RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 USP17L19D6RCP7 530 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 USP17L20D6RJB6 530 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 CCNYL3P0C7X3 344 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 MAPK4P31152 587 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 ADD2P35612 726 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 USP17L24Q0WX57 530 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 NECAB2Q7Z6G3 386 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 PLEKHH3Q7Z736 793 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 CERS3Q8IU89 383 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 RPAP2Q8IXW5 612 aaPredicted RBP11.55□□□□□ -0.56
C9orf85-202ENST00000377027 NPLOC4Q8TAT6 608 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 APBA2Q99767 749 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 RPAP3Q9H6T3 665 aaPredicted RBP11.55□□□□□ -0.56
C9orf85-202ENST00000377027 STAP2Q9UGK3 403 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 RABGAP1Q9Y3P9 1069 aa11.55□□□□□ -0.56
C9orf85-202ENST00000377027 AKR1B1P15121 316 aa11.54□□□□□ -0.56
C9orf85-202ENST00000377027 ZKSCAN1P17029 563 aaPredicted RBP11.54□□□□□ -0.56
C9orf85-202ENST00000377027 RFC5P40937 340 aa11.54□□□□□ -0.56
C9orf85-202ENST00000377027 GRB14Q14449 540 aa11.54□□□□□ -0.56
C9orf85-202ENST00000377027 TMED8Q6PL24 325 aaPredicted RBP11.54□□□□□ -0.56
C9orf85-202ENST00000377027 TTC6Q86TZ1 520 aa11.54□□□□□ -0.56
C9orf85-202ENST00000377027 C7orf61Q8IZ16 206 aa11.54□□□□□ -0.56
C9orf85-202ENST00000377027 CLASRPQ8N2M8 674 aaKnown RBP11.54□□□□□ -0.56
C9orf85-202ENST00000377027 TRPV1Q8NER1 839 aa11.54□□□□□ -0.56
C9orf85-202ENST00000377027 FEZ1Q99689 392 aa11.54□□□□□ -0.56
C9orf85-202ENST00000377027 BOLA2Q9H3K6 86 aa11.54□□□□□ -0.56
C9orf85-202ENST00000377027 EVA1BQ9NVM1 165 aa11.54□□□□□ -0.56
C9orf85-202ENST00000377027 MCM9Q9NXL9 1143 aa11.54□□□□□ -0.56
C9orf85-202ENST00000377027 ZMYND8Q9ULU4 1186 aaPredicted RBP11.54□□□□□ -0.56
C9orf85-202ENST00000377027 DDX19BQ9UMR2 479 aa11.54□□□□□ -0.56
C9orf85-202ENST00000377027 NR2E3Q9Y5X4 410 aa11.54□□□□□ -0.56
C9orf85-202ENST00000377027 PRUNE2Q8WUY3 3088 aa11.53□□□□□ -0.56
C9orf85-202ENST00000377027 SMARCA5O60264 1052 aaPredicted RBP11.53□□□□□ -0.56
C9orf85-202ENST00000377027 MBD4O95243 580 aa11.53□□□□□ -0.56
C9orf85-202ENST00000377027 SYN1P17600 705 aa11.53□□□□□ -0.56
C9orf85-202ENST00000377027 CAPN2P17655 700 aa11.53□□□□□ -0.56
C9orf85-202ENST00000377027 ATP5JP18859 108 aa11.53□□□□□ -0.56
C9orf85-202ENST00000377027 RGS2P41220 211 aa11.53□□□□□ -0.56
C9orf85-202ENST00000377027 RPIAP49247 311 aa11.53□□□□□ -0.56
C9orf85-202ENST00000377027 CTDSPL2Q05D32 466 aa11.53□□□□□ -0.56
C9orf85-202ENST00000377027 TTF1Q15361 905 aaPredicted RBP11.53□□□□□ -0.56
C9orf85-202ENST00000377027 HSP90AB4PQ58FF6 505 aa11.53□□□□□ -0.56
C9orf85-202ENST00000377027 GTF3C2Q8WUA4 911 aaPredicted RBP11.53□□□□□ -0.56
C9orf85-202ENST00000377027 CRNKL1Q9BZJ0 848 aaKnown RBP11.53□□□□□ -0.56
C9orf85-202ENST00000377027 C11orf49Q9H6J7 331 aa11.53□□□□□ -0.56
C9orf85-202ENST00000377027 PAG1Q9NWQ8 432 aa11.53□□□□□ -0.56
C9orf85-202ENST00000377027 MYH4Q9Y623 1939 aa11.52□□□□□ -0.56
C9orf85-202ENST00000377027 SMCHD1A6NHR9 2005 aa11.52□□□□□ -0.56
C9orf85-202ENST00000377027 VCANP13611 3396 aa11.52□□□□□ -0.56
C9orf85-202ENST00000377027 POLR3DP05423 398 aaPredicted RBP11.52□□□□□ -0.57
C9orf85-202ENST00000377027 HOXC6P09630 235 aa11.52□□□□□ -0.57
C9orf85-202ENST00000377027 IFIT2P09913 472 aaKnown RBP11.52□□□□□ -0.57
C9orf85-202ENST00000377027 USP14P54578 494 aa11.52□□□□□ -0.57
C9orf85-202ENST00000377027 PDE3AQ14432 1141 aa11.52□□□□□ -0.57
C9orf85-202ENST00000377027 LRRC26Q2I0M4 334 aa11.52□□□□□ -0.57
C9orf85-202ENST00000377027 PTCRAQ6ISU1 281 aaPredicted RBP11.52□□□□□ -0.57
C9orf85-202ENST00000377027 HAUS7Q99871 368 aa11.52□□□□□ -0.57
C9orf85-202ENST00000377027 MOV10L1Q9BXT6 1211 aaKnown RBP11.52□□□□□ -0.57
C9orf85-202ENST00000377027 BCL11AQ9H165 835 aa11.52□□□□□ -0.57
C9orf85-202ENST00000377027 A0A1W2PPC1 479 aa11.51□□□□□ -0.57
C9orf85-202ENST00000377027 SLC15A5A6NIM6 579 aa11.51□□□□□ -0.57
C9orf85-202ENST00000377027 ZBTB24O43167 697 aaPredicted RBP11.51□□□□□ -0.57
C9orf85-202ENST00000377027 RAB11FIP3O75154 756 aa11.51□□□□□ -0.57
C9orf85-202ENST00000377027 CYP2C19P33261 490 aa11.51□□□□□ -0.57
C9orf85-202ENST00000377027 MAGEA10P43363 369 aaPredicted RBP11.51□□□□□ -0.57
C9orf85-202ENST00000377027 C12orf60Q5U649 245 aa11.51□□□□□ -0.57
C9orf85-202ENST00000377027 PUS7LQ9H0K6 701 aaKnown RBP11.51□□□□□ -0.57
C9orf85-202ENST00000377027 CABP5Q9NP86 173 aa11.51□□□□□ -0.57
C9orf85-202ENST00000377027 SPTBN5Q9NRC6 3674 aaKnown RBP11.5□□□□□ -0.57
C9orf85-202ENST00000377027 MPHOSPH10O00566 681 aaKnown RBP11.5□□□□□ -0.57
C9orf85-202ENST00000377027 COBLO75128 1261 aa11.5□□□□□ -0.57
C9orf85-202ENST00000377027 CYBAP13498 195 aa11.5□□□□□ -0.57
C9orf85-202ENST00000377027 BMP8BP34820 402 aa11.5□□□□□ -0.57
C9orf85-202ENST00000377027 CDK8P49336 464 aa11.5□□□□□ -0.57
C9orf85-202ENST00000377027 KCNH2Q12809 1159 aa11.5□□□□□ -0.57
C9orf85-202ENST00000377027 TSHZ3Q63HK5 1081 aa11.5□□□□□ -0.57
C9orf85-202ENST00000377027 TMEM179Q6ZVK1 233 aa11.5□□□□□ -0.57
C9orf85-202ENST00000377027 C16orf86Q6ZW13 317 aa11.5□□□□□ -0.57
C9orf85-202ENST00000377027 TRMT44Q8IYL2 757 aaKnown RBP11.5□□□□□ -0.57
C9orf85-202ENST00000377027 SPICE1Q8N0Z3 855 aa11.5□□□□□ -0.57
C9orf85-202ENST00000377027 ATG4CQ96DT6 458 aa11.5□□□□□ -0.57
C9orf85-202ENST00000377027 RCAN3Q9UKA8 241 aa11.5□□□□□ -0.57
C9orf85-202ENST00000377027 TMX2Q9Y320 296 aa11.5□□□□□ -0.57
C9orf85-202ENST00000377027 USP17L12C9JPN9 530 aa11.49□□□□□ -0.57
C9orf85-202ENST00000377027 USP17L21D6R901 530 aa11.49□□□□□ -0.57
C9orf85-202ENST00000377027 HMMRO75330 724 aa11.49□□□□□ -0.57
C9orf85-202ENST00000377027 AP1G2O75843 785 aa11.49□□□□□ -0.57
C9orf85-202ENST00000377027 CD2BP2O95400 341 aaKnown RBP11.49□□□□□ -0.57
C9orf85-202ENST00000377027 F12P00748 615 aaPredicted RBP11.49□□□□□ -0.57
C9orf85-202ENST00000377027 ADORA2AP29274 412 aa11.49□□□□□ -0.57
C9orf85-202ENST00000377027 UBE3CQ15386 1083 aa11.49□□□□□ -0.57
C9orf85-202ENST00000377027 WDR78Q5VTH9 848 aa11.49□□□□□ -0.57
C9orf85-202ENST00000377027 CTR9Q6PD62 1173 aa11.49□□□□□ -0.57
C9orf85-202ENST00000377027 SPATC1LQ9H0A9 340 aa11.49□□□□□ -0.57
C9orf85-202ENST00000377027 VCPKMTQ9H867 229 aa11.49□□□□□ -0.57
C9orf85-202ENST00000377027 ATP8A2Q9NTI2 1148 aa11.49□□□□□ -0.57
C9orf85-202ENST00000377027 FBXO28Q9NVF7 368 aa11.49□□□□□ -0.57
C9orf85-202ENST00000377027 ERCC3P19447 782 aa11.48□□□□□ -0.57
C9orf85-202ENST00000377027 CCNA1P78396 465 aa11.48□□□□□ -0.57
C9orf85-202ENST00000377027 ICA1Q05084 483 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms