RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 CTDSPL2Q05D32 466 aa19.06■□□□□ 0.64
VMA21-202ENST00000370361 CHD1LQ86WJ1 897 aa19.06■□□□□ 0.64
VMA21-202ENST00000370361 PCSK9Q8NBP7 692 aaKnown RBP19.06■□□□□ 0.64
VMA21-202ENST00000370361 LRCH3Q96II8 777 aa19.06■□□□□ 0.64
VMA21-202ENST00000370361 LNPKQ9C0E8 428 aa19.06■□□□□ 0.64
VMA21-202ENST00000370361 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.06■□□□□ 0.64
VMA21-202ENST00000370361 TACC3Q9Y6A5 838 aa19.06■□□□□ 0.64
VMA21-202ENST00000370361 MROH7Q68CQ1 1323 aa19.05■□□□□ 0.64
VMA21-202ENST00000370361 LTBP2Q14767 1821 aa19.05■□□□□ 0.64
VMA21-202ENST00000370361 LOC102724159A0A0B4J2E5 919 aa19.05■□□□□ 0.64
VMA21-202ENST00000370361 A0A0D9SFI3 127 aa19.05■□□□□ 0.64
VMA21-202ENST00000370361 POTEB2H3BUK9 544 aa19.05■□□□□ 0.64
VMA21-202ENST00000370361 ADAMTS4O75173 837 aa19.05■□□□□ 0.64
VMA21-202ENST00000370361 SNAI1O95863 264 aaPredicted RBP19.05■□□□□ 0.64
VMA21-202ENST00000370361 HSPD1P10809 573 aaKnown RBP19.05■□□□□ 0.64
VMA21-202ENST00000370361 TOP1P11387 765 aaKnown RBP19.05■□□□□ 0.64
VMA21-202ENST00000370361 MCCP23508 829 aa19.05■□□□□ 0.64
VMA21-202ENST00000370361 ACVR2BQ13705 512 aa19.05■□□□□ 0.64
VMA21-202ENST00000370361 PWP2Q15269 919 aaKnown RBP19.05■□□□□ 0.64
VMA21-202ENST00000370361 TRIM60Q495X7 471 aa19.05■□□□□ 0.64
VMA21-202ENST00000370361 VPS53Q5VIR6 699 aa19.05■□□□□ 0.64
VMA21-202ENST00000370361 FAM227BQ96M60 508 aa19.05■□□□□ 0.64
VMA21-202ENST00000370361 TTC14Q96N46 770 aa19.05■□□□□ 0.64
VMA21-202ENST00000370361 TOX2Q96NM4 488 aa19.05■□□□□ 0.64
VMA21-202ENST00000370361 ZHX1Q9UKY1 873 aaPredicted RBP19.05■□□□□ 0.64
VMA21-202ENST00000370361 SYNRGQ9UMZ2 1314 aa19.04■□□□□ 0.64
VMA21-202ENST00000370361 PGK1P00558 417 aa19.04■□□□□ 0.64
VMA21-202ENST00000370361 TAL1P17542 331 aaPredicted RBP19.04■□□□□ 0.64
VMA21-202ENST00000370361 SLC4A3P48751 1232 aa19.04■□□□□ 0.64
VMA21-202ENST00000370361 NUCB1Q02818 461 aa19.04■□□□□ 0.64
VMA21-202ENST00000370361 ARMCX2Q7L311 632 aa19.04■□□□□ 0.64
VMA21-202ENST00000370361 FAM133AQ8N9E0 248 aa19.04■□□□□ 0.64
VMA21-202ENST00000370361 KLHDC9Q8NEP7 349 aa19.04■□□□□ 0.64
VMA21-202ENST00000370361 TOMM22Q9NS69 142 aa19.04■□□□□ 0.64
VMA21-202ENST00000370361 RNF146Q9NTX7 359 aa19.04■□□□□ 0.64
VMA21-202ENST00000370361 ZNF536O15090 1300 aa19.03■□□□□ 0.64
VMA21-202ENST00000370361 ELP1O95163 1332 aa19.03■□□□□ 0.64
VMA21-202ENST00000370361 A0A1W2PQ45 241 aaPredicted RBP19.03■□□□□ 0.64
VMA21-202ENST00000370361 A0A1W2PQY0 241 aa19.03■□□□□ 0.64
VMA21-202ENST00000370361 ICAM1P05362 532 aa19.03■□□□□ 0.64
VMA21-202ENST00000370361 NKX3-2P78367 333 aa19.03■□□□□ 0.64
VMA21-202ENST00000370361 CCDC178Q5BJE1 867 aa19.03■□□□□ 0.64
VMA21-202ENST00000370361 FAM109BQ6ICB4 259 aaPredicted RBP19.03■□□□□ 0.64
VMA21-202ENST00000370361 BTNL9Q6UXG8 535 aa19.03■□□□□ 0.64
VMA21-202ENST00000370361 MFSD6Q6ZSS7 791 aa19.03■□□□□ 0.64
VMA21-202ENST00000370361 ANKRD33Q7Z3H0 272 aa19.03■□□□□ 0.64
VMA21-202ENST00000370361 UPF3AQ9H1J1 476 aaKnown RBP19.03■□□□□ 0.64
VMA21-202ENST00000370361 PRDM5Q9NQX1 630 aaPredicted RBP19.03■□□□□ 0.64
VMA21-202ENST00000370361 PDLIM7Q9NR12 457 aa19.03■□□□□ 0.64
VMA21-202ENST00000370361 PRR12Q9ULL5 1215 aa19.03■□□□□ 0.64
VMA21-202ENST00000370361 CLTBP09497 229 aa19.02■□□□□ 0.64
VMA21-202ENST00000370361 ACLYP53396 1101 aa19.02■□□□□ 0.64
VMA21-202ENST00000370361 NMIQ13287 307 aaPredicted RBP19.02■□□□□ 0.64
VMA21-202ENST00000370361 CCDC96Q2M329 555 aa19.02■□□□□ 0.64
VMA21-202ENST00000370361 AKNAD1Q5T1N1 836 aa19.02■□□□□ 0.64
VMA21-202ENST00000370361 KCTD1Q719H9 257 aa19.02■□□□□ 0.64
VMA21-202ENST00000370361 RILPL2Q969X0 211 aa19.02■□□□□ 0.64
VMA21-202ENST00000370361 FERMT2Q96AC1 680 aa19.02■□□□□ 0.64
VMA21-202ENST00000370361 GLT1D1Q96MS3 346 aa19.02■□□□□ 0.64
VMA21-202ENST00000370361 TRERF1Q96PN7 1200 aa19.02■□□□□ 0.64
VMA21-202ENST00000370361 SEZ6LQ9BYH1 1024 aa19.02■□□□□ 0.64
VMA21-202ENST00000370361 A1CFQ9NQ94 594 aaKnown RBP19.02■□□□□ 0.64
VMA21-202ENST00000370361 STARD7Q9NQZ5 370 aa19.02■□□□□ 0.64
VMA21-202ENST00000370361 HOMER2Q9NSB8 354 aa19.02■□□□□ 0.64
VMA21-202ENST00000370361 DCDC2CA8MYV0 355 aa19.01■□□□□ 0.63
VMA21-202ENST00000370361 NMT2O60551 498 aa19.01■□□□□ 0.63
VMA21-202ENST00000370361 SDSP20132 328 aa19.01■□□□□ 0.63
VMA21-202ENST00000370361 GJA9P57773 515 aa19.01■□□□□ 0.63
VMA21-202ENST00000370361 TLE2Q04725 743 aa19.01■□□□□ 0.63
VMA21-202ENST00000370361 CCDC144BQ3MJ40 725 aa19.01■□□□□ 0.63
VMA21-202ENST00000370361 ZNF589Q86UQ0 364 aaPredicted RBP19.01■□□□□ 0.63
VMA21-202ENST00000370361 PLEKHM2Q8IWE5 1019 aa19.01■□□□□ 0.63
VMA21-202ENST00000370361 CCDC144CPQ8IYA2 1237 aa19.01■□□□□ 0.63
VMA21-202ENST00000370361 DEFB123Q8N688 67 aa19.01■□□□□ 0.63
VMA21-202ENST00000370361 ESR2Q92731 530 aa19.01■□□□□ 0.63
VMA21-202ENST00000370361 FGD4Q96M96 766 aa19.01■□□□□ 0.63
VMA21-202ENST00000370361 AGBL1Q96MI9 1066 aa19.01■□□□□ 0.63
VMA21-202ENST00000370361 MAF1Q9H063 256 aa19.01■□□□□ 0.63
VMA21-202ENST00000370361 RANBP17Q9H2T7 1088 aaKnown RBP19.01■□□□□ 0.63
VMA21-202ENST00000370361 CCPG1Q9ULG6 757 aa19.01■□□□□ 0.63
VMA21-202ENST00000370361 KIAA0355O15063 1070 aa19■□□□□ 0.63
VMA21-202ENST00000370361 ALAS1P13196 640 aa19■□□□□ 0.63
VMA21-202ENST00000370361 KCNA10Q16322 511 aa19■□□□□ 0.63
VMA21-202ENST00000370361 RRP12Q5JTH9 1297 aaKnown RBP19■□□□□ 0.63
VMA21-202ENST00000370361 CCSAPQ6IQ19 270 aaPredicted RBP19■□□□□ 0.63
VMA21-202ENST00000370361 TMEM47Q9BQJ4 181 aa19■□□□□ 0.63
VMA21-202ENST00000370361 DIAPH3Q9NSV4 1193 aa19■□□□□ 0.63
VMA21-202ENST00000370361 ADD3Q9UEY8 706 aaKnown RBP19■□□□□ 0.63
VMA21-202ENST00000370361 CABYRO75952 493 aa18.99■□□□□ 0.63
VMA21-202ENST00000370361 C6orf222P0C671 652 aaPredicted RBP18.99■□□□□ 0.63
VMA21-202ENST00000370361 GPATCH4Q5T3I0 446 aaKnown RBP18.99■□□□□ 0.63
VMA21-202ENST00000370361 SYDE2Q5VT97 1194 aa18.99■□□□□ 0.63
VMA21-202ENST00000370361 IQCA1Q86XH1 822 aa18.99■□□□□ 0.63
VMA21-202ENST00000370361 MPHOSPH6Q99547 160 aaKnown RBP18.99■□□□□ 0.63
VMA21-202ENST00000370361 INCENPQ9NQS7 918 aa18.99■□□□□ 0.63
VMA21-202ENST00000370361 CYP39A1Q9NYL5 469 aa18.99■□□□□ 0.63
VMA21-202ENST00000370361 Q9Y3F1 56 aa18.99■□□□□ 0.63
VMA21-202ENST00000370361 SUPT16HQ9Y5B9 1047 aaKnown RBP18.99■□□□□ 0.63
VMA21-202ENST00000370361 LAMA4Q16363 1823 aa18.98■□□□□ 0.63
VMA21-202ENST00000370361 ZNF213O14771 459 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms