RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 DTHD1Q6ZMT9 781 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 USP49Q70CQ1 688 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 DHX36Q9H2U1 1008 aaKnown RBP9.28□□□□□ -0.92
UBR4-202ENST00000375224 RIOX1Q9H6W3 641 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 VEGFAP15692 232 aaPredicted RBP9.28□□□□□ -0.92
UBR4-202ENST00000375224 SEMA3FQ13275 785 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 CDC42EP5Q6NZY7 148 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 TMC6Q7Z403 805 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 SUPT20HQ8NEM7 779 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 ZDHHC15Q96MV8 337 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 IGKV6D-41A0A0C4DH26 115 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 SMCO2A6NFE2 343 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 NPM3O75607 178 aaKnown RBP9.28□□□□□ -0.92
UBR4-202ENST00000375224 SKILP12757 684 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 CRKP46108 304 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 NONOQ15233 471 aaKnown RBP eCLIP9.28□□□□□ -0.92
UBR4-202ENST00000375224 NOM1Q5C9Z4 860 aaKnown RBP9.28□□□□□ -0.92
UBR4-202ENST00000375224 ICE2Q659A1 982 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 USP17L2Q6R6M4 530 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 C4orf32Q8N8J7 132 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 RMND1Q9NWS8 449 aa9.28□□□□□ -0.92
UBR4-202ENST00000375224 GTPBP6O43824 516 aaPredicted RBP9.27□□□□□ -0.93
UBR4-202ENST00000375224 GOLGA8HP0CJ92 632 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 PDHBP11177 359 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 SFPQP23246 707 aaKnown RBP eCLIP9.27□□□□□ -0.93
UBR4-202ENST00000375224 DPYDQ12882 1025 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 CFAP100Q494V2 611 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 C17orf53Q8N3J3 647 aaPredicted RBP9.27□□□□□ -0.93
UBR4-202ENST00000375224 AK8Q96MA6 479 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 WNT7AO00755 349 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 MYL1P05976 194 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 SNHG28P0DPA3 235 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 BMP6P22004 513 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 AFMP43652 599 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 KCNJ6P48051 423 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 SCNN1DP51172 638 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 MAP2K1Q02750 393 aaPredicted RBP9.27□□□□□ -0.93
UBR4-202ENST00000375224 SLC35G1Q2M3R5 365 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 GPATCH4Q5T3I0 446 aaKnown RBP9.27□□□□□ -0.93
UBR4-202ENST00000375224 APOBEC3HQ6NTF7 200 aaKnown RBP9.27□□□□□ -0.93
UBR4-202ENST00000375224 TYW1BQ6NUM6 668 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 PPP1R18Q6NYC8 613 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 CCDC112Q8NEF3 446 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 HSD3B7Q9H2F3 369 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 DEF6Q9H4E7 631 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 KCND1Q9NSA2 647 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 FANCLQ9NW38 375 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 STK32BQ9NY57 414 aa9.27□□□□□ -0.93
UBR4-202ENST00000375224 USP17L5A8MUK1 530 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 AKR1B1P15121 316 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 TERF2Q15554 542 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 E2F4Q16254 413 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 MSL1Q68DK7 614 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 DDX4Q9NQI0 724 aaKnown RBP9.26□□□□□ -0.93
UBR4-202ENST00000375224 TNS1Q9HBL0 1735 aaKnown RBP9.26□□□□□ -0.93
UBR4-202ENST00000375224 A0A087X0B3 334 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 TPD52L1Q16890 204 aaPredicted RBP9.26□□□□□ -0.93
UBR4-202ENST00000375224 INF2Q27J81 1249 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 HOMER1Q86YM7 354 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 GRAMD1CQ8IYS0 662 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 ZNF526Q8TF50 670 aaPredicted RBP9.26□□□□□ -0.93
UBR4-202ENST00000375224 CCSER1Q9C0I3 900 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 CUEDC2Q9H467 287 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 DBNDD1Q9H9R9 158 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 MAGEF1Q9HAY2 307 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 NFE2L3Q9Y4A8 694 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 KIF2AO00139 706 aaPredicted RBP9.26□□□□□ -0.93
UBR4-202ENST00000375224 CCP110O43303 1012 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 ECE2O60344 883 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 ATP1A3P13637 1013 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 GTF2F1P35269 517 aaKnown RBP eCLIP9.26□□□□□ -0.93
UBR4-202ENST00000375224 UBA7P41226 1012 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 STAT6P42226 847 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 SLC15A2Q16348 729 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 MNS1Q8NEH6 495 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 RASGRP4Q8TDF6 673 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 PIGSQ96S52 555 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 IDI2Q9BXS1 227 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 VAT1LQ9HCJ6 419 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 SERPINA10Q9UK55 444 aa9.26□□□□□ -0.93
UBR4-202ENST00000375224 SHMT1P34896 483 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 CCZ1BP86790 482 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 CCZ1P86791 482 aaPredicted RBP9.25□□□□□ -0.93
UBR4-202ENST00000375224 SPATA1Q5VX52 437 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 PDXDC2PQ6P474 469 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 NEK8Q86SG6 692 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 VSTM4Q8IW00 320 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 REXO1Q8N1G1 1221 aaKnown RBP9.25□□□□□ -0.93
UBR4-202ENST00000375224 RASSF8Q8NHQ8 419 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 CTAGE1Q96RT6 745 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 GLT8D2Q9H1C3 349 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 PI4KBQ9UBF8 816 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 ZNF18P17022 549 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 ZNF543Q08ER8 600 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 IL17AQ16552 155 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 DACT2Q5SW24 774 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 RRAGBQ5VZM2 374 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 KRT222Q8N1A0 295 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 MXD3Q9BW11 206 aa9.25□□□□□ -0.93
UBR4-202ENST00000375224 DISC1Q9NRI5 854 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms