RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 HOMER2Q9NSB8 354 aa12.99□□□□□ -0.33
EXOSC1-202ENST00000370885 TCP11L1Q9NUJ3 509 aa12.99□□□□□ -0.33
EXOSC1-202ENST00000370885 FRMPD2Q68DX3 1309 aaPredicted RBP12.98□□□□□ -0.33
EXOSC1-202ENST00000370885 DNM1LO00429 736 aa12.98□□□□□ -0.33
EXOSC1-202ENST00000370885 MSCO60682 206 aa12.98□□□□□ -0.33
EXOSC1-202ENST00000370885 PLA2G6O60733 806 aa12.98□□□□□ -0.33
EXOSC1-202ENST00000370885 PGK1P00558 417 aa12.98□□□□□ -0.33
EXOSC1-202ENST00000370885 PTGS1P23219 599 aa12.98□□□□□ -0.33
EXOSC1-202ENST00000370885 COPB2P35606 906 aa12.98□□□□□ -0.33
EXOSC1-202ENST00000370885 OAZ1P54368 228 aa12.98□□□□□ -0.33
EXOSC1-202ENST00000370885 TTC22Q5TAA0 569 aa12.98□□□□□ -0.33
EXOSC1-202ENST00000370885 CCDC174Q6PII3 467 aa12.98□□□□□ -0.33
EXOSC1-202ENST00000370885 MAMDC4Q6UXC1 1216 aa12.98□□□□□ -0.33
EXOSC1-202ENST00000370885 PURBQ96QR8 312 aaKnown RBP12.98□□□□□ -0.33
EXOSC1-202ENST00000370885 KATNBL1Q9H079 304 aa12.98□□□□□ -0.33
EXOSC1-202ENST00000370885 SLC5A4Q9NY91 659 aa12.98□□□□□ -0.33
EXOSC1-202ENST00000370885 SOWAHBA6NEL2 793 aa12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 PDHBP11177 359 aa12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 ADCYAP1R1P41586 468 aa12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 MAGEA10P43363 369 aaPredicted RBP12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 BTNL9Q6UXG8 535 aa12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 MFSD6Q6ZSS7 791 aa12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 FAM160B2Q86V87 743 aa12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 SKAP1Q86WV1 359 aa12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 FAM133AQ8N9E0 248 aa12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 CHST13Q8NET6 341 aa12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 CHURC1Q8WUH1 139 aa12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 FERMT2Q96AC1 680 aa12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 DDX11Q96FC9 970 aa12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 CPVLQ9H3G5 476 aa12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 GPCPD1Q9NPB8 672 aa12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 A1CFQ9NQ94 594 aaKnown RBP12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 DIAPH3Q9NSV4 1193 aa12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 ISY1Q9ULR0 285 aaKnown RBP12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 TAF6LQ9Y6J9 622 aa12.97□□□□□ -0.33
EXOSC1-202ENST00000370885 MYADML2A6NDP7 307 aa12.96□□□□□ -0.33
EXOSC1-202ENST00000370885 ADAMTS4O75173 837 aa12.96□□□□□ -0.33
EXOSC1-202ENST00000370885 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.33
EXOSC1-202ENST00000370885 SNHG28P0DPA3 235 aa12.96□□□□□ -0.33
EXOSC1-202ENST00000370885 TOP1P11387 765 aaKnown RBP12.96□□□□□ -0.33
EXOSC1-202ENST00000370885 TMEM63BQ5T3F8 832 aa12.96□□□□□ -0.33
EXOSC1-202ENST00000370885 SLC39A5Q6ZMH5 540 aa12.96□□□□□ -0.33
EXOSC1-202ENST00000370885 ANKRD35Q8N283 1001 aa12.96□□□□□ -0.33
EXOSC1-202ENST00000370885 DCAF4Q8WV16 495 aa12.96□□□□□ -0.33
EXOSC1-202ENST00000370885 TRERF1Q96PN7 1200 aa12.96□□□□□ -0.33
EXOSC1-202ENST00000370885 RANBP17Q9H2T7 1088 aaKnown RBP12.96□□□□□ -0.33
EXOSC1-202ENST00000370885 RNF146Q9NTX7 359 aa12.96□□□□□ -0.33
EXOSC1-202ENST00000370885 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.96□□□□□ -0.33
EXOSC1-202ENST00000370885 NRBP1Q9UHY1 535 aa12.96□□□□□ -0.33
EXOSC1-202ENST00000370885 SYNGAP1Q96PV0 1343 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 B4E1Z4 1266 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 ZNF213O14771 459 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 KDM4AO75164 1064 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 GOLGA8HP0CJ92 632 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 ALAS1P13196 640 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 BMP8BP34820 402 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 RTP1P59025 263 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 PTH1RQ03431 593 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 IKQ13123 557 aaPredicted RBP12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 CCDC96Q2M329 555 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 ARMCX2Q7L311 632 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 ZNF467Q7Z7K2 595 aaPredicted RBP12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 CCDC144CPQ8IYA2 1237 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 ARRDC4Q8NCT1 418 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 LRCH3Q96II8 777 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 DSCC1Q9BVC3 393 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 XPNPEP3Q9NQH7 507 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 ZSWIM5Q9P217 1185 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 CTDP1Q9Y5B0 961 aaPredicted RBP12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 LRRC37A2A6NM11 1700 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 LTBP2Q14767 1821 aa12.95□□□□□ -0.34
EXOSC1-202ENST00000370885 COL6A3P12111 3177 aa12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 CTAGE5O15320 804 aa12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 FDX1P10109 184 aa12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 CHMLP26374 656 aa12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 MDM2Q00987 491 aaPredicted RBP12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 ZNF543Q08ER8 600 aa12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 ACVR2BQ13705 512 aa12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 SNX17Q15036 470 aa12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 TRIM60Q495X7 471 aa12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 PPP4R3BQ5MIZ7 849 aa12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 SYDE2Q5VT97 1194 aa12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 CCSAPQ6IQ19 270 aaPredicted RBP12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 SH3RF1Q7Z6J0 888 aa12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 MSL3Q8N5Y2 521 aaKnown RBP12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 KLHDC9Q8NEP7 349 aa12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 CLEC4DQ8WXI8 215 aa12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 TTC14Q96N46 770 aa12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 ACAD9Q9H845 621 aa12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 CYP39A1Q9NYL5 469 aa12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 FBXO40Q9UH90 709 aa12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 ZHX1Q9UKY1 873 aaPredicted RBP12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 PHF24Q9UPV7 400 aa12.94□□□□□ -0.34
EXOSC1-202ENST00000370885 SYNRGQ9UMZ2 1314 aa12.93□□□□□ -0.34
EXOSC1-202ENST00000370885 POTEB2H3BUK9 544 aa12.93□□□□□ -0.34
EXOSC1-202ENST00000370885 NFIBO00712 420 aa12.93□□□□□ -0.34
EXOSC1-202ENST00000370885 ICAM1P05362 532 aa12.93□□□□□ -0.34
EXOSC1-202ENST00000370885 RARBP10826 455 aa12.93□□□□□ -0.34
EXOSC1-202ENST00000370885 AKR1A1P14550 325 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms