SMARCE1-203ENST00000377808 BTNL9Q6UXG8 535 aa13.54□□□□□ -0.24
SMARCE1-203ENST00000377808 CHST3Q7LGC8 479 aa13.54□□□□□ -0.24
SMARCE1-203ENST00000377808 NCOA7Q8NI08 942 aa13.54□□□□□ -0.24
SMARCE1-203ENST00000377808 ESYT1Q9BSJ8 1104 aa13.54□□□□□ -0.24
SMARCE1-203ENST00000377808 SENP6Q9GZR1 1112 aaPredicted RBP13.54□□□□□ -0.24
SMARCE1-203ENST00000377808 CPVLQ9H3G5 476 aa13.54□□□□□ -0.24
SMARCE1-203ENST00000377808 PFASO15067 1338 aa13.54□□□□□ -0.24
SMARCE1-203ENST00000377808 DNAJC25-GNG10A0A024R161 153 aa13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 PTPDC1A2A3K4 754 aa13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 IFIT3O14879 490 aaKnown RBP13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 SNHG28P0DPA3 235 aa13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 AKR1A1P14550 325 aa13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 ATN1P54259 1190 aaPredicted RBP13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 SART3Q15020 963 aaKnown RBP13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 USH1GQ495M9 461 aa13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 ASPRV1Q53RT3 343 aa13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 MSL3Q8N5Y2 521 aaKnown RBP13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 ARRDC4Q8NCT1 418 aa13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 MAP4K1Q92918 833 aa13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 LENG1Q96BZ8 264 aaPredicted RBP13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 VAT1LQ9HCJ6 419 aa13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 XPNPEP3Q9NQH7 507 aa13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 NRBP1Q9UHY1 535 aa13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 TAF6LQ9Y6J9 622 aa13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 SYNGAP1Q96PV0 1343 aa13.53□□□□□ -0.24
SMARCE1-203ENST00000377808 DNM1LO00429 736 aa13.52□□□□□ -0.25
SMARCE1-203ENST00000377808 SNAI1O95863 264 aaPredicted RBP13.52□□□□□ -0.25
SMARCE1-203ENST00000377808 ZNF865P0CJ78 1059 aaPredicted RBP13.52□□□□□ -0.25
SMARCE1-203ENST00000377808 WTAPQ15007 396 aa13.52□□□□□ -0.25
SMARCE1-203ENST00000377808 CDC37Q16543 378 aaPredicted RBP13.52□□□□□ -0.25
SMARCE1-203ENST00000377808 CHRDL2Q6WN34 429 aa13.52□□□□□ -0.25
SMARCE1-203ENST00000377808 STOX1Q6ZVD7 989 aa13.52□□□□□ -0.25
SMARCE1-203ENST00000377808 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.52□□□□□ -0.25
SMARCE1-203ENST00000377808 ARMCX2Q7L311 632 aa13.52□□□□□ -0.25
SMARCE1-203ENST00000377808 ZNF467Q7Z7K2 595 aaPredicted RBP13.52□□□□□ -0.25
SMARCE1-203ENST00000377808 CCDC144CPQ8IYA2 1237 aa13.52□□□□□ -0.25
SMARCE1-203ENST00000377808 ANKS1AQ92625 1134 aa13.52□□□□□ -0.25
SMARCE1-203ENST00000377808 CYP39A1Q9NYL5 469 aa13.52□□□□□ -0.25
SMARCE1-203ENST00000377808 ZMYND8Q9ULU4 1186 aaPredicted RBP13.52□□□□□ -0.25
SMARCE1-203ENST00000377808 NFIBO00712 420 aa13.51□□□□□ -0.25
SMARCE1-203ENST00000377808 PGK1P00558 417 aa13.51□□□□□ -0.25
SMARCE1-203ENST00000377808 CALML3P27482 149 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms