RNA–Protein interactions for RNA: ENST00000366790.3

PARP1-201, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2 BASIC

Gene PARP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-201ENST00000366790 MOXD2PA6NHM9 499 aa12.3□□□□□ -0.44
PARP1-201ENST00000366790 RANBP6O60518 1105 aaKnown RBP12.3□□□□□ -0.44
PARP1-201ENST00000366790 PGK1P00558 417 aa12.3□□□□□ -0.44
PARP1-201ENST00000366790 HSPD1P10809 573 aaKnown RBP12.3□□□□□ -0.44
PARP1-201ENST00000366790 CST5P28325 142 aaPredicted RBP12.3□□□□□ -0.44
PARP1-201ENST00000366790 NT5C2P49902 561 aa12.3□□□□□ -0.44
PARP1-201ENST00000366790 NKX3-2P78367 333 aa12.3□□□□□ -0.44
PARP1-201ENST00000366790 ACVR2BQ13705 512 aa12.3□□□□□ -0.44
PARP1-201ENST00000366790 TRIM60Q495X7 471 aa12.3□□□□□ -0.44
PARP1-201ENST00000366790 CCSAPQ6IQ19 270 aaPredicted RBP12.3□□□□□ -0.44
PARP1-201ENST00000366790 BTNL9Q6UXG8 535 aa12.3□□□□□ -0.44
PARP1-201ENST00000366790 FAM133AQ8N9E0 248 aa12.3□□□□□ -0.44
PARP1-201ENST00000366790 DCAF4Q8WV16 495 aa12.3□□□□□ -0.44
PARP1-201ENST00000366790 INCENPQ9NQS7 918 aa12.3□□□□□ -0.44
PARP1-201ENST00000366790 PDLIM7Q9NR12 457 aa12.3□□□□□ -0.44
PARP1-201ENST00000366790 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.3□□□□□ -0.44
PARP1-201ENST00000366790 CCDC171Q6TFL3 1326 aa12.3□□□□□ -0.44
PARP1-201ENST00000366790 SYNRGQ9UMZ2 1314 aa12.3□□□□□ -0.44
PARP1-201ENST00000366790 A0A1W2PQ45 241 aaPredicted RBP12.29□□□□□ -0.44
PARP1-201ENST00000366790 A0A1W2PQY0 241 aa12.29□□□□□ -0.44
PARP1-201ENST00000366790 NMT2O60551 498 aa12.29□□□□□ -0.44
PARP1-201ENST00000366790 MFAP1P55081 439 aaKnown RBP12.29□□□□□ -0.44
PARP1-201ENST00000366790 NUCB1Q02818 461 aa12.29□□□□□ -0.44
PARP1-201ENST00000366790 NMIQ13287 307 aaPredicted RBP12.29□□□□□ -0.44
PARP1-201ENST00000366790 ARMCX2Q7L311 632 aa12.29□□□□□ -0.44
PARP1-201ENST00000366790 ZNF589Q86UQ0 364 aaPredicted RBP12.29□□□□□ -0.44
PARP1-201ENST00000366790 CHD1LQ86WJ1 897 aa12.29□□□□□ -0.44
PARP1-201ENST00000366790 PLEKHM2Q8IWE5 1019 aa12.29□□□□□ -0.44
PARP1-201ENST00000366790 FERMT2Q96AC1 680 aa12.29□□□□□ -0.44
PARP1-201ENST00000366790 KATNBL1Q9H079 304 aa12.29□□□□□ -0.44
PARP1-201ENST00000366790 UPF3AQ9H1J1 476 aaKnown RBP12.29□□□□□ -0.44
PARP1-201ENST00000366790 A1CFQ9NQ94 594 aaKnown RBP12.29□□□□□ -0.44
PARP1-201ENST00000366790 RNF146Q9NTX7 359 aa12.29□□□□□ -0.44
PARP1-201ENST00000366790 ZHX1Q9UKY1 873 aaPredicted RBP12.29□□□□□ -0.44
PARP1-201ENST00000366790 PRR12Q9ULL5 1215 aa12.29□□□□□ -0.44
PARP1-201ENST00000366790 LAMA4Q16363 1823 aa12.28□□□□□ -0.44
PARP1-201ENST00000366790 TRIM6-TRIM34B2RNG4 842 aa12.28□□□□□ -0.44
PARP1-201ENST00000366790 POTEB2H3BUK9 544 aa12.28□□□□□ -0.44
PARP1-201ENST00000366790 KIAA0355O15063 1070 aa12.28□□□□□ -0.44
PARP1-201ENST00000366790 MYCNP04198 464 aaPredicted RBP12.28□□□□□ -0.44
PARP1-201ENST00000366790 TOP1P11387 765 aaKnown RBP12.28□□□□□ -0.44
PARP1-201ENST00000366790 SLC4A3P48751 1232 aa12.28□□□□□ -0.44
PARP1-201ENST00000366790 ACLYP53396 1101 aa12.28□□□□□ -0.44
PARP1-201ENST00000366790 GJA9P57773 515 aa12.28□□□□□ -0.44
PARP1-201ENST00000366790 TLE2Q04725 743 aa12.28□□□□□ -0.44
PARP1-201ENST00000366790 IKQ13123 557 aaPredicted RBP12.28□□□□□ -0.44
PARP1-201ENST00000366790 FAM109BQ6ICB4 259 aaPredicted RBP12.28□□□□□ -0.44
PARP1-201ENST00000366790 KCTD1Q719H9 257 aa12.28□□□□□ -0.44
PARP1-201ENST00000366790 ANKRD33Q7Z3H0 272 aa12.28□□□□□ -0.44
PARP1-201ENST00000366790 NUP133Q8WUM0 1156 aa12.28□□□□□ -0.44
PARP1-201ENST00000366790 AGBL1Q96MI9 1066 aa12.28□□□□□ -0.44
PARP1-201ENST00000366790 TTC14Q96N46 770 aa12.28□□□□□ -0.44
PARP1-201ENST00000366790 TOX2Q96NM4 488 aa12.28□□□□□ -0.44
PARP1-201ENST00000366790 RANBP17Q9H2T7 1088 aaKnown RBP12.28□□□□□ -0.44
PARP1-201ENST00000366790 ELP1O95163 1332 aa12.28□□□□□ -0.44
PARP1-201ENST00000366790 LCTP09848 1927 aa12.27□□□□□ -0.44
PARP1-201ENST00000366790 TRIM43BA6NCK2 446 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 SOWAHBA6NEL2 793 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 ASB14A6NK59 587 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 IGHDP01880 384 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 ICAM1P05362 532 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 CLTBP09497 229 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 SDSP20132 328 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 CNTN2Q02246 1040 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 CCDC144BQ3MJ40 725 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 AKNAD1Q5T1N1 836 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 CCDC144CPQ8IYA2 1237 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 DEFB123Q8N688 67 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 PCSK9Q8NBP7 692 aaKnown RBP12.27□□□□□ -0.45
PARP1-201ENST00000366790 TRIM43Q96BQ3 446 aaPredicted RBP12.27□□□□□ -0.45
PARP1-201ENST00000366790 LENG1Q96BZ8 264 aaPredicted RBP12.27□□□□□ -0.45
PARP1-201ENST00000366790 TRERF1Q96PN7 1200 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 TMEM47Q9BQJ4 181 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 RNF41Q9H4P4 317 aaPredicted RBP12.27□□□□□ -0.45
PARP1-201ENST00000366790 SPC25Q9HBM1 224 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 HOMER2Q9NSB8 354 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 PNMA2Q9UL42 364 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 ISY1Q9ULR0 285 aaKnown RBP12.27□□□□□ -0.45
PARP1-201ENST00000366790 LRRC37A2A6NM11 1700 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 CUL9Q8IWT3 2517 aa12.27□□□□□ -0.45
PARP1-201ENST00000366790 A0A0C4DFX4 3053 aa12.26□□□□□ -0.45
PARP1-201ENST00000366790 LOC102724159A0A0B4J2E5 919 aa12.26□□□□□ -0.45
PARP1-201ENST00000366790 HIP1O00291 1037 aa12.26□□□□□ -0.45
PARP1-201ENST00000366790 ADCY6O43306 1168 aa12.26□□□□□ -0.45
PARP1-201ENST00000366790 SNHG28P0DPA3 235 aa12.26□□□□□ -0.45
PARP1-201ENST00000366790 ALAS1P13196 640 aa12.26□□□□□ -0.45
PARP1-201ENST00000366790 PWP2Q15269 919 aaKnown RBP12.26□□□□□ -0.45
PARP1-201ENST00000366790 KCNA10Q16322 511 aa12.26□□□□□ -0.45
PARP1-201ENST00000366790 RRP12Q5JTH9 1297 aaKnown RBP12.26□□□□□ -0.45
PARP1-201ENST00000366790 SYDE2Q5VT97 1194 aa12.26□□□□□ -0.45
PARP1-201ENST00000366790 B4GALNT3Q6L9W6 998 aa12.26□□□□□ -0.45
PARP1-201ENST00000366790 MFSD6Q6ZSS7 791 aa12.26□□□□□ -0.45
PARP1-201ENST00000366790 RASGRP2Q7LDG7 609 aa12.26□□□□□ -0.45
PARP1-201ENST00000366790 SH3RF1Q7Z6J0 888 aa12.26□□□□□ -0.45
PARP1-201ENST00000366790 EXOC6Q8TAG9 804 aa12.26□□□□□ -0.45
PARP1-201ENST00000366790 MORC4Q8TE76 937 aa12.26□□□□□ -0.45
PARP1-201ENST00000366790 BADQ92934 168 aa12.26□□□□□ -0.45
PARP1-201ENST00000366790 RILPL2Q969X0 211 aa12.26□□□□□ -0.45
PARP1-201ENST00000366790 PRDM5Q9NQX1 630 aaPredicted RBP12.26□□□□□ -0.45
PARP1-201ENST00000366790 STARD7Q9NQZ5 370 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms