RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 COL11A1P12107 1806 aaPredicted RBP9.68□□□□□ -0.86
MRPL55-211ENST00000366738 STRNO43815 780 aa9.68□□□□□ -0.86
MRPL55-211ENST00000366738 EEF2P13639 858 aaKnown RBP9.68□□□□□ -0.86
MRPL55-211ENST00000366738 ICA1Q05084 483 aa9.68□□□□□ -0.86
MRPL55-211ENST00000366738 TMEM132BQ14DG7 1078 aa9.68□□□□□ -0.86
MRPL55-211ENST00000366738 RNF180Q86T96 592 aa9.68□□□□□ -0.86
MRPL55-211ENST00000366738 NCAPG2Q86XI2 1143 aa9.68□□□□□ -0.86
MRPL55-211ENST00000366738 MICALL1Q8N3F8 863 aa9.68□□□□□ -0.86
MRPL55-211ENST00000366738 SHCBP1Q8NEM2 672 aa9.68□□□□□ -0.86
MRPL55-211ENST00000366738 VCPKMTQ9H867 229 aa9.68□□□□□ -0.86
MRPL55-211ENST00000366738 TBX21Q9UL17 535 aa9.68□□□□□ -0.86
MRPL55-211ENST00000366738 TAF6LQ9Y6J9 622 aa9.68□□□□□ -0.86
MRPL55-211ENST00000366738 ZNFX1Q9P2E3 1918 aaKnown RBP9.68□□□□□ -0.86
MRPL55-211ENST00000366738 PRRC2BQ5JSZ5 2229 aaKnown RBP9.67□□□□□ -0.86
MRPL55-211ENST00000366738 ROBO3Q96MS0 1386 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 DCDC2CA8MYV0 355 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 PATL2C9JE40 543 aaKnown RBP9.67□□□□□ -0.86
MRPL55-211ENST00000366738 FLOT1O75955 427 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 TIMP1P01033 207 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 APPP05067 770 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 PGK2P07205 417 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 ACRP10323 421 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 CSF2RAP15509 400 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 GNAT2P19087 354 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 TFF2Q03403 129 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 TMEM240Q5SV17 173 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 RASIP1Q5U651 963 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 MFSD5Q6N075 450 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 SAMD1Q6SPF0 538 aaPredicted RBP9.67□□□□□ -0.86
MRPL55-211ENST00000366738 ANKRD33Q7Z3H0 272 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 IFNL3Q8IZI9 196 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 REPS2Q8NFH8 660 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 DSCC1Q9BVC3 393 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 C1QTNF1Q9BXJ1 281 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 NKX2-4Q9H2Z4 354 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 STARD7Q9NQZ5 370 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 SLC5A4Q9NY91 659 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 HOXC10Q9NYD6 342 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 ADAMTS5Q9UNA0 930 aa9.67□□□□□ -0.86
MRPL55-211ENST00000366738 RBM8AQ9Y5S9 174 aaKnown RBP9.67□□□□□ -0.86
MRPL55-211ENST00000366738 BRWD1Q9NSI6 2320 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 ZMYM6O95789 1325 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 SYNGAP1Q96PV0 1343 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 SYNRGQ9UMZ2 1314 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 MYADML2A6NDP7 307 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 ADAMTS4O75173 837 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 REC8O95072 547 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 FGAP02671 866 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 RASA1P20936 1047 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 TDO2P48775 406 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 KCNQ1P51787 676 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 ACLYP53396 1101 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 HAND2P61296 217 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 PPIGQ13427 754 aaKnown RBP eCLIP9.66□□□□□ -0.866e-7■■■■□ 20.4
MRPL55-211ENST00000366738 STK11IPQ8N1F8 1099 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 MAP4K1Q92918 833 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 CCDC17Q96LX7 622 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 TOX2Q96NM4 488 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 NUP88Q99567 741 aaPredicted RBP9.66□□□□□ -0.86
MRPL55-211ENST00000366738 TINF2Q9BSI4 451 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 LRFN3Q9BTN0 628 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 USP26Q9BXU7 913 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 PPP1R12CQ9BZL4 782 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 NAPBQ9H115 298 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 MROH8Q9H579 483 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 EPHX3Q9H6B9 360 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 CXXC1Q9P0U4 656 aaPredicted RBP9.66□□□□□ -0.86
MRPL55-211ENST00000366738 YBX2Q9Y2T7 364 aaKnown RBP9.66□□□□□ -0.86
MRPL55-211ENST00000366738 HCN4Q9Y3Q4 1203 aa9.66□□□□□ -0.86
MRPL55-211ENST00000366738 WDR46O15213 610 aaKnown RBP9.65□□□□□ -0.86
MRPL55-211ENST00000366738 CYP21A2P08686 494 aa9.65□□□□□ -0.86
MRPL55-211ENST00000366738 ZNF865P0CJ78 1059 aaPredicted RBP9.65□□□□□ -0.86
MRPL55-211ENST00000366738 FCER1AP12319 257 aa9.65□□□□□ -0.86
MRPL55-211ENST00000366738 BMP1P13497 986 aa9.65□□□□□ -0.86
MRPL55-211ENST00000366738 AKR1A1P14550 325 aa9.65□□□□□ -0.86
MRPL55-211ENST00000366738 IRX5P78411 483 aaPredicted RBP9.65□□□□□ -0.86
MRPL55-211ENST00000366738 COL9A3Q14050 684 aaPredicted RBP9.65□□□□□ -0.86
MRPL55-211ENST00000366738 FAM83BQ5T0W9 1011 aa9.65□□□□□ -0.86
MRPL55-211ENST00000366738 KIAA1211Q6ZU35 1233 aa9.65□□□□□ -0.86
MRPL55-211ENST00000366738 ZNF365Q70YC5 407 aa9.65□□□□□ -0.86
MRPL55-211ENST00000366738 TBC1D10CQ8IV04 446 aa9.65□□□□□ -0.86
MRPL55-211ENST00000366738 ABRAQ8N0Z2 381 aa9.65□□□□□ -0.86
MRPL55-211ENST00000366738 ARHGEF10LQ9HCE6 1279 aa9.65□□□□□ -0.86
MRPL55-211ENST00000366738 ARPP21Q9UBL0 812 aaPredicted RBP9.65□□□□□ -0.86
MRPL55-211ENST00000366738 MSRAQ9UJ68 235 aa9.65□□□□□ -0.86
MRPL55-211ENST00000366738 ZNF214Q9UL59 606 aaPredicted RBP9.65□□□□□ -0.86
MRPL55-211ENST00000366738 IGKV6D-41A0A0C4DH26 115 aa9.64□□□□□ -0.87
MRPL55-211ENST00000366738 VWA5AO00534 786 aa9.64□□□□□ -0.87
MRPL55-211ENST00000366738 SLC27A2O14975 620 aa9.64□□□□□ -0.87
MRPL55-211ENST00000366738 HSPA4P34932 840 aa9.64□□□□□ -0.87
MRPL55-211ENST00000366738 CTDSPL2Q05D32 466 aa9.64□□□□□ -0.87
MRPL55-211ENST00000366738 PPARAQ07869 468 aa9.64□□□□□ -0.87
MRPL55-211ENST00000366738 NECTIN1Q15223 517 aa9.64□□□□□ -0.87
MRPL55-211ENST00000366738 ALX1Q15699 326 aa9.64□□□□□ -0.87
MRPL55-211ENST00000366738 RAB30Q15771 203 aa9.64□□□□□ -0.87
MRPL55-211ENST00000366738 KCNA10Q16322 511 aa9.64□□□□□ -0.87
MRPL55-211ENST00000366738 SBK1Q52WX2 424 aa9.64□□□□□ -0.87
MRPL55-211ENST00000366738 CREB3L3Q68CJ9 461 aa9.64□□□□□ -0.87
MRPL55-211ENST00000366738 GIMAP6Q6P9H5 292 aa9.64□□□□□ -0.87
MRPL55-211ENST00000366738 PSRC1Q6PGN9 363 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms