RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 COMMD10Q9Y6G5 202 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 WDR19Q8NEZ3 1342 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 PRKAB2O43741 272 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 OAS2P29728 719 aaKnown RBP13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 MAEAQ7L5Y9 396 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 OTUD6AQ7L8S5 288 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 KLHL7Q8IXQ5 586 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 RABGGTAQ92696 567 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 TUBGCP2Q9BSJ2 902 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 AMNQ9BXJ7 453 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 AMFRQ9UKV5 643 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 FRMPD2Q68DX3 1309 aaPredicted RBP13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 ABCA6Q8N139 1617 aa13.08□□□□□ -0.31
DEPDC1-201ENST00000370966 HPDP32754 393 aaPredicted RBP13.08□□□□□ -0.31
DEPDC1-201ENST00000370966 TOB2Q14106 344 aaPredicted RBP13.08□□□□□ -0.31
DEPDC1-201ENST00000370966 CCDC6Q16204 474 aa13.08□□□□□ -0.31
DEPDC1-201ENST00000370966 CNKSR1Q969H4 720 aa13.08□□□□□ -0.31
DEPDC1-201ENST00000370966 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.08□□□□□ -0.31
DEPDC1-201ENST00000370966 PIH1D3Q9NQM4 214 aaKnown RBP13.08□□□□□ -0.31
DEPDC1-201ENST00000370966 GJA3Q9Y6H8 435 aa13.08□□□□□ -0.31
DEPDC1-201ENST00000370966 ABCC12Q96J65 1359 aa13.08□□□□□ -0.31
DEPDC1-201ENST00000370966 N4BP1O75113 896 aaKnown RBP13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 ALDH3A1P30838 453 aa13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 SNX16P57768 344 aa13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 DYNLL1P63167 89 aaKnown RBP13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 NR5A1Q13285 461 aa13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 MIER3Q7Z3K6 550 aa13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 KRT26Q7Z3Y9 468 aa13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 KIFC2Q96AC6 838 aa13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 SMC6Q96SB8 1091 aa13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 RAB17Q9H0T7 212 aa13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 SLC39A2Q9NP94 309 aa13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 CDC23Q9UJX2 597 aa13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 TULP4Q9NRJ4 1543 aa13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 POLR2MP0CAP2 368 aa13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 KIAA0825Q8IV33 1275 aa13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 PAXIP1Q6ZW49 1069 aaPredicted RBP13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 FAM178BQ8IXR5 827 aa13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 LARP4BQ92615 738 aaKnown RBP13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 STK17AQ9UEE5 414 aa13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 AGTPBP1Q9UPW5 1226 aa13.08□□□□□ -0.32
DEPDC1-201ENST00000370966 NOP56O00567 594 aaKnown RBP13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 CASP14P31944 242 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 MCAMP43121 646 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 ADAM9Q13443 819 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 TSC1Q92574 1164 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 ALDH8A1Q9H2A2 487 aaPredicted RBP13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 AZI2Q9H6S1 392 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 BSDC1Q9NW68 430 aaPredicted RBP13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 ASIC3Q9UHC3 531 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 DDX41Q9UJV9 622 aaKnown RBP13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 H2AFZP0C0S5 128 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 CCDC14Q49A88 953 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 ERFEQ4G0M1 354 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 ARL6IP4Q66PJ3 421 aaKnown RBP13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 H2AFVQ71UI9 128 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 DGKHQ86XP1 1220 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 PPP1R13BQ96KQ4 1090 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 RIC8AQ9NPQ8 531 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 SOS2Q07890 1332 aaPredicted RBP13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 SLC8A3P57103 927 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 ZNF658Q5TYW1 1059 aaPredicted RBP13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 ZBTB9Q96C00 473 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 BRIP1Q9BX63 1249 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 RASSF4Q9H2L5 321 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 PARP2Q9UGN5 583 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 MKRN1Q9UHC7 482 aaKnown RBP13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 SERPINB13Q9UIV8 391 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 MAN1B1Q9UKM7 699 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 CDHR2Q9BYE9 1310 aa13.07□□□□□ -0.32
DEPDC1-201ENST00000370966 NDC80O14777 642 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 TTLL1O95922 423 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 GAS8O95995 478 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 APBA3O96018 575 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 RCAN1P53805 252 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 MAP3K9P80192 1104 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 MXRA7P84157 204 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 ARHGAP44Q17R89 818 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 TSGA10IPQ3SY00 556 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 GNPTABQ3T906 1256 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 CNOT6LQ96LI5 555 aaKnown RBP13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 UIMC1Q96RL1 719 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 TRIM31Q9BZY9 425 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 AXIN2Q9Y2T1 843 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 THRAP3Q9Y2W1 955 aaKnown RBP13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 TSPOAP1O95153 1857 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 VIMP08670 466 aaKnown RBP13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 TRIM28Q13263 835 aaKnown RBP13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 TTC31Q49AM3 519 aaPredicted RBP13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 DCUN1D2Q6PH85 259 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 SARM1Q6SZW1 724 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 CCDC63Q8NA47 563 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 P2RX5Q93086 422 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 BZW2Q9Y6E2 419 aaKnown RBP13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 QRICH2Q9H0J4 1663 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 H0YCG3 227 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 SCNN1DP51172 638 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 SUSD4Q5VX71 490 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms