RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 SLC16A2P36021 539 aa22.24■■□□□ 1.15
HDAC1-201ENST00000373548 DTHD1Q6ZMT9 781 aa22.24■■□□□ 1.15
HDAC1-201ENST00000373548 IQUBQ8NA54 791 aa22.24■■□□□ 1.15
HDAC1-201ENST00000373548 MLKLQ8NB16 471 aa22.24■■□□□ 1.15
HDAC1-201ENST00000373548 TMEM260Q9NX78 707 aa22.24■■□□□ 1.15
HDAC1-201ENST00000373548 LAD1O00515 517 aa22.23■■□□□ 1.15
HDAC1-201ENST00000373548 CASP1P29466 404 aa22.23■■□□□ 1.15
HDAC1-201ENST00000373548 DPYDQ12882 1025 aa22.23■■□□□ 1.15
HDAC1-201ENST00000373548 JAKMIP3Q5VZ66 844 aa22.23■■□□□ 1.15
HDAC1-201ENST00000373548 PDXDC2PQ6P474 469 aa22.23■■□□□ 1.15
HDAC1-201ENST00000373548 TMEM179Q6ZVK1 233 aa22.23■■□□□ 1.15
HDAC1-201ENST00000373548 NEK8Q86SG6 692 aa22.23■■□□□ 1.15
HDAC1-201ENST00000373548 MTMR8Q96EF0 704 aa22.23■■□□□ 1.15
HDAC1-201ENST00000373548 PYM1Q9BRP8 204 aaKnown RBP22.23■■□□□ 1.15
HDAC1-201ENST00000373548 IFNKQ9P0W0 207 aa22.23■■□□□ 1.15
HDAC1-201ENST00000373548 GDF11O95390 407 aa22.22■■□□□ 1.15
HDAC1-201ENST00000373548 CDC25AP30304 524 aa22.22■■□□□ 1.15
HDAC1-201ENST00000373548 PRPHP41219 470 aa22.22■■□□□ 1.15
HDAC1-201ENST00000373548 ADCY7P51828 1080 aa22.22■■□□□ 1.15
HDAC1-201ENST00000373548 LETM2Q2VYF4 491 aa22.22■■□□□ 1.15
HDAC1-201ENST00000373548 C17orf53Q8N3J3 647 aaPredicted RBP22.22■■□□□ 1.15
HDAC1-201ENST00000373548 KIAA1524Q8TCG1 905 aa22.22■■□□□ 1.15
HDAC1-201ENST00000373548 XPO4Q9C0E2 1151 aaKnown RBP22.22■■□□□ 1.15
HDAC1-201ENST00000373548 USP17L10C9JJH3 530 aa22.22■■□□□ 1.15
HDAC1-201ENST00000373548 ATP1A3P13637 1013 aa22.22■■□□□ 1.15
HDAC1-201ENST00000373548 ICA1Q05084 483 aa22.22■■□□□ 1.15
HDAC1-201ENST00000373548 LRMPQ12912 555 aa22.22■■□□□ 1.15
HDAC1-201ENST00000373548 ABCB5Q2M3G0 1257 aa22.22■■□□□ 1.15
HDAC1-201ENST00000373548 PPP1R18Q6NYC8 613 aa22.22■■□□□ 1.15
HDAC1-201ENST00000373548 TBCKQ8TEA7 893 aa22.22■■□□□ 1.15
HDAC1-201ENST00000373548 ZBTB12Q9Y330 459 aaPredicted RBP22.22■■□□□ 1.15
HDAC1-201ENST00000373548 DCAF4Q8WV16 495 aa22.21■■□□□ 1.15
HDAC1-201ENST00000373548 CSRNP1Q96S65 589 aa22.21■■□□□ 1.15
HDAC1-201ENST00000373548 VPS33BQ9H267 617 aa22.21■■□□□ 1.15
HDAC1-201ENST00000373548 DACH1Q9UI36 760 aa22.21■■□□□ 1.15
HDAC1-201ENST00000373548 ZBTB5O15062 677 aa22.21■■□□□ 1.15
HDAC1-201ENST00000373548 CCNT1O60563 726 aaKnown RBP22.21■■□□□ 1.15
HDAC1-201ENST00000373548 TXLNAP40222 546 aa22.21■■□□□ 1.15
HDAC1-201ENST00000373548 JAG1P78504 1218 aa22.21■■□□□ 1.15
HDAC1-201ENST00000373548 FANCCQ00597 558 aa22.21■■□□□ 1.15
HDAC1-201ENST00000373548 FMR1Q06787 632 aaKnown RBP eCLIP22.21■■□□□ 1.155e-7■□□□□ 9.2
HDAC1-201ENST00000373548 SLFN13Q68D06 897 aa22.21■■□□□ 1.15
HDAC1-201ENST00000373548 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.21■■□□□ 1.15
HDAC1-201ENST00000373548 CACTINQ8WUQ7 758 aaKnown RBP22.21■■□□□ 1.15
HDAC1-201ENST00000373548 STAMQ92783 540 aa22.21■■□□□ 1.15
HDAC1-201ENST00000373548 TMOD2Q9NZR1 351 aa22.21■■□□□ 1.15
HDAC1-201ENST00000373548 HDAC9Q9UKV0 1011 aa22.21■■□□□ 1.15
HDAC1-201ENST00000373548 CLRN2A0PK11 232 aa22.2■■□□□ 1.14
HDAC1-201ENST00000373548 TCP10L2B9ZVM9 353 aa22.2■■□□□ 1.14
HDAC1-201ENST00000373548 RRP1BQ14684 758 aaKnown RBP22.2■■□□□ 1.14
HDAC1-201ENST00000373548 NOLC1Q14978 699 aaKnown RBP eCLIP22.2■■□□□ 1.141e-6■□□□□ 8.1
HDAC1-201ENST00000373548 DLGAP5Q15398 846 aa22.2■■□□□ 1.14
HDAC1-201ENST00000373548 GSDMAQ96QA5 445 aa22.2■■□□□ 1.14
HDAC1-201ENST00000373548 MTRQ99707 1265 aa22.2■■□□□ 1.14
HDAC1-201ENST00000373548 FANCLQ9NW38 375 aa22.2■■□□□ 1.14
HDAC1-201ENST00000373548 ZNF70Q9UC06 446 aaPredicted RBP22.2■■□□□ 1.14
HDAC1-201ENST00000373548 PP2D1A8MPX8 630 aa22.19■■□□□ 1.14
HDAC1-201ENST00000373548 RAD21O60216 631 aa22.19■■□□□ 1.14
HDAC1-201ENST00000373548 ZBTB7AO95365 584 aa22.19■■□□□ 1.14
HDAC1-201ENST00000373548 OR52Z1P0C646 297 aa22.19■■□□□ 1.14
HDAC1-201ENST00000373548 SLC1A4P43007 532 aa22.19■■□□□ 1.14
HDAC1-201ENST00000373548 KARSQ15046 597 aaKnown RBP22.19■■□□□ 1.14
HDAC1-201ENST00000373548 RIC8AQ9NPQ8 531 aa22.19■■□□□ 1.14
HDAC1-201ENST00000373548 ZNRF3Q9ULT6 936 aa22.19■■□□□ 1.14
HDAC1-201ENST00000373548 NEMFO60524 1076 aa22.19■■□□□ 1.14
HDAC1-201ENST00000373548 NIM1KQ8IY84 436 aa22.19■■□□□ 1.14
HDAC1-201ENST00000373548 OGFOD1Q8N543 542 aa22.19■■□□□ 1.14
HDAC1-201ENST00000373548 SPTLC3Q9NUV7 552 aa22.19■■□□□ 1.14
HDAC1-201ENST00000373548 PIM2Q9P1W9 311 aa22.19■■□□□ 1.14
HDAC1-201ENST00000373548 GH2P01242 217 aa22.18■■□□□ 1.14
HDAC1-201ENST00000373548 ORC2Q13416 577 aaPredicted RBP22.18■■□□□ 1.14
HDAC1-201ENST00000373548 MED15Q96RN5 788 aa22.18■■□□□ 1.14
HDAC1-201ENST00000373548 CCSER1Q9C0I3 900 aa22.18■■□□□ 1.14
HDAC1-201ENST00000373548 DISC1Q9NRI5 854 aa22.18■■□□□ 1.14
HDAC1-201ENST00000373548 MYO1BO43795 1136 aa22.18■■□□□ 1.14
HDAC1-201ENST00000373548 TGFB2P61812 414 aa22.18■■□□□ 1.14
HDAC1-201ENST00000373548 ARID5BQ14865 1188 aa22.18■■□□□ 1.14
HDAC1-201ENST00000373548 RBM26Q5T8P6 1007 aaKnown RBP22.18■■□□□ 1.14
HDAC1-201ENST00000373548 FILIP1Q7Z7B0 1213 aa22.18■■□□□ 1.14
HDAC1-201ENST00000373548 ENOX1Q8TC92 643 aaKnown RBP22.18■■□□□ 1.14
HDAC1-201ENST00000373548 HERC5Q9UII4 1024 aaKnown RBP22.18■■□□□ 1.14
HDAC1-201ENST00000373548 CNTNAP1P78357 1384 aa22.17■■□□□ 1.14
HDAC1-201ENST00000373548 BRCA1P38398 1863 aaKnown RBP22.17■■□□□ 1.14
HDAC1-201ENST00000373548 F5H6K3 240 aa22.17■■□□□ 1.14
HDAC1-201ENST00000373548 GTPBP6O43824 516 aaPredicted RBP22.17■■□□□ 1.14
HDAC1-201ENST00000373548 EDIL3O43854 480 aa22.17■■□□□ 1.14
HDAC1-201ENST00000373548 STAT6P42226 847 aa22.17■■□□□ 1.14
HDAC1-201ENST00000373548 KLRC3Q07444 240 aa22.17■■□□□ 1.14
HDAC1-201ENST00000373548 SPDYE2Q495Y8 402 aa22.17■■□□□ 1.14
HDAC1-201ENST00000373548 GMCL1P1Q8NEA9 526 aa22.17■■□□□ 1.14
HDAC1-201ENST00000373548 BLZF1Q9H2G9 400 aa22.17■■□□□ 1.14
HDAC1-201ENST00000373548 ERCC5P28715 1186 aaPredicted RBP22.16■■□□□ 1.14
HDAC1-201ENST00000373548 UBA7P41226 1012 aa22.16■■□□□ 1.14
HDAC1-201ENST00000373548 CLK2P49760 499 aaKnown RBP22.16■■□□□ 1.14
HDAC1-201ENST00000373548 QRICH1Q2TAL8 776 aa22.16■■□□□ 1.14
HDAC1-201ENST00000373548 NAALADL2Q58DX5 795 aa22.16■■□□□ 1.14
HDAC1-201ENST00000373548 LRRC8AQ8IWT6 810 aa22.16■■□□□ 1.14
HDAC1-201ENST00000373548 TRMT44Q8IYL2 757 aaKnown RBP22.16■■□□□ 1.14
HDAC1-201ENST00000373548 FAM151AQ8WW52 585 aa22.16■■□□□ 1.14
HDAC1-201ENST00000373548 FER1L6Q2WGJ9 1857 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms