RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 TRPV6Q9H1D0 765 aa17.81■□□□□ 0.44
VAMP4-202ENST00000367740 SH2D4AQ9H788 454 aa17.81■□□□□ 0.44
VAMP4-202ENST00000367740 GPR108Q9NPR9 543 aa17.81■□□□□ 0.44
VAMP4-202ENST00000367740 PPP1R9AQ9ULJ8 1098 aa17.81■□□□□ 0.44
VAMP4-202ENST00000367740 ASTN1O14525 1302 aa17.8■□□□□ 0.44
VAMP4-202ENST00000367740 PNMA6EA0A0J9YXQ4 647 aa17.8■□□□□ 0.44
VAMP4-202ENST00000367740 SPRED2Q7Z698 418 aa17.8■□□□□ 0.44
VAMP4-202ENST00000367740 FAM178BQ8IXR5 827 aa17.8■□□□□ 0.44
VAMP4-202ENST00000367740 KCNH6Q9H252 994 aa17.8■□□□□ 0.44
VAMP4-202ENST00000367740 ABHD16BQ9H3Z7 469 aa17.8■□□□□ 0.44
VAMP4-202ENST00000367740 NOB1Q9ULX3 412 aaKnown RBP17.8■□□□□ 0.44
VAMP4-202ENST00000367740 GNAI3P08754 354 aa17.79■□□□□ 0.44
VAMP4-202ENST00000367740 AKR1B1P15121 316 aa17.79■□□□□ 0.44
VAMP4-202ENST00000367740 ITGA7Q13683 1181 aa17.79■□□□□ 0.44
VAMP4-202ENST00000367740 DDX11Q96FC9 970 aa17.79■□□□□ 0.44
VAMP4-202ENST00000367740 API5Q9BZZ5 524 aaKnown RBP17.79■□□□□ 0.44
VAMP4-202ENST00000367740 KATNBL1Q9H079 304 aa17.79■□□□□ 0.44
VAMP4-202ENST00000367740 BAZ2AQ9UIF9 1905 aaKnown RBP17.78■□□□□ 0.44
VAMP4-202ENST00000367740 PFKMP08237 780 aa17.78■□□□□ 0.44
VAMP4-202ENST00000367740 CSPP1Q1MSJ5 1256 aa17.78■□□□□ 0.44
VAMP4-202ENST00000367740 SLC9A7Q96T83 725 aa17.78■□□□□ 0.44
VAMP4-202ENST00000367740 TEX13BQ9BXU2 312 aa17.78■□□□□ 0.44
VAMP4-202ENST00000367740 MCM9Q9NXL9 1143 aa17.78■□□□□ 0.44
VAMP4-202ENST00000367740 RIPK3Q9Y572 518 aa17.78■□□□□ 0.44
VAMP4-202ENST00000367740 CACNA1AO00555 2505 aa17.78■□□□□ 0.44
VAMP4-202ENST00000367740 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.77■□□□□ 0.44
VAMP4-202ENST00000367740 CABYRO75952 493 aa17.77■□□□□ 0.44
VAMP4-202ENST00000367740 CYP2D6P10635 497 aa17.77■□□□□ 0.44
VAMP4-202ENST00000367740 ALADP13716 330 aa17.77■□□□□ 0.44
VAMP4-202ENST00000367740 SNRNP48Q6IEG0 339 aaKnown RBP17.77■□□□□ 0.44
VAMP4-202ENST00000367740 ARMCX2Q7L311 632 aa17.77■□□□□ 0.44
VAMP4-202ENST00000367740 UBE2ZQ9H832 354 aaPredicted RBP17.77■□□□□ 0.44
VAMP4-202ENST00000367740 TLR7Q9NYK1 1049 aaKnown RBP17.77■□□□□ 0.44
VAMP4-202ENST00000367740 DBNLQ9UJU6 430 aaKnown RBP17.77■□□□□ 0.44
VAMP4-202ENST00000367740 GREB1LQ9C091 1923 aaPredicted RBP17.76■□□□□ 0.43
VAMP4-202ENST00000367740 C5orf42Q9H799 3197 aa17.76■□□□□ 0.43
VAMP4-202ENST00000367740 E9PSI1 815 aa17.76■□□□□ 0.43
VAMP4-202ENST00000367740 SSTR3P32745 418 aaPredicted RBP17.76■□□□□ 0.43
VAMP4-202ENST00000367740 FAM83BQ5T0W9 1011 aa17.76■□□□□ 0.43
VAMP4-202ENST00000367740 DEFB128Q7Z7B8 93 aa17.76■□□□□ 0.43
VAMP4-202ENST00000367740 DYNLL2Q96FJ2 89 aa17.76■□□□□ 0.43
VAMP4-202ENST00000367740 ANTXR1Q9H6X2 564 aa17.76■□□□□ 0.43
VAMP4-202ENST00000367740 SWAP70Q9UH65 585 aa17.76■□□□□ 0.43
VAMP4-202ENST00000367740 SIP14410 1827 aa17.76■□□□□ 0.43
VAMP4-202ENST00000367740 IL9P15248 144 aa17.75■□□□□ 0.43
VAMP4-202ENST00000367740 PTGS1P23219 599 aa17.75■□□□□ 0.43
VAMP4-202ENST00000367740 PSMC6P62333 389 aa17.75■□□□□ 0.43
VAMP4-202ENST00000367740 HERC6Q8IVU3 1022 aa17.75■□□□□ 0.43
VAMP4-202ENST00000367740 CCDC144CPQ8IYA2 1237 aa17.75■□□□□ 0.43
VAMP4-202ENST00000367740 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.75■□□□□ 0.43
VAMP4-202ENST00000367740 PHOSPHO2Q8TCD6 241 aa17.75■□□□□ 0.43
VAMP4-202ENST00000367740 GDPD5Q8WTR4 605 aa17.75■□□□□ 0.43
VAMP4-202ENST00000367740 SEZ6LQ9BYH1 1024 aa17.75■□□□□ 0.43
VAMP4-202ENST00000367740 TET1Q8NFU7 2136 aa17.75■□□□□ 0.43
VAMP4-202ENST00000367740 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.74■□□□□ 0.43
VAMP4-202ENST00000367740 MAGEB6P1A0A0J9YX57 407 aa17.74■□□□□ 0.43
VAMP4-202ENST00000367740 EEF2P13639 858 aaKnown RBP17.74■□□□□ 0.43
VAMP4-202ENST00000367740 FSCN1Q16658 493 aaKnown RBP17.74■□□□□ 0.43
VAMP4-202ENST00000367740 LEXMQ3ZCV2 418 aa17.74■□□□□ 0.43
VAMP4-202ENST00000367740 TMED8Q6PL24 325 aaPredicted RBP17.74■□□□□ 0.43
VAMP4-202ENST00000367740 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.74■□□□□ 0.43
VAMP4-202ENST00000367740 TLK2Q86UE8 772 aa17.74■□□□□ 0.43
VAMP4-202ENST00000367740 SDR42E1Q8WUS8 393 aa17.74■□□□□ 0.43
VAMP4-202ENST00000367740 ANKS1AQ92625 1134 aa17.74■□□□□ 0.43
VAMP4-202ENST00000367740 PHOX2BQ99453 314 aa17.74■□□□□ 0.43
VAMP4-202ENST00000367740 CRNKL1Q9BZJ0 848 aaKnown RBP17.74■□□□□ 0.43
VAMP4-202ENST00000367740 DCP1AQ9NPI6 582 aaPredicted RBP17.74■□□□□ 0.43
VAMP4-202ENST00000367740 LMCD1Q9NZU5 365 aa17.74■□□□□ 0.43
VAMP4-202ENST00000367740 GNEQ9Y223 722 aaKnown RBP17.74■□□□□ 0.43
VAMP4-202ENST00000367740 ACTN1P12814 892 aa17.73■□□□□ 0.43
VAMP4-202ENST00000367740 TNFAIP2Q03169 654 aa17.73■□□□□ 0.43
VAMP4-202ENST00000367740 SLF1Q9BQI6 1058 aa17.73■□□□□ 0.43
VAMP4-202ENST00000367740 ALDH8A1Q9H2A2 487 aaPredicted RBP17.73■□□□□ 0.43
VAMP4-202ENST00000367740 LCHNA4D1U4 455 aa17.72■□□□□ 0.43
VAMP4-202ENST00000367740 DCXO43602 365 aa17.72■□□□□ 0.43
VAMP4-202ENST00000367740 CYP2C9P11712 490 aa17.72■□□□□ 0.43
VAMP4-202ENST00000367740 KCNA5P22460 613 aa17.72■□□□□ 0.43
VAMP4-202ENST00000367740 SLFN5Q08AF3 891 aa17.72■□□□□ 0.43
VAMP4-202ENST00000367740 GOPCQ9HD26 462 aa17.72■□□□□ 0.43
VAMP4-202ENST00000367740 TRMT13Q9NUP7 481 aaKnown RBP17.72■□□□□ 0.43
VAMP4-202ENST00000367740 ZNF536O15090 1300 aa17.72■□□□□ 0.43
VAMP4-202ENST00000367740 POTEB3A0JP26 581 aa17.71■□□□□ 0.43
VAMP4-202ENST00000367740 KIF28PB7ZC32 967 aa17.71■□□□□ 0.43
VAMP4-202ENST00000367740 ATP2A1O14983 1001 aa17.71■□□□□ 0.43
VAMP4-202ENST00000367740 RAD21O60216 631 aa17.71■□□□□ 0.43
VAMP4-202ENST00000367740 GNAI2P04899 355 aa17.71■□□□□ 0.43
VAMP4-202ENST00000367740 SLC4A3P48751 1232 aa17.71■□□□□ 0.43
VAMP4-202ENST00000367740 POTEBQ6S5H4 581 aa17.71■□□□□ 0.43
VAMP4-202ENST00000367740 NOL8Q76FK4 1167 aaKnown RBP17.71■□□□□ 0.43
VAMP4-202ENST00000367740 FAM9BQ8IZU0 186 aa17.71■□□□□ 0.43
VAMP4-202ENST00000367740 ANKRD35Q8N283 1001 aa17.71■□□□□ 0.43
VAMP4-202ENST00000367740 CCDC17Q96LX7 622 aa17.71■□□□□ 0.43
VAMP4-202ENST00000367740 NUP88Q99567 741 aaPredicted RBP17.71■□□□□ 0.43
VAMP4-202ENST00000367740 CCDC8Q9H0W5 538 aaPredicted RBP17.71■□□□□ 0.43
VAMP4-202ENST00000367740 MYO15AQ9UKN7 3530 aa17.7■□□□□ 0.42
VAMP4-202ENST00000367740 PTCRAQ6ISU1 281 aaPredicted RBP17.7■□□□□ 0.42
VAMP4-202ENST00000367740 HFE2Q6ZVN8 426 aa17.7■□□□□ 0.42
VAMP4-202ENST00000367740 LCTP09848 1927 aa17.7■□□□□ 0.42
VAMP4-202ENST00000367740 TNKSO95271 1327 aa17.7■□□□□ 0.42
VAMP4-202ENST00000367740 ZDBF2Q9HCK1 2354 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms