RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 CFAP100Q494V2 611 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 GALNT17Q6IS24 598 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 USP17L2Q6R6M4 530 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 BLIDQ8IZY5 108 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 VPS33BQ9H267 617 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 HPSEQ9Y251 543 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 PCDHAC2Q9Y5I4 1007 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.3□□□□□ -0.63e-7■■■□□ 15.9
PRPF38B-203ENST00000370025 FAM237AA0A1B0GTK4 181 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 KCNA3P22001 575 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 TRAPPC10P48553 1259 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 NPY5RQ15761 445 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 HEATR3Q7Z4Q2 680 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 ZNF579Q8NAF0 562 aaKnown RBP11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 CCDC12Q8WUD4 166 aaPredicted RBP11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 GPKOWQ92917 476 aaPredicted RBP eCLIP11.29□□□□□ -0.64e-9■■■■■ 27.3
PRPF38B-203ENST00000370025 TNFRSF25Q93038 417 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 RRP36Q96EU6 259 aaKnown RBP11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 SEC63Q9UGP8 760 aaKnown RBP11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 HDAC9Q9UKV0 1011 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 SRPRBQ9Y5M8 271 aaKnown RBP11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 CYTH3O43739 400 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 VEGFAP15692 232 aaPredicted RBP11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 IBSPP21815 317 aaPredicted RBP11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 TGFB2P61812 414 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 FOXP4Q8IVH2 680 aaPredicted RBP11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 ZFPM1Q8IX07 1006 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 TMOD2Q9NZR1 351 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 PIM2Q9P1W9 311 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 KIAA1468Q9P260 1216 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 FBXO2Q9UK22 296 aaPredicted RBP11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 PCDHA4Q9UN74 947 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 IGKV6D-41A0A0C4DH26 115 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 FAM205CA6NFA0 338 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 H2AFXP16104 143 aaPredicted RBP11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 NOP2P46087 812 aaKnown RBP11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 ASPRV1Q53RT3 343 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 TTC38Q5R3I4 469 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 RSBN1LQ6PCB5 846 aaPredicted RBP11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 PIK3AP1Q6ZUJ8 805 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 ZNF277Q9NRM2 450 aaPredicted RBP11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 VPS18Q9P253 973 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 FAM198AQ9UFP1 575 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 KCNH3Q9ULD8 1083 aa11.29□□□□□ -0.6
PRPF38B-203ENST00000370025 USP17L5A8MUK1 530 aa11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 EIF6P56537 245 aaKnown RBP11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 EARS2Q5JPH6 523 aaKnown RBP11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 PPP1R13BQ96KQ4 1090 aa11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 NAT10Q9H0A0 1025 aaKnown RBP11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 TDRD3Q9H7E2 651 aaKnown RBP11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 BARHL2Q9NY43 387 aa11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 ENTPD3O75355 529 aa11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 ZBTB7AO95365 584 aa11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 PDHBP11177 359 aa11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 ICE2Q659A1 982 aa11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 E4F1Q66K89 784 aaPredicted RBP11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 WWC2Q6AWC2 1192 aa11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 LRRC47Q8N1G4 583 aaKnown RBP11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 OGFOD1Q8N543 542 aa11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 CWC15Q9P013 229 aaKnown RBP11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 HOOK1Q9UJC3 728 aaKnown RBP11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 ZNF646O15015 1829 aaPredicted RBP11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 RAD17O75943 681 aa11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 ATP2B2Q01814 1243 aa11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 ZNF174Q15697 407 aa11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 CERKLQ49MI3 558 aaPredicted RBP11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 NIM1KQ8IY84 436 aa11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 GOLGA6L1Q8N7Z2 621 aa11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 FERMT2Q96AC1 680 aa11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 RABEP2Q9H5N1 569 aa11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 VAT1LQ9HCJ6 419 aa11.28□□□□□ -0.6
PRPF38B-203ENST00000370025 CCDC194A0A1B0GVG4 234 aa11.27□□□□□ -0.6
PRPF38B-203ENST00000370025 DDTLA6NHG4 134 aaPredicted RBP11.27□□□□□ -0.6
PRPF38B-203ENST00000370025 SLC35G1Q2M3R5 365 aa11.27□□□□□ -0.6
PRPF38B-203ENST00000370025 CEP57L1Q8IYX8 460 aa11.27□□□□□ -0.6
PRPF38B-203ENST00000370025 PRMT6Q96LA8 375 aaPredicted RBP11.27□□□□□ -0.6
PRPF38B-203ENST00000370025 ATF5Q9Y2D1 282 aaPredicted RBP11.27□□□□□ -0.6
PRPF38B-203ENST00000370025 STXBP3O00186 592 aa11.27□□□□□ -0.61
PRPF38B-203ENST00000370025 PSMD14O00487 310 aa11.27□□□□□ -0.61
PRPF38B-203ENST00000370025 VIL1P09327 827 aaKnown RBP11.27□□□□□ -0.61
PRPF38B-203ENST00000370025 NAPAP54920 295 aa11.27□□□□□ -0.61
PRPF38B-203ENST00000370025 DAGLBQ8NCG7 672 aa11.27□□□□□ -0.61
PRPF38B-203ENST00000370025 CNNM3Q8NE01 707 aa11.27□□□□□ -0.61
PRPF38B-203ENST00000370025 EFCC1Q9HA90 598 aa11.27□□□□□ -0.61
PRPF38B-203ENST00000370025 JRKLQ9Y4A0 524 aa11.27□□□□□ -0.61
PRPF38B-203ENST00000370025 SFPQP23246 707 aaKnown RBP eCLIP11.27□□□□□ -0.61
PRPF38B-203ENST00000370025 SPECC1Q5M775 1068 aa11.27□□□□□ -0.61
PRPF38B-203ENST00000370025 LEKR1Q6ZMV7 388 aa11.27□□□□□ -0.61
PRPF38B-203ENST00000370025 CPVLQ9H3G5 476 aa11.27□□□□□ -0.61
PRPF38B-203ENST00000370025 FAM53CQ9NYF3 392 aa11.27□□□□□ -0.61
PRPF38B-203ENST00000370025 IFNKQ9P0W0 207 aa11.27□□□□□ -0.61
PRPF38B-203ENST00000370025 ADAM21Q9UKJ8 722 aa11.27□□□□□ -0.61
PRPF38B-203ENST00000370025 GNA11P29992 359 aa11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 DLGAP5Q15398 846 aa11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 TTC31Q49AM3 519 aaPredicted RBP11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 RASGRP2Q7LDG7 609 aa11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 UBA5Q9GZZ9 404 aa11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 MTFR1LQ9H019 292 aa11.26□□□□□ -0.61
PRPF38B-203ENST00000370025 RIOX1Q9H6W3 641 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms