RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 MAST2Q6P0Q8 1798 aa10.34□□□□□ -0.75
TPM3-213ENST00000368545 EML1O00423 815 aa10.34□□□□□ -0.75
TPM3-213ENST00000368545 UBE3CQ15386 1083 aa10.34□□□□□ -0.75
TPM3-213ENST00000368545 PI16Q6UXB8 463 aa10.34□□□□□ -0.75
TPM3-213ENST00000368545 VPS37DQ86XT2 251 aa10.34□□□□□ -0.75
TPM3-213ENST00000368545 TM6SF1Q9BZW5 370 aa10.34□□□□□ -0.75
TPM3-213ENST00000368545 ARHGEF10LQ9HCE6 1279 aa10.34□□□□□ -0.75
TPM3-213ENST00000368545 LEMD3Q9Y2U8 911 aa10.34□□□□□ -0.75
TPM3-213ENST00000368545 DUOX1Q9NRD9 1551 aa10.34□□□□□ -0.75
TPM3-213ENST00000368545 SNAP23O00161 211 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 BBOX1O75936 387 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 CD2BP2O95400 341 aaKnown RBP10.33□□□□□ -0.76
TPM3-213ENST00000368545 ADD2P35612 726 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 GRM5P41594 1212 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 GMPSP49915 693 aaPredicted RBP10.33□□□□□ -0.76
TPM3-213ENST00000368545 NEK4P51957 841 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 PRMT2P55345 433 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 MAP3K12Q12852 859 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 CREB3L3Q68CJ9 461 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 HS2ST1Q7LGA3 356 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 KRT26Q7Z3Y9 468 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 ALDH16A1Q8IZ83 802 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 DENND2AQ9ULE3 1009 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 XDHP47989 1333 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 PPIP5K2O43314 1243 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 HSP90AA1P07900 732 aaKnown RBP10.33□□□□□ -0.76
TPM3-213ENST00000368545 FGRP09769 529 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 EIF4BP23588 611 aaKnown RBP10.33□□□□□ -0.76
TPM3-213ENST00000368545 PSMA5P28066 241 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 ADD1P35611 737 aaKnown RBP10.33□□□□□ -0.76
TPM3-213ENST00000368545 KRT32Q14532 448 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 C11orf91Q3C1V1 193 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 SEC62Q99442 399 aaKnown RBP10.33□□□□□ -0.76
TPM3-213ENST00000368545 OSBPL2Q9H1P3 480 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 IL21Q9HBE4 155 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 PTPN22Q9Y2R2 807 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 HCN4Q9Y3Q4 1203 aa10.33□□□□□ -0.76
TPM3-213ENST00000368545 RPAP1Q9BWH6 1393 aaPredicted RBP10.32□□□□□ -0.76
TPM3-213ENST00000368545 LAMA4Q16363 1823 aa10.32□□□□□ -0.76
TPM3-213ENST00000368545 A6NHS1 94 aa10.32□□□□□ -0.76
TPM3-213ENST00000368545 H0YGN5 161 aa10.32□□□□□ -0.76
TPM3-213ENST00000368545 SLC27A2O14975 620 aa10.32□□□□□ -0.76
TPM3-213ENST00000368545 IDH1O75874 414 aaKnown RBP10.32□□□□□ -0.76
TPM3-213ENST00000368545 IL2RAP01589 272 aa10.32□□□□□ -0.76
TPM3-213ENST00000368545 SLC9C2Q5TAH2 1124 aa10.32□□□□□ -0.76
TPM3-213ENST00000368545 OTUD7BQ6GQQ9 843 aa10.32□□□□□ -0.76
TPM3-213ENST00000368545 CCDC129Q6ZRS4 1044 aa10.32□□□□□ -0.76
TPM3-213ENST00000368545 OSBP2Q969R2 916 aa10.32□□□□□ -0.76
TPM3-213ENST00000368545 FRMD6Q96NE9 622 aa10.32□□□□□ -0.76
TPM3-213ENST00000368545 ZIC5Q96T25 663 aa10.32□□□□□ -0.76
TPM3-213ENST00000368545 PRO3102Q9H379 93 aa10.32□□□□□ -0.76
TPM3-213ENST00000368545 PIH1D3Q9NQM4 214 aaKnown RBP10.32□□□□□ -0.76
TPM3-213ENST00000368545 ANKIB1Q9P2G1 1089 aa10.32□□□□□ -0.76
TPM3-213ENST00000368545 GGT7Q9UJ14 662 aa10.32□□□□□ -0.76
TPM3-213ENST00000368545 SERTM1A2A2V5 107 aa10.31□□□□□ -0.76
TPM3-213ENST00000368545 CDK2AP1O14519 115 aa10.31□□□□□ -0.76
TPM3-213ENST00000368545 TRIM32Q13049 653 aa10.31□□□□□ -0.76
TPM3-213ENST00000368545 TMED8Q6PL24 325 aaPredicted RBP10.31□□□□□ -0.76
TPM3-213ENST00000368545 C15orf52Q6ZUT6 534 aaKnown RBP10.31□□□□□ -0.76
TPM3-213ENST00000368545 ZDHHC1Q8WTX9 485 aa10.31□□□□□ -0.76
TPM3-213ENST00000368545 IFT43Q96FT9 208 aa10.31□□□□□ -0.76
TPM3-213ENST00000368545 MANSC4A6NHS7 340 aaPredicted RBP10.31□□□□□ -0.76
TPM3-213ENST00000368545 M0R2C6 588 aa10.31□□□□□ -0.76
TPM3-213ENST00000368545 PPEF1O14829 653 aaPredicted RBP10.31□□□□□ -0.76
TPM3-213ENST00000368545 HSPD1P10809 573 aaKnown RBP10.31□□□□□ -0.76
TPM3-213ENST00000368545 PDE6AP16499 860 aa10.31□□□□□ -0.76
TPM3-213ENST00000368545 GYG1P46976 350 aa10.31□□□□□ -0.76
TPM3-213ENST00000368545 CXCL9Q07325 125 aa10.31□□□□□ -0.76
TPM3-213ENST00000368545 DHX9Q08211 1270 aaKnown RBP10.31□□□□□ -0.76
TPM3-213ENST00000368545 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.31□□□□□ -0.76
TPM3-213ENST00000368545 GPR152Q8TDT2 470 aa10.31□□□□□ -0.76
TPM3-213ENST00000368545 FAM84BQ96KN1 310 aaPredicted RBP10.31□□□□□ -0.76
TPM3-213ENST00000368545 SPACA7Q96KW9 195 aa10.31□□□□□ -0.76
TPM3-213ENST00000368545 SLKQ9H2G2 1235 aaPredicted RBP10.31□□□□□ -0.76
TPM3-213ENST00000368545 CNOT7Q9UIV1 285 aaKnown RBP10.31□□□□□ -0.76
TPM3-213ENST00000368545 CHGBP05060 677 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 CASTP20810 708 aaKnown RBP10.3□□□□□ -0.76
TPM3-213ENST00000368545 HIBADHP31937 336 aaKnown RBP10.3□□□□□ -0.76
TPM3-213ENST00000368545 NF2P35240 595 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 PLA2G5P39877 138 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 BMS1Q14692 1282 aaKnown RBP10.3□□□□□ -0.76
TPM3-213ENST00000368545 TLR1Q15399 786 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 JAZF1Q86VZ6 243 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 JAKMIP1Q96N16 626 aaKnown RBP10.3□□□□□ -0.76
TPM3-213ENST00000368545 CDK15Q96Q40 435 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 COL25A1Q9BXS0 654 aaPredicted RBP10.3□□□□□ -0.76
TPM3-213ENST00000368545 CTNNA3Q9UI47 895 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 CYP46A1Q9Y6A2 500 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 COL1A1P02452 1464 aaPredicted RBP10.3□□□□□ -0.76
TPM3-213ENST00000368545 ZNF532Q9HCE3 1301 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 IRS2Q9Y4H2 1338 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 TCRBV5S4A2TA0A5A2 114 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 GPAA1O43292 621 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 STK10O94804 968 aaKnown RBP10.3□□□□□ -0.76
TPM3-213ENST00000368545 HIRAP54198 1017 aaPredicted RBP10.3□□□□□ -0.76
TPM3-213ENST00000368545 TCEAL1Q15170 157 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 RTN1Q16799 776 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 MEI1Q5TIA1 1274 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 VPS53Q5VIR6 699 aa10.3□□□□□ -0.76
TPM3-213ENST00000368545 ZNF746Q6NUN9 644 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms