RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 IRAK1P51617 712 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 KRT32Q14532 448 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 KCNB1Q14721 858 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 KIF6Q6ZMV9 814 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 CCDC129Q6ZRS4 1044 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 SPATA21Q7Z572 469 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 YTHDF3Q7Z739 585 aaKnown RBP9.93□□□□□ -0.82
ATG4A-203ENST00000372232 PUS3Q9BZE2 481 aaKnown RBP9.93□□□□□ -0.82
ATG4A-203ENST00000372232 PAG1Q9NWQ8 432 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 DISP2A7MBM2 1401 aa9.92□□□□□ -0.82
ATG4A-203ENST00000372232 PALLDQ8WX93 1383 aa9.92□□□□□ -0.82
ATG4A-203ENST00000372232 FMNL1O95466 1100 aaPredicted RBP9.92□□□□□ -0.82
ATG4A-203ENST00000372232 SYF2O95926 243 aaKnown RBP9.92□□□□□ -0.82
ATG4A-203ENST00000372232 PCCAP05165 728 aaPredicted RBP9.92□□□□□ -0.82
ATG4A-203ENST00000372232 PEX19P40855 299 aa9.92□□□□□ -0.82
ATG4A-203ENST00000372232 KRT85P78386 507 aa9.92□□□□□ -0.82
ATG4A-203ENST00000372232 TOB2Q14106 344 aaPredicted RBP9.92□□□□□ -0.82
ATG4A-203ENST00000372232 CCDC57Q2TAC2 916 aa9.92□□□□□ -0.82
ATG4A-203ENST00000372232 TRAF7Q6Q0C0 670 aa9.92□□□□□ -0.82
ATG4A-203ENST00000372232 C11orf57Q6ZUT1 292 aaPredicted RBP9.92□□□□□ -0.82
ATG4A-203ENST00000372232 B4GALNT4Q76KP1 1039 aa9.92□□□□□ -0.82
ATG4A-203ENST00000372232 BRAPQ7Z569 592 aa9.92□□□□□ -0.82
ATG4A-203ENST00000372232 TCEANC2Q96MN5 208 aa9.92□□□□□ -0.82
ATG4A-203ENST00000372232 PLA2G12BQ9BX93 195 aa9.92□□□□□ -0.82
ATG4A-203ENST00000372232 TUBBP07437 444 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 ACTN3Q08043 901 aaPredicted RBP9.91□□□□□ -0.82
ATG4A-203ENST00000372232 ZRSR2Q15696 482 aaKnown RBP9.91□□□□□ -0.82
ATG4A-203ENST00000372232 SNCBQ16143 134 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 STX1AQ16623 288 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 KIF4BQ2VIQ3 1234 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 EML3Q32P44 896 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 TMC7Q7Z402 723 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 MFN1Q8IWA4 741 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 DHX40Q8IX18 779 aaKnown RBP9.91□□□□□ -0.82
ATG4A-203ENST00000372232 ZBTB38Q8NAP3 1195 aaPredicted RBP9.91□□□□□ -0.82
ATG4A-203ENST00000372232 TBC1D5Q92609 795 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 FAM89AQ96GI7 184 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 ZNF396Q96N95 335 aaPredicted RBP9.91□□□□□ -0.82
ATG4A-203ENST00000372232 VCPKMTQ9H867 229 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 TMA7Q9Y2S6 64 aaKnown RBP9.91□□□□□ -0.82
ATG4A-203ENST00000372232 MAP3K15Q6ZN16 1313 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 VWA3AA6NCI4 1184 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 ENO4A6NNW6 628 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 MEFVO15553 781 aaPredicted RBP9.91□□□□□ -0.82
ATG4A-203ENST00000372232 DTNBO60941 627 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 KIAA0754O94854 1291 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 CSF1RP07333 972 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 ARSIQ5FYB1 569 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 SRGAP1Q7Z6B7 1085 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 NLGN1Q8N2Q7 840 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 KIFC2Q96AC6 838 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 HOOK2Q96ED9 719 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 FAM163AQ96GL9 167 aaPredicted RBP9.91□□□□□ -0.82
ATG4A-203ENST00000372232 NEK1Q96PY6 1258 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 PNKPQ96T60 521 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 OCSTAMPQ9BR26 566 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 PAGR1Q9BTK6 254 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 HELLSQ9NRZ9 838 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.91□□□□□ -0.82
ATG4A-203ENST00000372232 BCL9O00512 1426 aa9.91□□□□□ -0.82
ATG4A-203ENST00000372232 COL22A1Q8NFW1 1626 aaPredicted RBP9.9□□□□□ -0.82
ATG4A-203ENST00000372232 CYP21A2P08686 494 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 CHMP4BP1P59074 171 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 LAMB3Q13751 1172 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 CCDC40Q4G0X9 1142 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.9□□□□□ -0.82
ATG4A-203ENST00000372232 SMARCC1Q92922 1105 aaPredicted RBP9.9□□□□□ -0.82
ATG4A-203ENST00000372232 RSRC1Q96IZ7 334 aaKnown RBP9.9□□□□□ -0.82
ATG4A-203ENST00000372232 SLC4A9Q96Q91 983 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 NAT10Q9H0A0 1025 aaKnown RBP9.9□□□□□ -0.82
ATG4A-203ENST00000372232 KAT14Q9H8E8 782 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 SUGCTQ9HAC7 445 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 LRP6O75581 1613 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 GOLGA6L9A6NEM1 432 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 LRRIQ3A6PVS8 624 aaPredicted RBP9.9□□□□□ -0.82
ATG4A-203ENST00000372232 BECN2A8MW95 431 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 EIF3HO15372 352 aaKnown RBP eCLIP9.9□□□□□ -0.82
ATG4A-203ENST00000372232 ZSCAN12O43309 604 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 IFIT1P09914 478 aaKnown RBP9.9□□□□□ -0.82
ATG4A-203ENST00000372232 CYP19A1P11511 503 aaPredicted RBP9.9□□□□□ -0.82
ATG4A-203ENST00000372232 ALDH1B1P30837 517 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 SLC8A1P32418 973 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 GBP2P32456 591 aaPredicted RBP9.9□□□□□ -0.82
ATG4A-203ENST00000372232 FANCCQ00597 558 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 HLFQ16534 295 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 ZMYM1Q5SVZ6 1142 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 CWF19L1Q69YN2 538 aaKnown RBP9.9□□□□□ -0.82
ATG4A-203ENST00000372232 NOP9Q86U38 636 aaKnown RBP9.9□□□□□ -0.82
ATG4A-203ENST00000372232 RETREG3Q86VR2 466 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 FAM228AQ86W67 206 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 MYLK4Q86YV6 388 aaPredicted RBP9.9□□□□□ -0.82
ATG4A-203ENST00000372232 KIRREL3Q8IZU9 778 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 IGSF22Q8N9C0 903 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 BCAS4Q8TDM0 211 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 OSBPL9Q96SU4 736 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 PCDHB9Q9Y5E1 797 aa9.9□□□□□ -0.82
ATG4A-203ENST00000372232 GRIN2DO15399 1336 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 SPATA31A6Q5VVP1 1343 aa9.89□□□□□ -0.83
ATG4A-203ENST00000372232 DNAJA1P31689 397 aaKnown RBP9.89□□□□□ -0.83
ATG4A-203ENST00000372232 FKBP4Q02790 459 aaKnown RBP eCLIP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms