RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 FERMT2Q96AC1 680 aa11.83□□□□□ -0.52
NUP43-203ENST00000367404 KIF1BPQ96EK5 621 aa11.83□□□□□ -0.52
NUP43-203ENST00000367404 DNAJC2Q99543 621 aaKnown RBP11.83□□□□□ -0.52
NUP43-203ENST00000367404 ARMT1Q9H993 441 aa11.83□□□□□ -0.52
NUP43-203ENST00000367404 XPNPEP3Q9NQH7 507 aa11.83□□□□□ -0.52
NUP43-203ENST00000367404 ZNF214Q9UL59 606 aaPredicted RBP11.83□□□□□ -0.52
NUP43-203ENST00000367404 A0A1W2PQ45 241 aaPredicted RBP11.82□□□□□ -0.52
NUP43-203ENST00000367404 A0A1W2PQY0 241 aa11.82□□□□□ -0.52
NUP43-203ENST00000367404 C3orf80F5H4A9 247 aa11.82□□□□□ -0.52
NUP43-203ENST00000367404 SMIM22K7EJ46 135 aa11.82□□□□□ -0.52
NUP43-203ENST00000367404 KIAA0355O15063 1070 aa11.82□□□□□ -0.52
NUP43-203ENST00000367404 PRKAB2O43741 272 aa11.82□□□□□ -0.52
NUP43-203ENST00000367404 ADAMTS4O75173 837 aa11.82□□□□□ -0.52
NUP43-203ENST00000367404 MBD4O95243 580 aa11.82□□□□□ -0.52
NUP43-203ENST00000367404 CLTBP09497 229 aa11.82□□□□□ -0.52
NUP43-203ENST00000367404 ZNF865P0CJ78 1059 aaPredicted RBP11.82□□□□□ -0.52
NUP43-203ENST00000367404 RARBP10826 455 aa11.82□□□□□ -0.52
NUP43-203ENST00000367404 COPB2P35606 906 aa11.82□□□□□ -0.52
NUP43-203ENST00000367404 MLLT3P42568 568 aaPredicted RBP11.82□□□□□ -0.52
NUP43-203ENST00000367404 PLCB2Q00722 1185 aa11.82□□□□□ -0.52
NUP43-203ENST00000367404 RNF180Q86T96 592 aa11.82□□□□□ -0.52
NUP43-203ENST00000367404 CLASRPQ8N2M8 674 aaKnown RBP11.82□□□□□ -0.52
NUP43-203ENST00000367404 MMP19Q99542 508 aa11.82□□□□□ -0.52
NUP43-203ENST00000367404 TINF2Q9BSI4 451 aa11.82□□□□□ -0.52
NUP43-203ENST00000367404 FBXO28Q9NVF7 368 aa11.82□□□□□ -0.52
NUP43-203ENST00000367404 PPP1R9AQ9ULJ8 1098 aa11.82□□□□□ -0.52
NUP43-203ENST00000367404 TACC3Q9Y6A5 838 aa11.82□□□□□ -0.52
NUP43-203ENST00000367404 CYP2D7A0A087X1C5 515 aa11.81□□□□□ -0.52
NUP43-203ENST00000367404 SMAPO00193 183 aa11.81□□□□□ -0.52
NUP43-203ENST00000367404 VWA5AO00534 786 aa11.81□□□□□ -0.52
NUP43-203ENST00000367404 EEF2P13639 858 aaKnown RBP11.81□□□□□ -0.52
NUP43-203ENST00000367404 AKR1A1P14550 325 aa11.81□□□□□ -0.52
NUP43-203ENST00000367404 TAL1P17542 331 aaPredicted RBP11.81□□□□□ -0.52
NUP43-203ENST00000367404 CDK8P49336 464 aa11.81□□□□□ -0.52
NUP43-203ENST00000367404 EPHB4P54760 987 aa11.81□□□□□ -0.52
NUP43-203ENST00000367404 SLFNL1Q499Z3 407 aa11.81□□□□□ -0.52
NUP43-203ENST00000367404 ANKRD33Q7Z3H0 272 aa11.81□□□□□ -0.52
NUP43-203ENST00000367404 PANK1Q8TE04 598 aa11.81□□□□□ -0.52
NUP43-203ENST00000367404 MYLIPQ8WY64 445 aa11.81□□□□□ -0.52
NUP43-203ENST00000367404 PAG1Q9NWQ8 432 aa11.81□□□□□ -0.52
NUP43-203ENST00000367404 PARP14Q460N5 1801 aa11.81□□□□□ -0.52
NUP43-203ENST00000367404 MUC3AQ02505 3323 aa11.81□□□□□ -0.52
NUP43-203ENST00000367404 PGK1P00558 417 aa11.8□□□□□ -0.52
NUP43-203ENST00000367404 PGK2P07205 417 aa11.8□□□□□ -0.52
NUP43-203ENST00000367404 IFIT2P09913 472 aaKnown RBP11.8□□□□□ -0.52
NUP43-203ENST00000367404 ATP5JP18859 108 aa11.8□□□□□ -0.52
NUP43-203ENST00000367404 STAT3P40763 770 aa11.8□□□□□ -0.52
NUP43-203ENST00000367404 KCTD2Q14681 263 aa11.8□□□□□ -0.52
NUP43-203ENST00000367404 UBE3CQ15386 1083 aa11.8□□□□□ -0.52
NUP43-203ENST00000367404 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.8□□□□□ -0.52
NUP43-203ENST00000367404 SIRT2Q8IXJ6 389 aa11.8□□□□□ -0.52
NUP43-203ENST00000367404 MSL3Q8N5Y2 521 aaKnown RBP11.8□□□□□ -0.52
NUP43-203ENST00000367404 RNPC3Q96LT9 517 aaKnown RBP11.8□□□□□ -0.52
NUP43-203ENST00000367404 TOX2Q96NM4 488 aa11.8□□□□□ -0.52
NUP43-203ENST00000367404 TSEN34Q9BSV6 310 aaKnown RBP11.8□□□□□ -0.52
NUP43-203ENST00000367404 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.8□□□□□ -0.52
NUP43-203ENST00000367404 KANSL2Q9H9L4 492 aa11.8□□□□□ -0.52
NUP43-203ENST00000367404 NPDC1Q9NQX5 325 aaPredicted RBP11.8□□□□□ -0.52
NUP43-203ENST00000367404 USP17L12C9JPN9 530 aa11.79□□□□□ -0.52
NUP43-203ENST00000367404 USP17L21D6R901 530 aa11.79□□□□□ -0.52
NUP43-203ENST00000367404 RAB11FIP3O75154 756 aa11.79□□□□□ -0.52
NUP43-203ENST00000367404 CHGBP05060 677 aa11.79□□□□□ -0.52
NUP43-203ENST00000367404 FOSL2P15408 326 aa11.79□□□□□ -0.52
NUP43-203ENST00000367404 CCSAPQ6IQ19 270 aaPredicted RBP11.79□□□□□ -0.52
NUP43-203ENST00000367404 RPAP2Q8IXW5 612 aaPredicted RBP11.79□□□□□ -0.52
NUP43-203ENST00000367404 KLHDC9Q8NEP7 349 aa11.79□□□□□ -0.52
NUP43-203ENST00000367404 LENG1Q96BZ8 264 aaPredicted RBP11.79□□□□□ -0.52
NUP43-203ENST00000367404 HAUS7Q99871 368 aa11.79□□□□□ -0.52
NUP43-203ENST00000367404 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.79□□□□□ -0.525e-7■■□□□ 12.6
NUP43-203ENST00000367404 GOPCQ9HD26 462 aa11.79□□□□□ -0.52
NUP43-203ENST00000367404 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.79□□□□□ -0.52
NUP43-203ENST00000367404 SYNGAP1Q96PV0 1343 aa11.79□□□□□ -0.52
NUP43-203ENST00000367404 SYNRGQ9UMZ2 1314 aa11.79□□□□□ -0.52
NUP43-203ENST00000367404 DNAJC25-GNG10A0A024R161 153 aa11.78□□□□□ -0.52
NUP43-203ENST00000367404 MOXD2PA6NHM9 499 aa11.78□□□□□ -0.52
NUP43-203ENST00000367404 ATP2A1O14983 1001 aa11.78□□□□□ -0.52
NUP43-203ENST00000367404 PQBP1O60828 265 aaKnown RBP11.78□□□□□ -0.52
NUP43-203ENST00000367404 HMMRO75330 724 aa11.78□□□□□ -0.52
NUP43-203ENST00000367404 RAG1P15918 1043 aa11.78□□□□□ -0.52
NUP43-203ENST00000367404 CST5P28325 142 aaPredicted RBP11.78□□□□□ -0.52
NUP43-203ENST00000367404 ACLYP53396 1101 aa11.78□□□□□ -0.52
NUP43-203ENST00000367404 FPGSQ05932 587 aa11.78□□□□□ -0.52
NUP43-203ENST00000367404 FAAP100Q0VG06 881 aa11.78□□□□□ -0.52
NUP43-203ENST00000367404 FAM83BQ5T0W9 1011 aa11.78□□□□□ -0.52
NUP43-203ENST00000367404 CTR9Q6PD62 1173 aa11.78□□□□□ -0.52
NUP43-203ENST00000367404 MAMDC4Q6UXC1 1216 aa11.78□□□□□ -0.52
NUP43-203ENST00000367404 AMOTL1Q8IY63 956 aa11.78□□□□□ -0.52
NUP43-203ENST00000367404 TATDN2Q93075 761 aa11.78□□□□□ -0.52
NUP43-203ENST00000367404 TEX13BQ9BXU2 312 aa11.78□□□□□ -0.52
NUP43-203ENST00000367404 BOLA2Q9H3K6 86 aa11.78□□□□□ -0.52
NUP43-203ENST00000367404 ZBTB40Q9NUA8 1239 aa11.78□□□□□ -0.52
NUP43-203ENST00000367404 ARPP21Q9UBL0 812 aaPredicted RBP11.78□□□□□ -0.52
NUP43-203ENST00000367404 TBX21Q9UL17 535 aa11.78□□□□□ -0.52
NUP43-203ENST00000367404 CNPY2Q9Y2B0 182 aa11.78□□□□□ -0.52
NUP43-203ENST00000367404 GREB1LQ9C091 1923 aaPredicted RBP11.78□□□□□ -0.52
NUP43-203ENST00000367404 APBB1O00213 710 aa11.77□□□□□ -0.53
NUP43-203ENST00000367404 SNAI1O95863 264 aaPredicted RBP11.77□□□□□ -0.53
NUP43-203ENST00000367404 DNAJB2P25686 324 aa11.77□□□□□ -0.53
NUP43-203ENST00000367404 HNRNPUQ00839 825 aaKnown RBP eCLIP11.77□□□□□ -0.53
NUP43-203ENST00000367404 SBK1Q52WX2 424 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms