RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 DIS3LQ8TF46 1054 aaKnown RBP24.15■■□□□ 1.46
SMNDC1-201ENST00000369592 FGD4Q96M96 766 aa24.15■■□□□ 1.46
SMNDC1-201ENST00000369592 AGBL1Q96MI9 1066 aa24.15■■□□□ 1.46
SMNDC1-201ENST00000369592 SEC23AQ15436 765 aa24.14■■□□□ 1.45
SMNDC1-201ENST00000369592 LSG1Q9H089 658 aaKnown RBP24.14■■□□□ 1.45
SMNDC1-201ENST00000369592 FBXO40Q9UH90 709 aa24.14■■□□□ 1.45
SMNDC1-201ENST00000369592 NRBP1Q9UHY1 535 aa24.14■■□□□ 1.45
SMNDC1-201ENST00000369592 MCM3APO60318 1980 aa24.13■■□□□ 1.45
SMNDC1-201ENST00000369592 CCDC96Q2M329 555 aa24.13■■□□□ 1.45
SMNDC1-201ENST00000369592 TKFCQ3LXA3 575 aa24.13■■□□□ 1.45
SMNDC1-201ENST00000369592 MAMDC4Q6UXC1 1216 aa24.13■■□□□ 1.45
SMNDC1-201ENST00000369592 CYB5R4Q7L1T6 521 aa24.13■■□□□ 1.45
SMNDC1-201ENST00000369592 PAWRQ96IZ0 340 aaKnown RBP24.13■■□□□ 1.45
SMNDC1-201ENST00000369592 TINF2Q9BSI4 451 aa24.13■■□□□ 1.45
SMNDC1-201ENST00000369592 ESYT1Q9BSJ8 1104 aa24.13■■□□□ 1.45
SMNDC1-201ENST00000369592 DDX20Q9UHI6 824 aaKnown RBP24.13■■□□□ 1.45
SMNDC1-201ENST00000369592 MTMR7Q9Y216 660 aa24.13■■□□□ 1.45
SMNDC1-201ENST00000369592 LCTP09848 1927 aa24.13■■□□□ 1.45
SMNDC1-201ENST00000369592 TNKSO95271 1327 aa24.12■■□□□ 1.45
SMNDC1-201ENST00000369592 COL6A1P12109 1028 aa24.12■■□□□ 1.45
SMNDC1-201ENST00000369592 SLC16A2P36021 539 aa24.12■■□□□ 1.45
SMNDC1-201ENST00000369592 SNAP25P60880 206 aa24.12■■□□□ 1.45
SMNDC1-201ENST00000369592 SYDE2Q5VT97 1194 aa24.12■■□□□ 1.45
SMNDC1-201ENST00000369592 STOX1Q6ZVD7 989 aa24.12■■□□□ 1.45
SMNDC1-201ENST00000369592 ZNF467Q7Z7K2 595 aaPredicted RBP24.12■■□□□ 1.45
SMNDC1-201ENST00000369592 MSL3Q8N5Y2 521 aaKnown RBP24.12■■□□□ 1.45
SMNDC1-201ENST00000369592 PNMA1Q8ND90 353 aa24.12■■□□□ 1.45
SMNDC1-201ENST00000369592 CTDP1Q9Y5B0 961 aaPredicted RBP24.12■■□□□ 1.45
SMNDC1-201ENST00000369592 FRMPD2Q68DX3 1309 aaPredicted RBP24.11■■□□□ 1.45
SMNDC1-201ENST00000369592 MSCO60682 206 aa24.11■■□□□ 1.45
SMNDC1-201ENST00000369592 ICAM1P05362 532 aa24.11■■□□□ 1.45
SMNDC1-201ENST00000369592 IKQ13123 557 aaPredicted RBP24.11■■□□□ 1.45
SMNDC1-201ENST00000369592 PRAMEF19Q5SWL8 479 aa24.11■■□□□ 1.45
SMNDC1-201ENST00000369592 GPCPD1Q9NPB8 672 aa24.11■■□□□ 1.45
SMNDC1-201ENST00000369592 RBM8AQ9Y5S9 174 aaKnown RBP24.11■■□□□ 1.45
SMNDC1-201ENST00000369592 SEPT4O43236 478 aa24.1■■□□□ 1.45
SMNDC1-201ENST00000369592 GPATCH4Q5T3I0 446 aaKnown RBP24.1■■□□□ 1.45
SMNDC1-201ENST00000369592 NECAB2Q7Z6G3 386 aa24.1■■□□□ 1.45
SMNDC1-201ENST00000369592 FAM133AQ8N9E0 248 aa24.1■■□□□ 1.45
SMNDC1-201ENST00000369592 SLC17A8Q8NDX2 589 aa24.1■■□□□ 1.45
SMNDC1-201ENST00000369592 CCDC136Q96JN2 1154 aa24.1■■□□□ 1.45
SMNDC1-201ENST00000369592 ACAD9Q9H845 621 aa24.1■■□□□ 1.45
SMNDC1-201ENST00000369592 RNF146Q9NTX7 359 aa24.1■■□□□ 1.45
SMNDC1-201ENST00000369592 RBM27Q9P2N5 1060 aaKnown RBP24.1■■□□□ 1.45
SMNDC1-201ENST00000369592 ISY1Q9ULR0 285 aaKnown RBP24.1■■□□□ 1.45
SMNDC1-201ENST00000369592 SYNGAP1Q96PV0 1343 aa24.1■■□□□ 1.45
SMNDC1-201ENST00000369592 E7EWF7 191 aa24.09■■□□□ 1.45
SMNDC1-201ENST00000369592 SNAI1O95863 264 aaPredicted RBP24.09■■□□□ 1.45
SMNDC1-201ENST00000369592 ZNF865P0CJ78 1059 aaPredicted RBP24.09■■□□□ 1.45
SMNDC1-201ENST00000369592 CCDC174Q6PII3 467 aa24.09■■□□□ 1.45
SMNDC1-201ENST00000369592 DDX11Q96FC9 970 aa24.09■■□□□ 1.45
SMNDC1-201ENST00000369592 HTATIP2Q9BUP3 242 aa24.09■■□□□ 1.45
SMNDC1-201ENST00000369592 A1CFQ9NQ94 594 aaKnown RBP24.09■■□□□ 1.45
SMNDC1-201ENST00000369592 PFASO15067 1338 aa24.09■■□□□ 1.45
SMNDC1-201ENST00000369592 TAL1P17542 331 aaPredicted RBP24.08■■□□□ 1.45
SMNDC1-201ENST00000369592 SLC4A3P48751 1232 aa24.08■■□□□ 1.45
SMNDC1-201ENST00000369592 MUM1L1Q5H9M0 696 aa24.08■■□□□ 1.45
SMNDC1-201ENST00000369592 TRERF1Q96PN7 1200 aa24.08■■□□□ 1.45
SMNDC1-201ENST00000369592 KAT14Q9H8E8 782 aa24.08■■□□□ 1.45
SMNDC1-201ENST00000369592 ANKRD35Q8N283 1001 aa24.07■■□□□ 1.44
SMNDC1-201ENST00000369592 UBAC1Q9BSL1 405 aa24.07■■□□□ 1.44
SMNDC1-201ENST00000369592 HOMER2Q9NSB8 354 aa24.07■■□□□ 1.44
SMNDC1-201ENST00000369592 ASTN1O14525 1302 aa24.07■■□□□ 1.44
SMNDC1-201ENST00000369592 GOLGA8HP0CJ92 632 aa24.06■■□□□ 1.44
SMNDC1-201ENST00000369592 ALAS1P13196 640 aa24.06■■□□□ 1.44
SMNDC1-201ENST00000369592 CNGA1P29973 690 aa24.06■■□□□ 1.44
SMNDC1-201ENST00000369592 ANTXR2P58335 489 aa24.06■■□□□ 1.44
SMNDC1-201ENST00000369592 CNTN2Q02246 1040 aa24.06■■□□□ 1.44
SMNDC1-201ENST00000369592 NECTIN1Q15223 517 aa24.06■■□□□ 1.44
SMNDC1-201ENST00000369592 MB21D2Q8IYB1 491 aaPredicted RBP24.06■■□□□ 1.44
SMNDC1-201ENST00000369592 C11orf49Q9H6J7 331 aa24.06■■□□□ 1.44
SMNDC1-201ENST00000369592 CCPG1Q9ULG6 757 aa24.06■■□□□ 1.44
SMNDC1-201ENST00000369592 WDR19Q8NEZ3 1342 aa24.06■■□□□ 1.44
SMNDC1-201ENST00000369592 RANBP2P49792 3224 aaKnown RBP24.05■■□□□ 1.44
SMNDC1-201ENST00000369592 SOWAHBA6NEL2 793 aa24.05■■□□□ 1.44
SMNDC1-201ENST00000369592 TRDNQ13061 729 aa24.05■■□□□ 1.44
SMNDC1-201ENST00000369592 ASPRV1Q53RT3 343 aa24.05■■□□□ 1.44
SMNDC1-201ENST00000369592 NCOA7Q8NI08 942 aa24.05■■□□□ 1.44
SMNDC1-201ENST00000369592 CLEC4DQ8WXI8 215 aa24.05■■□□□ 1.44
SMNDC1-201ENST00000369592 KATNBL1Q9H079 304 aa24.05■■□□□ 1.44
SMNDC1-201ENST00000369592 CPVLQ9H3G5 476 aa24.05■■□□□ 1.44
SMNDC1-201ENST00000369592 CYP39A1Q9NYL5 469 aa24.05■■□□□ 1.44
SMNDC1-201ENST00000369592 COL9A3Q14050 684 aaPredicted RBP24.04■■□□□ 1.44
SMNDC1-201ENST00000369592 IFIT1BQ5T764 474 aaKnown RBP24.04■■□□□ 1.44
SMNDC1-201ENST00000369592 IGDCC4Q8TDY8 1250 aa24.04■■□□□ 1.44
SMNDC1-201ENST00000369592 DPF3Q92784 378 aa24.04■■□□□ 1.44
SMNDC1-201ENST00000369592 UBA5Q9GZZ9 404 aa24.04■■□□□ 1.44
SMNDC1-201ENST00000369592 SENP2Q9HC62 589 aa24.04■■□□□ 1.44
SMNDC1-201ENST00000369592 PNMA2Q9UL42 364 aa24.04■■□□□ 1.44
SMNDC1-201ENST00000369592 MYH6P13533 1939 aa24.04■■□□□ 1.44
SMNDC1-201ENST00000369592 POTEB2H3BUK9 544 aa24.03■■□□□ 1.44
SMNDC1-201ENST00000369592 KIAA1211Q6ZU35 1233 aa24.03■■□□□ 1.44
SMNDC1-201ENST00000369592 LRRC37A2A6NM11 1700 aa24.03■■□□□ 1.44
SMNDC1-201ENST00000369592 DNM1LO00429 736 aa24.02■■□□□ 1.44
SMNDC1-201ENST00000369592 SLC27A2O14975 620 aa24.02■■□□□ 1.44
SMNDC1-201ENST00000369592 ADGRF4Q8IZF3 695 aa24.02■■□□□ 1.44
SMNDC1-201ENST00000369592 MORC4Q8TE76 937 aa24.02■■□□□ 1.44
SMNDC1-201ENST00000369592 MTA3Q9BTC8 594 aa24.02■■□□□ 1.44
SMNDC1-201ENST00000369592 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.02■■□□□ 1.44
SMNDC1-201ENST00000369592 DNAH12Q6ZR08 3092 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms