RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 HERVK_113P62684 666 aa12.21□□□□□ -0.45
LRIF1-201ENST00000369763 STK4Q13043 487 aa12.21□□□□□ -0.45
LRIF1-201ENST00000369763 CCDC96Q2M329 555 aa12.21□□□□□ -0.45
LRIF1-201ENST00000369763 TGFBRAP1Q8WUH2 860 aa12.21□□□□□ -0.45
LRIF1-201ENST00000369763 TUBGCP2Q9BSJ2 902 aa12.21□□□□□ -0.45
LRIF1-201ENST00000369763 UBXN6Q9BZV1 441 aa12.21□□□□□ -0.45
LRIF1-201ENST00000369763 BAZ2AQ9UIF9 1905 aaKnown RBP12.21□□□□□ -0.45
LRIF1-201ENST00000369763 MAP2K7O14733 419 aa12.21□□□□□ -0.45
LRIF1-201ENST00000369763 IPO7O95373 1038 aaKnown RBP12.21□□□□□ -0.45
LRIF1-201ENST00000369763 BMP15O95972 392 aa12.21□□□□□ -0.45
LRIF1-201ENST00000369763 TSPY3P0CV98 308 aa12.21□□□□□ -0.45
LRIF1-201ENST00000369763 TSPY8P0CW00 308 aa12.21□□□□□ -0.45
LRIF1-201ENST00000369763 IDEP14735 1019 aa12.21□□□□□ -0.45
LRIF1-201ENST00000369763 NAP1L1P55209 391 aaKnown RBP12.21□□□□□ -0.45
LRIF1-201ENST00000369763 PIP4K2BP78356 416 aa12.21□□□□□ -0.45
LRIF1-201ENST00000369763 SLC7A5Q01650 507 aa12.21□□□□□ -0.45
LRIF1-201ENST00000369763 PTPROQ16827 1216 aa12.21□□□□□ -0.45
LRIF1-201ENST00000369763 RCSD1Q6JBY9 416 aa12.21□□□□□ -0.45
LRIF1-201ENST00000369763 WDR59Q6PJI9 974 aa12.21□□□□□ -0.45
LRIF1-201ENST00000369763 UBA5Q9GZZ9 404 aa12.21□□□□□ -0.45
LRIF1-201ENST00000369763 PSMA7O14818 248 aa12.21□□□□□ -0.46
LRIF1-201ENST00000369763 EIF3JO75822 258 aaKnown RBP12.21□□□□□ -0.46
LRIF1-201ENST00000369763 CALM1P0DP23 149 aa12.21□□□□□ -0.46
LRIF1-201ENST00000369763 CALM2P0DP24 149 aa12.21□□□□□ -0.46
LRIF1-201ENST00000369763 CALM3P0DP25 149 aa12.21□□□□□ -0.46
LRIF1-201ENST00000369763 MYBL2P10244 700 aa12.21□□□□□ -0.46
LRIF1-201ENST00000369763 PLCG1P19174 1290 aa12.21□□□□□ -0.46
LRIF1-201ENST00000369763 HIBADHP31937 336 aaKnown RBP12.21□□□□□ -0.46
LRIF1-201ENST00000369763 RNASE9P60153 205 aaKnown RBP12.21□□□□□ -0.46
LRIF1-201ENST00000369763 EZH2Q15910 746 aaKnown RBP12.21□□□□□ -0.46
LRIF1-201ENST00000369763 GRIK5Q16478 980 aa12.21□□□□□ -0.46
LRIF1-201ENST00000369763 JAKMIP2Q96AA8 810 aa12.21□□□□□ -0.46
LRIF1-201ENST00000369763 IL17RBQ9NRM6 502 aa12.21□□□□□ -0.46
LRIF1-201ENST00000369763 SAR1BQ9Y6B6 198 aa12.21□□□□□ -0.46
LRIF1-201ENST00000369763 TXKP42681 527 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 TXNRD1Q16881 649 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 USP17L2Q6R6M4 530 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 PTF1AQ7RTS3 328 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 CCDC155Q8N6L0 562 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 NOC4LQ9BVI4 516 aaKnown RBP12.2□□□□□ -0.46
LRIF1-201ENST00000369763 ANKIB1Q9P2G1 1089 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 MYH8P13535 1937 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 ATP8B1O43520 1251 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 DDAH1O94760 285 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 SPAG1Q07617 926 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 PARP10Q53GL7 1025 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 ADSSL1Q8N142 457 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 MMRN2Q9H8L6 949 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 BIN2Q9UBW5 565 aaPredicted RBP12.2□□□□□ -0.46
LRIF1-201ENST00000369763 LRWD1Q9UFC0 647 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 ANAPC4Q9UJX5 808 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 COL4A1P02462 1669 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 EP400Q96L91 3159 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 PDE2AO00408 941 aaPredicted RBP12.2□□□□□ -0.46
LRIF1-201ENST00000369763 CYTH3O43739 400 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 LRRC41Q15345 812 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 SLC35G1Q2M3R5 365 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 ANKRD40Q6AI12 368 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 SH3RF3Q8TEJ3 882 aaPredicted RBP12.2□□□□□ -0.46
LRIF1-201ENST00000369763 BRIP1Q9BX63 1249 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 TANGO6Q9C0B7 1094 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 NHEJ1Q9H9Q4 299 aaPredicted RBP12.2□□□□□ -0.46
LRIF1-201ENST00000369763 MLXIPQ9HAP2 919 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 ZNHIT6Q9NWK9 470 aaKnown RBP12.2□□□□□ -0.46
LRIF1-201ENST00000369763 RMND1Q9NWS8 449 aa12.2□□□□□ -0.46
LRIF1-201ENST00000369763 PLEKHG2Q9H7P9 1386 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 TULP1O00294 542 aaPredicted RBP12.19□□□□□ -0.46
LRIF1-201ENST00000369763 SSBP05455 408 aaKnown RBP eCLIP12.19□□□□□ -0.46
LRIF1-201ENST00000369763 KIF5BP33176 963 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 NAPAP54920 295 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 ARID5AQ03989 594 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 STIM1Q13586 685 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 TBC1D9BQ66K14 1250 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 C2CD5Q86YS7 1000 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 HDAC7Q8WUI4 952 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 CNOT6LQ96LI5 555 aaKnown RBP12.19□□□□□ -0.46
LRIF1-201ENST00000369763 DEF6Q9H4E7 631 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 LGALS16A8MUM7 142 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 H7C1D1 291 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 RNF40O75150 1001 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 WHAMMP3Q1A5X7 153 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 PLCD3Q8N3E9 789 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 CCDC51Q96ER9 411 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 EXOC1Q9NV70 894 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 TBC1D7Q9P0N9 293 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 PCDHA6Q9UN73 950 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 PCDHA4Q9UN74 947 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 PCDHA8Q9Y5H6 950 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 MYO1CO00159 1063 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 EPHB6O15197 1021 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 NCK2O43639 380 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 ACTN2P35609 894 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 RPS8P62241 208 aaKnown RBP12.19□□□□□ -0.46
LRIF1-201ENST00000369763 PPP2R5BQ15173 497 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 TMC4Q7Z404 712 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 CABP7Q86V35 215 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 CLEC10AQ8IUN9 316 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 ZNF444Q8N0Y2 327 aaPredicted RBP12.19□□□□□ -0.46
LRIF1-201ENST00000369763 TMEM260Q9NX78 707 aa12.19□□□□□ -0.46
LRIF1-201ENST00000369763 FEZ2Q9UHY8 353 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms