RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 ZEB2O60315 1214 aa17.79■□□□□ 0.44
CDKN1A-202ENST00000373711 IFIT2P09913 472 aaKnown RBP17.79■□□□□ 0.44
CDKN1A-202ENST00000373711 CEP85Q6P2H3 762 aa17.79■□□□□ 0.44
CDKN1A-202ENST00000373711 USP17L12C9JPN9 530 aa17.78■□□□□ 0.44
CDKN1A-202ENST00000373711 USP17L21D6R901 530 aa17.78■□□□□ 0.44
CDKN1A-202ENST00000373711 GTPBP6O43824 516 aaPredicted RBP17.78■□□□□ 0.44
CDKN1A-202ENST00000373711 CD4P01730 458 aa17.78■□□□□ 0.44
CDKN1A-202ENST00000373711 CYP2C18P33260 490 aa17.78■□□□□ 0.44
CDKN1A-202ENST00000373711 ADD2P35612 726 aa17.78■□□□□ 0.44
CDKN1A-202ENST00000373711 SLC4A3P48751 1232 aa17.78■□□□□ 0.44
CDKN1A-202ENST00000373711 ARMCX2Q7L311 632 aa17.78■□□□□ 0.44
CDKN1A-202ENST00000373711 MICALL1Q8N3F8 863 aa17.78■□□□□ 0.44
CDKN1A-202ENST00000373711 CHST13Q8NET6 341 aa17.78■□□□□ 0.44
CDKN1A-202ENST00000373711 RHPN1Q8TCX5 695 aa17.78■□□□□ 0.44
CDKN1A-202ENST00000373711 IL1RAPL2Q9NP60 686 aa17.78■□□□□ 0.44
CDKN1A-202ENST00000373711 ARPP21Q9UBL0 812 aaPredicted RBP17.78■□□□□ 0.44
CDKN1A-202ENST00000373711 SLC4A7Q9Y6M7 1214 aa17.78■□□□□ 0.44
CDKN1A-202ENST00000373711 OAZ1P54368 228 aa17.77■□□□□ 0.44
CDKN1A-202ENST00000373711 NKX3-2P78367 333 aa17.77■□□□□ 0.44
CDKN1A-202ENST00000373711 SKIV2LQ15477 1246 aaKnown RBP17.77■□□□□ 0.44
CDKN1A-202ENST00000373711 NOL8Q76FK4 1167 aaKnown RBP17.77■□□□□ 0.44
CDKN1A-202ENST00000373711 CPXCR1Q8N123 301 aa17.77■□□□□ 0.44
CDKN1A-202ENST00000373711 KIF1BPQ96EK5 621 aa17.77■□□□□ 0.44
CDKN1A-202ENST00000373711 PAG1Q9NWQ8 432 aa17.77■□□□□ 0.44
CDKN1A-202ENST00000373711 PCDHA11Q9Y5I1 949 aa17.77■□□□□ 0.44
CDKN1A-202ENST00000373711 CHD7Q9P2D1 2997 aa17.76■□□□□ 0.43
CDKN1A-202ENST00000373711 PRKAB2O43741 272 aa17.76■□□□□ 0.43
CDKN1A-202ENST00000373711 PFKMP08237 780 aa17.76■□□□□ 0.43
CDKN1A-202ENST00000373711 FDX1P10109 184 aa17.76■□□□□ 0.43
CDKN1A-202ENST00000373711 ZSCAN25Q6NSZ9 544 aa17.76■□□□□ 0.43
CDKN1A-202ENST00000373711 OTOP2Q7RTS6 562 aa17.76■□□□□ 0.43
CDKN1A-202ENST00000373711 NYAP2Q9P242 653 aa17.76■□□□□ 0.43
CDKN1A-202ENST00000373711 YBX2Q9Y2T7 364 aaKnown RBP17.76■□□□□ 0.43
CDKN1A-202ENST00000373711 RIPK3Q9Y572 518 aa17.76■□□□□ 0.43
CDKN1A-202ENST00000373711 SLC4A4Q9Y6R1 1079 aa17.76■□□□□ 0.43
CDKN1A-202ENST00000373711 CYP2D7A0A087X1C5 515 aa17.75■□□□□ 0.43
CDKN1A-202ENST00000373711 ZBBXA8MT70 800 aa17.75■□□□□ 0.43
CDKN1A-202ENST00000373711 F5H6K3 240 aa17.75■□□□□ 0.43
CDKN1A-202ENST00000373711 BMP1P13497 986 aa17.75■□□□□ 0.43
CDKN1A-202ENST00000373711 HOXD11P31277 338 aaPredicted RBP17.75■□□□□ 0.43
CDKN1A-202ENST00000373711 TNFAIP2Q03169 654 aa17.75■□□□□ 0.43
CDKN1A-202ENST00000373711 KLRC3Q07444 240 aa17.75■□□□□ 0.43
CDKN1A-202ENST00000373711 ITGA7Q13683 1181 aa17.75■□□□□ 0.43
CDKN1A-202ENST00000373711 CCDC144CPQ8IYA2 1237 aa17.75■□□□□ 0.43
CDKN1A-202ENST00000373711 SLC43A3Q8NBI5 491 aa17.75■□□□□ 0.43
CDKN1A-202ENST00000373711 AP5M1Q9H0R1 490 aa17.75■□□□□ 0.43
CDKN1A-202ENST00000373711 MKNK2Q9HBH9 465 aa17.75■□□□□ 0.43
CDKN1A-202ENST00000373711 FEM1BQ9UK73 627 aa17.75■□□□□ 0.43
CDKN1A-202ENST00000373711 LRRC37A2A6NM11 1700 aa17.75■□□□□ 0.43
CDKN1A-202ENST00000373711 ASB14A6NK59 587 aa17.74■□□□□ 0.43
CDKN1A-202ENST00000373711 ERC2O15083 957 aa17.74■□□□□ 0.43
CDKN1A-202ENST00000373711 ADCY6O43306 1168 aa17.74■□□□□ 0.43
CDKN1A-202ENST00000373711 NDUFB10O96000 172 aa17.74■□□□□ 0.43
CDKN1A-202ENST00000373711 CENPBP07199 599 aaPredicted RBP17.74■□□□□ 0.43
CDKN1A-202ENST00000373711 UBE3CQ15386 1083 aa17.74■□□□□ 0.43
CDKN1A-202ENST00000373711 TLK2Q86UE8 772 aa17.74■□□□□ 0.43
CDKN1A-202ENST00000373711 KIFC2Q96AC6 838 aa17.74■□□□□ 0.43
CDKN1A-202ENST00000373711 NUP88Q99567 741 aaPredicted RBP17.74■□□□□ 0.43
CDKN1A-202ENST00000373711 SLC38A10Q9HBR0 1119 aa17.74■□□□□ 0.43
CDKN1A-202ENST00000373711 ZNF287Q9HBT7 754 aa17.74■□□□□ 0.43
CDKN1A-202ENST00000373711 SYNPO2Q9UMS6 1093 aa17.74■□□□□ 0.43
CDKN1A-202ENST00000373711 COG5Q9UP83 839 aa17.74■□□□□ 0.43
CDKN1A-202ENST00000373711 HMMRO75330 724 aa17.73■□□□□ 0.43
CDKN1A-202ENST00000373711 ATP2A2P16615 1042 aaKnown RBP17.73■□□□□ 0.43
CDKN1A-202ENST00000373711 IRX5P78411 483 aaPredicted RBP17.73■□□□□ 0.43
CDKN1A-202ENST00000373711 BEX3Q00994 111 aa17.73■□□□□ 0.43
CDKN1A-202ENST00000373711 FSCN1Q16658 493 aaKnown RBP17.73■□□□□ 0.43
CDKN1A-202ENST00000373711 CTR9Q6PD62 1173 aa17.73■□□□□ 0.43
CDKN1A-202ENST00000373711 CXCL17Q6UXB2 119 aa17.73■□□□□ 0.43
CDKN1A-202ENST00000373711 NOC4LQ9BVI4 516 aaKnown RBP17.73■□□□□ 0.43
CDKN1A-202ENST00000373711 ACAD9Q9H845 621 aa17.73■□□□□ 0.43
CDKN1A-202ENST00000373711 RAVER2Q9HCJ3 691 aaKnown RBP17.73■□□□□ 0.43
CDKN1A-202ENST00000373711 TRANK1O15050 2925 aa17.73■□□□□ 0.43
CDKN1A-202ENST00000373711 PRRC2BQ5JSZ5 2229 aaKnown RBP17.72■□□□□ 0.43
CDKN1A-202ENST00000373711 ACTN1P12814 892 aa17.72■□□□□ 0.43
CDKN1A-202ENST00000373711 CCL23P55773 120 aa17.72■□□□□ 0.43
CDKN1A-202ENST00000373711 TMEM67Q5HYA8 995 aa17.72■□□□□ 0.43
CDKN1A-202ENST00000373711 FGD4Q96M96 766 aa17.72■□□□□ 0.43
CDKN1A-202ENST00000373711 NECAB3Q96P71 396 aaPredicted RBP17.72■□□□□ 0.43
CDKN1A-202ENST00000373711 CTAGE5O15320 804 aa17.71■□□□□ 0.43
CDKN1A-202ENST00000373711 SUPT20HL2P0C7V6 817 aa17.71■□□□□ 0.43
CDKN1A-202ENST00000373711 POU3F3P20264 500 aaPredicted RBP17.71■□□□□ 0.43
CDKN1A-202ENST00000373711 RABGGTBP53611 331 aa17.71■□□□□ 0.43
CDKN1A-202ENST00000373711 KATNBL1Q9H079 304 aa17.71■□□□□ 0.43
CDKN1A-202ENST00000373711 BOLA2Q9H3K6 86 aa17.71■□□□□ 0.43
CDKN1A-202ENST00000373711 COG6Q9Y2V7 657 aa17.71■□□□□ 0.43
CDKN1A-202ENST00000373711 Q9Y3F1 56 aa17.71■□□□□ 0.43
CDKN1A-202ENST00000373711 UMODL1Q5DID0 1318 aa17.71■□□□□ 0.42
CDKN1A-202ENST00000373711 REV3LO60673 3130 aa17.7■□□□□ 0.42
CDKN1A-202ENST00000373711 RAB11FIP3O75154 756 aa17.7■□□□□ 0.42
CDKN1A-202ENST00000373711 ATP5JP18859 108 aa17.7■□□□□ 0.42
CDKN1A-202ENST00000373711 TFF2Q03403 129 aa17.7■□□□□ 0.42
CDKN1A-202ENST00000373711 TKFCQ3LXA3 575 aa17.7■□□□□ 0.42
CDKN1A-202ENST00000373711 SBK1Q52WX2 424 aa17.7■□□□□ 0.42
CDKN1A-202ENST00000373711 TMEM31Q5JXX7 168 aa17.7■□□□□ 0.42
CDKN1A-202ENST00000373711 GIMAP6Q6P9H5 292 aa17.7■□□□□ 0.42
CDKN1A-202ENST00000373711 RPAP2Q8IXW5 612 aaPredicted RBP17.7■□□□□ 0.42
CDKN1A-202ENST00000373711 SLC9A7Q96T83 725 aa17.7■□□□□ 0.42
CDKN1A-202ENST00000373711 HAUS7Q99871 368 aa17.7■□□□□ 0.42
CDKN1A-202ENST00000373711 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms