RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 E2F5Q15329 346 aa17.32■□□□□ 0.36
FXN-201ENST00000377270 ADGRA1Q86SQ6 560 aa17.32■□□□□ 0.36
FXN-201ENST00000377270 SLC26A6Q9BXS9 759 aa17.32■□□□□ 0.36
FXN-201ENST00000377270 MMADHCQ9H3L0 296 aaPredicted RBP17.32■□□□□ 0.36
FXN-201ENST00000377270 RABEP2Q9H5N1 569 aa17.32■□□□□ 0.36
FXN-201ENST00000377270 L1RE1Q9UN81 338 aa17.32■□□□□ 0.36
FXN-201ENST00000377270 COL4A1P02462 1669 aa17.31■□□□□ 0.36
FXN-201ENST00000377270 UBE2Q2LH0YL09 131 aa17.31■□□□□ 0.36
FXN-201ENST00000377270 POTEB2H3BUK9 544 aa17.31■□□□□ 0.36
FXN-201ENST00000377270 ERLIN1O75477 346 aa17.31■□□□□ 0.36
FXN-201ENST00000377270 LMOD1P29536 600 aaPredicted RBP17.31■□□□□ 0.36
FXN-201ENST00000377270 MARCKSP29966 332 aaPredicted RBP17.31■□□□□ 0.36
FXN-201ENST00000377270 SF3B3Q15393 1217 aaKnown RBP17.31■□□□□ 0.36
FXN-201ENST00000377270 RBM17Q96I25 401 aaKnown RBP17.31■□□□□ 0.36
FXN-201ENST00000377270 YIPF3Q9GZM5 350 aa17.31■□□□□ 0.36
FXN-201ENST00000377270 SLC39A2Q9NP94 309 aa17.31■□□□□ 0.36
FXN-201ENST00000377270 CBFA2T2O43439 604 aa17.31■□□□□ 0.36
FXN-201ENST00000377270 NLRP12P59046 1061 aa17.31■□□□□ 0.36
FXN-201ENST00000377270 CHMP4BP1P59074 171 aa17.31■□□□□ 0.36
FXN-201ENST00000377270 SSRP1Q08945 709 aaKnown RBP17.31■□□□□ 0.36
FXN-201ENST00000377270 CWF19L1Q69YN2 538 aaKnown RBP17.31■□□□□ 0.36
FXN-201ENST00000377270 SLC30A9Q6PML9 568 aa17.31■□□□□ 0.36
FXN-201ENST00000377270 ARPC5LQ9BPX5 153 aa17.31■□□□□ 0.36
FXN-201ENST00000377270 BATF3Q9NR55 127 aa17.31■□□□□ 0.36
FXN-201ENST00000377270 RAB21Q9UL25 225 aa17.31■□□□□ 0.36
FXN-201ENST00000377270 IKBKBO14920 756 aa17.3■□□□□ 0.36
FXN-201ENST00000377270 UBASH3AP57075 661 aa17.3■□□□□ 0.36
FXN-201ENST00000377270 WTAPQ15007 396 aa17.3■□□□□ 0.36
FXN-201ENST00000377270 SLC39A14Q15043 492 aa17.3■□□□□ 0.36
FXN-201ENST00000377270 TMEM139Q8IV31 216 aa17.3■□□□□ 0.36
FXN-201ENST00000377270 SDR42E1Q8WUS8 393 aa17.3■□□□□ 0.36
FXN-201ENST00000377270 RSRC1Q96IZ7 334 aaKnown RBP17.3■□□□□ 0.36
FXN-201ENST00000377270 ANKZF1Q9H8Y5 726 aa17.3■□□□□ 0.36
FXN-201ENST00000377270 ZNF804BA4D1E1 1349 aa17.3■□□□□ 0.36
FXN-201ENST00000377270 MINDY4BA8MYZ0 360 aa17.3■□□□□ 0.36
FXN-201ENST00000377270 AHCYL1O43865 530 aa17.3■□□□□ 0.36
FXN-201ENST00000377270 KIAA0754O94854 1291 aa17.3■□□□□ 0.36
FXN-201ENST00000377270 FESP07332 822 aa17.3■□□□□ 0.36
FXN-201ENST00000377270 SCNN1BP51168 640 aa17.3■□□□□ 0.36
FXN-201ENST00000377270 UBE4AQ14139 1066 aa17.3■□□□□ 0.36
FXN-201ENST00000377270 CAVIN4Q5BKX8 364 aa17.3■□□□□ 0.36
FXN-201ENST00000377270 MINPP1Q9UNW1 487 aa17.3■□□□□ 0.36
FXN-201ENST00000377270 MAGEB6P1A0A0J9YX57 407 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 ERICH2A1L162 156 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 WDHD1O75717 1129 aaPredicted RBP17.29■□□□□ 0.36
FXN-201ENST00000377270 ATP1A3P13637 1013 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 PPARAQ07869 468 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 CASP8Q14790 479 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 SNCBQ16143 134 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 TBC1D9BQ66K14 1250 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 ARHGAP22Q7Z5H3 698 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 SRGAP1Q7Z6B7 1085 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 MFN1Q8IWA4 741 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 CCDC114Q96M63 670 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 ABCB6Q9NP58 842 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 SAMM50Q9Y512 469 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 PCDHGC5Q9Y5F6 944 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 BCL9LQ86UU0 1499 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 BIN1O00499 593 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 RASSF9O75901 435 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 ZNF202O95125 648 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 CMA1P23946 247 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 SMTNP53814 917 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 PTF1AQ7RTS3 328 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 VSTM4Q8IW00 320 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 BCAS4Q8TDM0 211 aa17.29■□□□□ 0.36
FXN-201ENST00000377270 CELF1Q92879 486 aaKnown RBP17.29■□□□□ 0.36
FXN-201ENST00000377270 RNF41Q9H4P4 317 aaPredicted RBP17.29■□□□□ 0.36
FXN-201ENST00000377270 LTBP4Q8N2S1 1624 aa17.28■□□□□ 0.36
FXN-201ENST00000377270 SHTN1A0MZ66 631 aa17.28■□□□□ 0.36
FXN-201ENST00000377270 SHOX2O60902 331 aaPredicted RBP17.28■□□□□ 0.36
FXN-201ENST00000377270 TOP1P11387 765 aaKnown RBP17.28■□□□□ 0.36
FXN-201ENST00000377270 GOLGA8FQ08AF8 430 aa17.28■□□□□ 0.36
FXN-201ENST00000377270 GOLGA8DPQ0D2H9 430 aa17.28■□□□□ 0.36
FXN-201ENST00000377270 CCDC82Q8N4S0 544 aa17.28■□□□□ 0.36
FXN-201ENST00000377270 ZSWIM4Q9H7M6 989 aa17.28■□□□□ 0.36
FXN-201ENST00000377270 NUB1Q9Y5A7 615 aa17.28■□□□□ 0.36
FXN-201ENST00000377270 LAMB2P55268 1798 aa17.28■□□□□ 0.36
FXN-201ENST00000377270 SERPINC1P01008 464 aa17.28■□□□□ 0.36
FXN-201ENST00000377270 PFKFB1P16118 471 aa17.28■□□□□ 0.36
FXN-201ENST00000377270 IFNAR1P17181 557 aa17.28■□□□□ 0.36
FXN-201ENST00000377270 CCDC40Q4G0X9 1142 aa17.28■□□□□ 0.36
FXN-201ENST00000377270 MIS18BP1Q6P0N0 1132 aa17.28■□□□□ 0.36
FXN-201ENST00000377270 MSANTD4Q8NCY6 345 aa17.28■□□□□ 0.36
FXN-201ENST00000377270 DPF2Q92785 391 aa17.28■□□□□ 0.36
FXN-201ENST00000377270 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.28■□□□□ 0.36
FXN-201ENST00000377270 HSD3B7Q9H2F3 369 aa17.28■□□□□ 0.36
FXN-201ENST00000377270 CICQ96RK0 1608 aaPredicted RBP17.28■□□□□ 0.36
FXN-201ENST00000377270 CUTAO60888 179 aa17.27■□□□□ 0.36
FXN-201ENST00000377270 SLC3A2P08195 630 aaKnown RBP17.27■□□□□ 0.36
FXN-201ENST00000377270 RTN1Q16799 776 aa17.27■□□□□ 0.36
FXN-201ENST00000377270 CFAP100Q494V2 611 aa17.27■□□□□ 0.36
FXN-201ENST00000377270 FAM228AQ86W67 206 aa17.27■□□□□ 0.36
FXN-201ENST00000377270 SDR16C5Q8N3Y7 309 aa17.27■□□□□ 0.36
FXN-201ENST00000377270 CCDC12Q8WUD4 166 aaPredicted RBP17.27■□□□□ 0.36
FXN-201ENST00000377270 NGLY1Q96IV0 654 aa17.27■□□□□ 0.36
FXN-201ENST00000377270 FAM84BQ96KN1 310 aaPredicted RBP17.27■□□□□ 0.36
FXN-201ENST00000377270 PHACTR1Q9C0D0 580 aa17.27■□□□□ 0.36
FXN-201ENST00000377270 KAT14Q9H8E8 782 aa17.27■□□□□ 0.36
FXN-201ENST00000377270 CHD4Q14839 1912 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms