RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 PCDHA4Q9UN74 947 aa18.25■□□□□ 0.51
SCAF8-201ENST00000367178 USTQ9Y2C2 406 aa18.25■□□□□ 0.51
SCAF8-201ENST00000367178 PCDHA5Q9Y5H7 936 aa18.25■□□□□ 0.51
SCAF8-201ENST00000367178 RPS6KA1Q15418 735 aa18.25■□□□□ 0.51
SCAF8-201ENST00000367178 IFNAR1P17181 557 aa18.25■□□□□ 0.51
SCAF8-201ENST00000367178 MXRA7P84157 204 aa18.25■□□□□ 0.51
SCAF8-201ENST00000367178 PEX26Q7Z412 305 aa18.25■□□□□ 0.51
SCAF8-201ENST00000367178 CPLX4Q7Z7G2 160 aa18.25■□□□□ 0.51
SCAF8-201ENST00000367178 SYCE1Q8N0S2 351 aa18.25■□□□□ 0.51
SCAF8-201ENST00000367178 POLR3EQ9NVU0 708 aa18.25■□□□□ 0.51
SCAF8-201ENST00000367178 K7ENM7 598 aa18.25■□□□□ 0.51
SCAF8-201ENST00000367178 SPATA1Q5VX52 437 aa18.25■□□□□ 0.51
SCAF8-201ENST00000367178 NCAPG2Q86XI2 1143 aa18.25■□□□□ 0.51
SCAF8-201ENST00000367178 ZBTB8OSQ8IWT0 167 aa18.25■□□□□ 0.51
SCAF8-201ENST00000367178 DHX36Q9H2U1 1008 aaKnown RBP18.25■□□□□ 0.51
SCAF8-201ENST00000367178 PRPF6O94906 941 aaKnown RBP18.24■□□□□ 0.51
SCAF8-201ENST00000367178 GDF11O95390 407 aa18.24■□□□□ 0.51
SCAF8-201ENST00000367178 MECOMQ03112 1051 aa18.24■□□□□ 0.51
SCAF8-201ENST00000367178 KCTD1Q719H9 257 aa18.24■□□□□ 0.51
SCAF8-201ENST00000367178 E7EVH7 732 aa18.24■□□□□ 0.51
SCAF8-201ENST00000367178 PPP6R2O75170 966 aa18.24■□□□□ 0.51
SCAF8-201ENST00000367178 RAD17O75943 681 aa18.24■□□□□ 0.51
SCAF8-201ENST00000367178 MRPS9P82933 396 aaKnown RBP18.24■□□□□ 0.51
SCAF8-201ENST00000367178 SPC25Q9HBM1 224 aa18.24■□□□□ 0.51
SCAF8-201ENST00000367178 UTP11Q9Y3A2 253 aaKnown RBP18.24■□□□□ 0.51
SCAF8-201ENST00000367178 CYP2D7A0A087X1C5 515 aa18.24■□□□□ 0.51
SCAF8-201ENST00000367178 LAD1O00515 517 aa18.24■□□□□ 0.51
SCAF8-201ENST00000367178 MMP10P09238 476 aa18.24■□□□□ 0.51
SCAF8-201ENST00000367178 LIG4P49917 911 aa18.24■□□□□ 0.51
SCAF8-201ENST00000367178 TRIM31Q9BZY9 425 aa18.24■□□□□ 0.51
SCAF8-201ENST00000367178 TSKSQ9UJT2 592 aa18.24■□□□□ 0.51
SCAF8-201ENST00000367178 NPR1P16066 1061 aa18.24■□□□□ 0.51
SCAF8-201ENST00000367178 U2AF2P26368 475 aaKnown RBP eCLIP18.24■□□□□ 0.519e-7■■■■□ 23.2
SCAF8-201ENST00000367178 KIF23Q02241 960 aaPredicted RBP18.24■□□□□ 0.51
SCAF8-201ENST00000367178 FAM76AQ8TAV0 307 aa18.24■□□□□ 0.51
SCAF8-201ENST00000367178 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.24■□□□□ 0.51
SCAF8-201ENST00000367178 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.24■□□□□ 0.51
SCAF8-201ENST00000367178 DAPK3O43293 454 aa18.23■□□□□ 0.51
SCAF8-201ENST00000367178 SORBS3O60504 671 aa18.23■□□□□ 0.51
SCAF8-201ENST00000367178 CCDC93Q567U6 631 aa18.23■□□□□ 0.51
SCAF8-201ENST00000367178 NBPF11Q86T75 865 aa18.23■□□□□ 0.51
SCAF8-201ENST00000367178 MYO1AQ9UBC5 1043 aa18.23■□□□□ 0.51
SCAF8-201ENST00000367178 MCAMP43121 646 aa18.23■□□□□ 0.51
SCAF8-201ENST00000367178 NECTIN1Q15223 517 aa18.23■□□□□ 0.51
SCAF8-201ENST00000367178 DYNLL2Q96FJ2 89 aa18.23■□□□□ 0.51
SCAF8-201ENST00000367178 MAGEF1Q9HAY2 307 aa18.23■□□□□ 0.51
SCAF8-201ENST00000367178 KIAA1024Q9UPX6 916 aa18.23■□□□□ 0.51
SCAF8-201ENST00000367178 LIFRP42702 1097 aa18.23■□□□□ 0.51
SCAF8-201ENST00000367178 IFT20Q8IY31 132 aa18.23■□□□□ 0.51
SCAF8-201ENST00000367178 ALKQ9UM73 1620 aa18.23■□□□□ 0.51
SCAF8-201ENST00000367178 H0YCG3 227 aa18.23■□□□□ 0.51
SCAF8-201ENST00000367178 NDC80O14777 642 aa18.23■□□□□ 0.51
SCAF8-201ENST00000367178 SLC16A2P36021 539 aa18.23■□□□□ 0.51
SCAF8-201ENST00000367178 SUGCTQ9HAC7 445 aa18.23■□□□□ 0.51
SCAF8-201ENST00000367178 ASIC3Q9UHC3 531 aa18.23■□□□□ 0.51
SCAF8-201ENST00000367178 RNF17Q9BXT8 1623 aaKnown RBP18.23■□□□□ 0.51
SCAF8-201ENST00000367178 DAAM2Q86T65 1068 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 KLHL7Q8IXQ5 586 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 GSDMAQ96QA5 445 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 METTL14Q9HCE5 456 aaKnown RBP18.22■□□□□ 0.51
SCAF8-201ENST00000367178 RABGAP1Q9Y3P9 1069 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 CFAP221Q4G0U5 840 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 CEP128Q6ZU80 1094 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 HACE1Q8IYU2 909 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 PIGSQ96S52 555 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 PI4KBQ9UBF8 816 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 EBAG9O00559 213 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 ADAM9Q13443 819 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 LRCH2Q5VUJ6 765 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 GBP6Q6ZN66 633 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 U2AF1L4Q8WU68 220 aaKnown RBP18.22■□□□□ 0.51
SCAF8-201ENST00000367178 COA1Q9GZY4 146 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 GAS8O95995 478 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 BMP3P12645 472 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 P4HA1P13674 534 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 YWHAEP62258 255 aaKnown RBP18.22■□□□□ 0.51
SCAF8-201ENST00000367178 CUEDC2Q9H467 287 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 NKIRAS1Q9NYS0 192 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 NARFQ9UHQ1 456 aa18.22■□□□□ 0.51
SCAF8-201ENST00000367178 NR5A1Q13285 461 aa18.21■□□□□ 0.51
SCAF8-201ENST00000367178 UAP1Q16222 522 aaPredicted RBP18.21■□□□□ 0.51
SCAF8-201ENST00000367178 MRFAP1L1Q96HT8 127 aa18.21■□□□□ 0.51
SCAF8-201ENST00000367178 STRBPQ96SI9 672 aaKnown RBP18.21■□□□□ 0.51
SCAF8-201ENST00000367178 BEGAINQ9BUH8 593 aa18.21■□□□□ 0.51
SCAF8-201ENST00000367178 GLI2P10070 1586 aa18.21■□□□□ 0.51
SCAF8-201ENST00000367178 MMP1P03956 469 aa18.21■□□□□ 0.51
SCAF8-201ENST00000367178 GCFC2P16383 781 aaKnown RBP18.21■□□□□ 0.51
SCAF8-201ENST00000367178 RASA3Q14644 834 aa18.21■□□□□ 0.51
SCAF8-201ENST00000367178 ARMCX5Q6P1M9 558 aa18.21■□□□□ 0.51
SCAF8-201ENST00000367178 USP17L2Q6R6M4 530 aa18.21■□□□□ 0.51
SCAF8-201ENST00000367178 AK8Q96MA6 479 aa18.21■□□□□ 0.51
SCAF8-201ENST00000367178 RRAGDQ9NQL2 400 aaPredicted RBP18.21■□□□□ 0.51
SCAF8-201ENST00000367178 FAM47CQ5HY64 1035 aa18.2■□□□□ 0.5
SCAF8-201ENST00000367178 TBCKQ8TEA7 893 aa18.2■□□□□ 0.5
SCAF8-201ENST00000367178 LARP4BQ92615 738 aaKnown RBP18.2■□□□□ 0.5
SCAF8-201ENST00000367178 GJA10Q969M2 543 aa18.2■□□□□ 0.5
SCAF8-201ENST00000367178 N4BP1O75113 896 aaKnown RBP18.2■□□□□ 0.5
SCAF8-201ENST00000367178 ELF2Q15723 593 aa18.2■□□□□ 0.5
SCAF8-201ENST00000367178 hCG_1984214I3L0E3 225 aa18.2■□□□□ 0.5
SCAF8-201ENST00000367178 ODR4Q5SWX8 454 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms