RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 SERPINB2P05120 415 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 MCF2P10911 925 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 IFT88Q13099 833 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 NLRX1Q86UT6 975 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 EPHB4P54760 987 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 MAP3K10Q02779 954 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 DMP1Q13316 513 aaPredicted RBP13.54□□□□□ -0.24
TPR-201ENST00000367478 NBPF9Q3BBW0 867 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 FOXO3O43524 673 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 MED10Q9BTT4 135 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 PCDHB15Q9Y5E8 787 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 CHEK2O96017 543 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 GLE1Q53GS7 698 aaKnown RBP13.54□□□□□ -0.24
TPR-201ENST00000367478 ITKQ08881 620 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 C16orf87Q6PH81 154 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 USP6NLQ92738 828 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 ZBTB9Q96C00 473 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 CHMP6Q96FZ7 201 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 IQSEC3Q9UPP2 1182 aaPredicted RBP13.54□□□□□ -0.24
TPR-201ENST00000367478 ZNF148Q9UQR1 794 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 GFAPP14136 432 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 DEPTORQ8TB45 409 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 POLKQ9UBT6 870 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 ADALQ6DHV7 355 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 CABP7Q86V35 215 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 BCL2L12Q9HB09 334 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 PARP3Q9Y6F1 533 aa13.54□□□□□ -0.24
TPR-201ENST00000367478 A0A087WUV0 522 aaPredicted RBP13.53□□□□□ -0.24
TPR-201ENST00000367478 MBD4O95243 580 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 C8orf34Q49A92 452 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 KRT26Q7Z3Y9 468 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 KIAA1468Q9P260 1216 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 RCN2Q14257 317 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 TSC22D3Q99576 134 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 GAS7O60861 476 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 MORC3Q14149 939 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 DZIP3Q86Y13 1208 aaKnown RBP13.53□□□□□ -0.24
TPR-201ENST00000367478 NUDCD3Q8IVD9 361 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 DIS3L2Q8IYB7 885 aaKnown RBP13.53□□□□□ -0.24
TPR-201ENST00000367478 CDV3Q9UKY7 258 aaKnown RBP13.53□□□□□ -0.24
TPR-201ENST00000367478 IRS4O14654 1257 aaPredicted RBP13.53□□□□□ -0.24
TPR-201ENST00000367478 ACTN1P12814 892 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 NPR1P16066 1061 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 ATP6V1E2Q96A05 226 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 SLC27A2O14975 620 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 DCTN3O75935 186 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 NSFL1CQ9UNZ2 370 aaKnown RBP13.53□□□□□ -0.24
TPR-201ENST00000367478 POLD1P28340 1107 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 ARHGAP44Q17R89 818 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 ALS2CLQ60I27 953 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 DONSONQ9NYP3 566 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 WDR7Q9Y4E6 1490 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 HDAC4P56524 1084 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 NBPF10Q6P3W6 841 aaKnown RBP13.53□□□□□ -0.24
TPR-201ENST00000367478 RETREG2Q8NC44 543 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 KLHL29Q96CT2 875 aa13.53□□□□□ -0.24
TPR-201ENST00000367478 MAPK13O15264 365 aa13.52□□□□□ -0.24
TPR-201ENST00000367478 TEDDM1Q5T9Z0 273 aa13.52□□□□□ -0.24
TPR-201ENST00000367478 PIP4K2CQ8TBX8 421 aa13.52□□□□□ -0.24
TPR-201ENST00000367478 FAM96AQ9H5X1 160 aa13.52□□□□□ -0.24
TPR-201ENST00000367478 ETF1P62495 437 aaKnown RBP13.52□□□□□ -0.24
TPR-201ENST00000367478 CNPY4Q8N129 248 aa13.52□□□□□ -0.24
TPR-201ENST00000367478 NBPF3Q9H094 633 aa13.52□□□□□ -0.24
TPR-201ENST00000367478 GTPBP10A4D1E9 387 aaKnown RBP13.52□□□□□ -0.24
TPR-201ENST00000367478 DYNC1I2Q13409 638 aaKnown RBP13.52□□□□□ -0.24
TPR-201ENST00000367478 V9GY48 417 aaPredicted RBP13.52□□□□□ -0.24
TPR-201ENST00000367478 SYCE1LA8MT33 242 aa13.52□□□□□ -0.24
TPR-201ENST00000367478 MCF2LO15068 1137 aa13.52□□□□□ -0.24
TPR-201ENST00000367478 XPOTO43592 962 aaKnown RBP13.52□□□□□ -0.24
TPR-201ENST00000367478 ZNF500O60304 480 aaPredicted RBP13.52□□□□□ -0.24
TPR-201ENST00000367478 RASGRF2O14827 1237 aa13.52□□□□□ -0.25
TPR-201ENST00000367478 RXRAP19793 462 aa13.52□□□□□ -0.25
TPR-201ENST00000367478 ABCB4P21439 1286 aa13.52□□□□□ -0.25
TPR-201ENST00000367478 MSH2P43246 934 aa13.52□□□□□ -0.25
TPR-201ENST00000367478 CCT5P48643 541 aa13.52□□□□□ -0.25
TPR-201ENST00000367478 TRIM55Q9BYV6 548 aa13.52□□□□□ -0.25
TPR-201ENST00000367478 PKD2L1Q9P0L9 805 aa13.52□□□□□ -0.25
TPR-201ENST00000367478 CC2D2AQ9P2K1 1620 aa13.52□□□□□ -0.25
TPR-201ENST00000367478 CPP00450 1065 aa13.52□□□□□ -0.25
TPR-201ENST00000367478 NEUROG2Q9H2A3 272 aa13.52□□□□□ -0.25
TPR-201ENST00000367478 TFCP2Q12800 502 aa13.52□□□□□ -0.25
TPR-201ENST00000367478 FLOT2Q14254 428 aa13.52□□□□□ -0.25
TPR-201ENST00000367478 TRIML2Q8N7C3 387 aa13.52□□□□□ -0.25
TPR-201ENST00000367478 STK17AQ9UEE5 414 aa13.52□□□□□ -0.25
TPR-201ENST00000367478 TLK1Q9UKI8 766 aa13.52□□□□□ -0.25
TPR-201ENST00000367478 RPRD2Q5VT52 1461 aaKnown RBP13.51□□□□□ -0.25
TPR-201ENST00000367478 MYCLP12524 364 aaPredicted RBP13.51□□□□□ -0.25
TPR-201ENST00000367478 YWHAGP61981 247 aaKnown RBP eCLIP13.51□□□□□ -0.25
TPR-201ENST00000367478 TRAIPQ9BWF2 469 aa13.51□□□□□ -0.25
TPR-201ENST00000367478 XPO4Q9C0E2 1151 aaKnown RBP13.51□□□□□ -0.25
TPR-201ENST00000367478 B4E1Z4 1266 aa13.51□□□□□ -0.25
TPR-201ENST00000367478 LIG4P49917 911 aa13.51□□□□□ -0.25
TPR-201ENST00000367478 HP1BP3Q5SSJ5 553 aaPredicted RBP13.51□□□□□ -0.25
TPR-201ENST00000367478 OR9Q1Q8NGQ5 310 aa13.51□□□□□ -0.25
TPR-201ENST00000367478 BABAM1Q9NWV8 329 aa13.51□□□□□ -0.25
TPR-201ENST00000367478 GINS2Q9Y248 185 aa13.51□□□□□ -0.25
TPR-201ENST00000367478 SGK1O00141 431 aa13.51□□□□□ -0.25
TPR-201ENST00000367478 RPSAP08865 295 aaKnown RBP13.51□□□□□ -0.25
TPR-201ENST00000367478 SPOUT1Q5T280 376 aaKnown RBP13.51□□□□□ -0.25
TPR-201ENST00000367478 RRP15Q9Y3B9 282 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms