RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 SERPINB13Q9UIV8 391 aa11.21□□□□□ -0.62
KDM4A-201ENST00000372396 hCG_1984214I3L0E3 225 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 CHUKO15111 745 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 ZNF713Q8N859 430 aaPredicted RBP11.2□□□□□ -0.62
KDM4A-201ENST00000372396 MLKLQ8NB16 471 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 DYDC1Q8WWB3 177 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 CRACR2AQ9BSW2 395 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 DBNDD1Q9H9R9 158 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 NRBP1Q9UHY1 535 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 RGPD2P0DJD1 1756 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 USP17L3A6NCW0 530 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 USP17L4A6NCW7 530 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 HNRNPH1P31943 449 aaKnown RBP11.2□□□□□ -0.62
KDM4A-201ENST00000372396 ASIC1P78348 528 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 CERKLQ49MI3 558 aaPredicted RBP11.2□□□□□ -0.62
KDM4A-201ENST00000372396 USP17L1Q7RTZ2 530 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 SMCO2A6NFE2 343 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 H2AFXP16104 143 aaPredicted RBP11.2□□□□□ -0.62
KDM4A-201ENST00000372396 PAX7P23759 505 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 TNFAIP1Q13829 316 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 SBK1Q52WX2 424 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 GPATCH4Q5T3I0 446 aaKnown RBP11.2□□□□□ -0.62
KDM4A-201ENST00000372396 TRIM47Q96LD4 638 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 KIAA1468Q9P260 1216 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 ANAPC4Q9UJX5 808 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 ATP6V0A2Q9Y487 856 aa11.2□□□□□ -0.62
KDM4A-201ENST00000372396 ECM2O94769 699 aaPredicted RBP11.19□□□□□ -0.62
KDM4A-201ENST00000372396 NEFHP12036 1026 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 STXBP4Q6ZWJ1 553 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 GPR161Q8N6U8 529 aaKnown RBP11.19□□□□□ -0.62
KDM4A-201ENST00000372396 TBC1D16Q8TBP0 767 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 GOLGA1Q92805 767 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 CDK8P49336 464 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 CEP85LQ5SZL2 805 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 AFAP1L1Q8TED9 768 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 PDS5AQ29RF7 1337 aaKnown RBP11.19□□□□□ -0.62
KDM4A-201ENST00000372396 EFCAB8A8MWE9 144 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 CCNT1O60563 726 aaKnown RBP11.19□□□□□ -0.62
KDM4A-201ENST00000372396 TTLL1O95922 423 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 GYS1P13807 737 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 LMOD1P29536 600 aaPredicted RBP11.19□□□□□ -0.62
KDM4A-201ENST00000372396 MTIF2P46199 727 aaKnown RBP11.19□□□□□ -0.62
KDM4A-201ENST00000372396 POSTNQ15063 836 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 TTLL6Q8N841 843 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 VGLL2Q8N8G2 317 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 CACTINQ8WUQ7 758 aaKnown RBP11.19□□□□□ -0.62
KDM4A-201ENST00000372396 DYNLL2Q96FJ2 89 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 PLEKHA4Q9H4M7 779 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 STK24Q9Y6E0 443 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 DCAF8L1A6NGE4 600 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 TMTC3Q6ZXV5 915 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 TDRD7Q8NHU6 1098 aaKnown RBP11.19□□□□□ -0.62
KDM4A-201ENST00000372396 SAAL1Q96ER3 474 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 SCLT1Q96NL6 688 aa11.19□□□□□ -0.62
KDM4A-201ENST00000372396 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.19□□□□□ -0.62
KDM4A-201ENST00000372396 N4BP3O15049 544 aa11.18□□□□□ -0.62
KDM4A-201ENST00000372396 CRYMQ14894 314 aa11.18□□□□□ -0.62
KDM4A-201ENST00000372396 ENAHQ8N8S7 591 aaPredicted RBP11.18□□□□□ -0.62
KDM4A-201ENST00000372396 RUFY1Q96T51 708 aa11.18□□□□□ -0.62
KDM4A-201ENST00000372396 EPB41L4AQ9HCS5 686 aaPredicted RBP11.18□□□□□ -0.62
KDM4A-201ENST00000372396 AHDC1Q5TGY3 1603 aaPredicted RBP11.18□□□□□ -0.62
KDM4A-201ENST00000372396 KCPQ6ZWJ8 1503 aa11.18□□□□□ -0.62
KDM4A-201ENST00000372396 BICDL2A1A5D9 508 aa11.18□□□□□ -0.62
KDM4A-201ENST00000372396 DBN1Q16643 649 aa11.18□□□□□ -0.62
KDM4A-201ENST00000372396 PDE11AQ9HCR9 933 aa11.18□□□□□ -0.62
KDM4A-201ENST00000372396 MYO3BQ8WXR4 1341 aa11.18□□□□□ -0.62
KDM4A-201ENST00000372396 GOLGA6L9A6NEM1 432 aa11.18□□□□□ -0.62
KDM4A-201ENST00000372396 CYP2D6P10635 497 aa11.18□□□□□ -0.62
KDM4A-201ENST00000372396 LRRC8AQ8IWT6 810 aa11.18□□□□□ -0.62
KDM4A-201ENST00000372396 TAF6LQ9Y6J9 622 aa11.18□□□□□ -0.62
KDM4A-201ENST00000372396 CCDC189A1A4V9 331 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 TBCAO75347 108 aaKnown RBP11.17□□□□□ -0.62
KDM4A-201ENST00000372396 ICA1Q05084 483 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 ZRSR2Q15696 482 aaKnown RBP11.17□□□□□ -0.62
KDM4A-201ENST00000372396 LRRC47Q8N1G4 583 aaKnown RBP11.17□□□□□ -0.62
KDM4A-201ENST00000372396 SH3GLB2Q9NR46 395 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 PCDHA4Q9UN74 947 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 GJA3Q9Y6H8 435 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 SCN11AQ9UI33 1791 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 NDUFA8P51970 172 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 CCDC181Q5TID7 509 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 SV2BQ7L1I2 683 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 KANSL2Q9H9L4 492 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 PI4KBQ9UBF8 816 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 RIC1Q4ADV7 1423 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 ANTXR2P58335 489 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 SPECC1Q5M775 1068 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 FBXW10Q5XX13 1052 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 FOXP4Q8IVH2 680 aaPredicted RBP11.17□□□□□ -0.62
KDM4A-201ENST00000372396 TRIML1Q8N9V2 468 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 IGDCC4Q8TDY8 1250 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 NUP88Q99567 741 aaPredicted RBP11.17□□□□□ -0.62
KDM4A-201ENST00000372396 INCENPQ9NQS7 918 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 CHCHD3Q9NX63 227 aaKnown RBP11.17□□□□□ -0.62
KDM4A-201ENST00000372396 LAD1O00515 517 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 ADCY2Q08462 1091 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 TTLL12Q14166 644 aaPredicted RBP11.17□□□□□ -0.62
KDM4A-201ENST00000372396 ABCB5Q2M3G0 1257 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 C12orf60Q5U649 245 aa11.17□□□□□ -0.62
KDM4A-201ENST00000372396 CCDC50Q8IVM0 306 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms