RNA–Protein interactions for RNA: ENST00000374692.7

TMEM38B-202, Transcript of transmembrane protein 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-202ENST00000374692 HPSEQ9Y251 543 aa13.48□□□□□ -0.25
TMEM38B-202ENST00000374692 ACTN4O43707 911 aaKnown RBP13.48□□□□□ -0.25
TMEM38B-202ENST00000374692 NRDCO43847 1150 aa13.48□□□□□ -0.25
TMEM38B-202ENST00000374692 HS1BP3Q53T59 392 aa13.48□□□□□ -0.25
TMEM38B-202ENST00000374692 DLK2Q6UY11 383 aa13.48□□□□□ -0.25
TMEM38B-202ENST00000374692 CCDC148Q8NFR7 591 aa13.48□□□□□ -0.25
TMEM38B-202ENST00000374692 NEDD1Q8NHV4 660 aa13.48□□□□□ -0.25
TMEM38B-202ENST00000374692 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.48□□□□□ -0.253e-6■■■■■ 37.3
TMEM38B-202ENST00000374692 SYNRGQ9UMZ2 1314 aa13.48□□□□□ -0.25
TMEM38B-202ENST00000374692 PLCG1P19174 1290 aa13.48□□□□□ -0.25
TMEM38B-202ENST00000374692 DNA2P51530 1060 aa13.48□□□□□ -0.25
TMEM38B-202ENST00000374692 PLS1Q14651 629 aa13.48□□□□□ -0.25
TMEM38B-202ENST00000374692 NELFCDQ8IXH7 590 aa13.48□□□□□ -0.25
TMEM38B-202ENST00000374692 TANGO6Q9C0B7 1094 aa13.48□□□□□ -0.25
TMEM38B-202ENST00000374692 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
TMEM38B-202ENST00000374692 DNAI1Q9UI46 699 aa13.48□□□□□ -0.25
TMEM38B-202ENST00000374692 SLC37A4O43826 429 aa13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 ONECUT3O60422 494 aaPredicted RBP13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 TTLL1O95922 423 aa13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 FCER1AP12319 257 aa13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 GNAQP50148 359 aa13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 CABP7Q86V35 215 aa13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 ACER1Q8TDN7 264 aa13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 DDX60Q8IY21 1712 aaKnown RBP13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 ADCY7P51828 1080 aa13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 IRX2Q9BZI1 471 aaPredicted RBP13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 PDE4DQ08499 809 aa13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 MCM6Q14566 821 aa13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 DLGAP5Q15398 846 aa13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 PRR16Q569H4 304 aa13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 CEP135Q66GS9 1140 aa13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 HINFPQ9BQA5 517 aa13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 MMRN2Q9H8L6 949 aa13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 PRDM10Q9NQV6 1147 aa13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 FBXO28Q9NVF7 368 aa13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 BARHL2Q9NY43 387 aa13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 TFR2Q9UP52 801 aa13.47□□□□□ -0.25
TMEM38B-202ENST00000374692 NRAPQ86VF7 1730 aa13.46□□□□□ -0.25
TMEM38B-202ENST00000374692 PSMD14O00487 310 aa13.46□□□□□ -0.25
TMEM38B-202ENST00000374692 CLSTN1O94985 981 aa13.46□□□□□ -0.25
TMEM38B-202ENST00000374692 SHMT1P34896 483 aa13.46□□□□□ -0.25
TMEM38B-202ENST00000374692 JAG1P78504 1218 aa13.46□□□□□ -0.25
TMEM38B-202ENST00000374692 CALCRLQ16602 461 aa13.46□□□□□ -0.25
TMEM38B-202ENST00000374692 ABCB5Q2M3G0 1257 aa13.46□□□□□ -0.25
TMEM38B-202ENST00000374692 SNX29Q8TEQ0 813 aa13.46□□□□□ -0.25
TMEM38B-202ENST00000374692 NELFBQ8WX92 580 aa13.46□□□□□ -0.25
TMEM38B-202ENST00000374692 PSTPIP2Q9H939 334 aa13.46□□□□□ -0.25
TMEM38B-202ENST00000374692 LRWD1Q9UFC0 647 aa13.46□□□□□ -0.25
TMEM38B-202ENST00000374692 SLFN14P0C7P3 912 aa13.46□□□□□ -0.25
TMEM38B-202ENST00000374692 PPP4CP60510 307 aa13.46□□□□□ -0.25
TMEM38B-202ENST00000374692 CCDC112Q8NEF3 446 aa13.46□□□□□ -0.25
TMEM38B-202ENST00000374692 TBC1D5Q92609 795 aa13.46□□□□□ -0.25
TMEM38B-202ENST00000374692 NUDT12Q9BQG2 462 aa13.46□□□□□ -0.25
TMEM38B-202ENST00000374692 GLIS2Q9BZE0 524 aaPredicted RBP13.46□□□□□ -0.25
TMEM38B-202ENST00000374692 TNRC6CQ9HCJ0 1690 aaKnown RBP13.46□□□□□ -0.26
TMEM38B-202ENST00000374692 A0A0U1RQJ8 604 aa13.46□□□□□ -0.26
TMEM38B-202ENST00000374692 IGSF3O75054 1194 aa13.46□□□□□ -0.26
TMEM38B-202ENST00000374692 R3HDM1Q15032 1099 aaKnown RBP13.46□□□□□ -0.26
TMEM38B-202ENST00000374692 NBPF9Q3BBW0 867 aa13.46□□□□□ -0.26
TMEM38B-202ENST00000374692 NEK8Q86SG6 692 aa13.46□□□□□ -0.26
TMEM38B-202ENST00000374692 ATRIPQ8WXE1 791 aa13.46□□□□□ -0.26
TMEM38B-202ENST00000374692 AKT1S1Q96B36 256 aa13.46□□□□□ -0.26
TMEM38B-202ENST00000374692 DNAJC18Q9H819 358 aa13.46□□□□□ -0.26
TMEM38B-202ENST00000374692 MYH7P12883 1935 aa13.45□□□□□ -0.26
TMEM38B-202ENST00000374692 ANKRD36CQ5JPF3 1778 aa13.45□□□□□ -0.26
TMEM38B-202ENST00000374692 NPHP3-ACAD11A0A0J9YXS1 232 aa13.45□□□□□ -0.26
TMEM38B-202ENST00000374692 URI1O94763 535 aaPredicted RBP13.45□□□□□ -0.26
TMEM38B-202ENST00000374692 GNA11P29992 359 aa13.45□□□□□ -0.26
TMEM38B-202ENST00000374692 HOXA10P31260 410 aaPredicted RBP13.45□□□□□ -0.26
TMEM38B-202ENST00000374692 PPFIBP1Q86W92 1011 aa13.45□□□□□ -0.26
TMEM38B-202ENST00000374692 MTRQ99707 1265 aa13.45□□□□□ -0.26
TMEM38B-202ENST00000374692 YDJCA8MPS7 323 aa13.45□□□□□ -0.26
TMEM38B-202ENST00000374692 TPM3P06753 285 aa13.45□□□□□ -0.26
TMEM38B-202ENST00000374692 QRICH1Q2TAL8 776 aa13.45□□□□□ -0.26
TMEM38B-202ENST00000374692 TICAM2Q86XR7 235 aa13.45□□□□□ -0.26
TMEM38B-202ENST00000374692 JMJD4Q9H9V9 463 aa13.45□□□□□ -0.26
TMEM38B-202ENST00000374692 PALM3A6NDB9 673 aaPredicted RBP13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 EGFRP00533 1210 aa13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 ATP2C1P98194 919 aaPredicted RBP13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 SAMD7Q7Z3H4 446 aa13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 CYP2W1Q8TAV3 490 aa13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 SRRTQ9BXP5 876 aaKnown RBP13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 FAM198AQ9UFP1 575 aa13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 F5H6K3 240 aa13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 RPN1P04843 607 aaKnown RBP13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 OR52Z1P0C646 297 aa13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 ARID5AQ03989 594 aa13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 KLRC3Q07444 240 aa13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 NCAPH2Q6IBW4 605 aa13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 SH3BP5LQ7L8J4 393 aa13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 TTLL6Q8N841 843 aa13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 IGSF22Q8N9C0 903 aa13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 GLIS3Q8NEA6 775 aa13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 MED15Q96RN5 788 aa13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 EPC1Q9H2F5 836 aa13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 ASTN2O75129 1339 aaPredicted RBP13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 SFI1A8K8P3 1242 aa13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 PRCPP42785 496 aa13.44□□□□□ -0.26
TMEM38B-202ENST00000374692 UBXN1Q04323 297 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms