RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 FEZ1Q99689 392 aa13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 LRFN3Q9BTN0 628 aa13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 PBX4Q9BYU1 374 aa13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 PDRG1Q9NUG6 133 aa13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 TMEM39AQ9NV64 488 aa13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 RAI14Q9P0K7 980 aa13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 SAP30BPQ9UHR5 308 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 NAV1Q8NEY1 1877 aa13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 ZMYM6O95789 1325 aa13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 SPDYE16A6NNV3 312 aaPredicted RBP13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 PATL2C9JE40 543 aaKnown RBP13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 GH2P01242 217 aa13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 FGAP02671 866 aa13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 BMP1P13497 986 aa13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 IGFBP4P22692 258 aa13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 RPS6KB1P23443 525 aa13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 GUCY1A2P33402 732 aa13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 AK2P54819 239 aa13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 PPP4CP60510 307 aa13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 ANKRD1Q15327 319 aa13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 IMMTQ16891 758 aaKnown RBP13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 ZSCAN31Q96LW9 406 aaPredicted RBP13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 NEK1Q96PY6 1258 aa13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.19□□□□□ -0.38e-9■■□□□ 12.1
CSNK1E-202ENST00000366216 NOL10Q9BSC4 688 aaKnown RBP13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 TSPYL2Q9H2G4 693 aaPredicted RBP13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 CXXC1Q9P0U4 656 aaPredicted RBP13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 LIMCH1Q9UPQ0 1083 aa13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 TAF6LQ9Y6J9 622 aa13.19□□□□□ -0.3
CSNK1E-202ENST00000366216 GRXCR1A8MXD5 290 aa13.18□□□□□ -0.3
CSNK1E-202ENST00000366216 STRNO43815 780 aa13.18□□□□□ -0.3
CSNK1E-202ENST00000366216 VCAM1P19320 739 aa13.18□□□□□ -0.3
CSNK1E-202ENST00000366216 DYNLL1P63167 89 aaKnown RBP13.18□□□□□ -0.3
CSNK1E-202ENST00000366216 EVX2Q03828 476 aa13.18□□□□□ -0.3
CSNK1E-202ENST00000366216 KIAA1755Q5JYT7 1200 aa13.18□□□□□ -0.3
CSNK1E-202ENST00000366216 SLC44A5Q8NCS7 719 aa13.18□□□□□ -0.3
CSNK1E-202ENST00000366216 XPNPEP3Q9NQH7 507 aa13.18□□□□□ -0.3
CSNK1E-202ENST00000366216 SH2B1Q9NRF2 756 aaPredicted RBP13.18□□□□□ -0.3
CSNK1E-202ENST00000366216 A0A1W2PQ45 241 aaPredicted RBP13.17□□□□□ -0.3
CSNK1E-202ENST00000366216 A0A1W2PQY0 241 aa13.17□□□□□ -0.3
CSNK1E-202ENST00000366216 MBD4O95243 580 aa13.17□□□□□ -0.3
CSNK1E-202ENST00000366216 TIMP1P01033 207 aa13.17□□□□□ -0.3
CSNK1E-202ENST00000366216 CPA1P15085 419 aa13.17□□□□□ -0.3
CSNK1E-202ENST00000366216 PLCG2P16885 1265 aa13.17□□□□□ -0.3
CSNK1E-202ENST00000366216 CYP7A1P22680 504 aa13.17□□□□□ -0.3
CSNK1E-202ENST00000366216 FAAP100Q0VG06 881 aa13.17□□□□□ -0.3
CSNK1E-202ENST00000366216 AAK1Q2M2I8 961 aa13.17□□□□□ -0.3
CSNK1E-202ENST00000366216 RASIP1Q5U651 963 aa13.17□□□□□ -0.3
CSNK1E-202ENST00000366216 C16orf59Q7L2K0 433 aa13.17□□□□□ -0.3
CSNK1E-202ENST00000366216 ANKRD33Q7Z3H0 272 aa13.17□□□□□ -0.3
CSNK1E-202ENST00000366216 RNF180Q86T96 592 aa13.17□□□□□ -0.3
CSNK1E-202ENST00000366216 TOX2Q96NM4 488 aa13.17□□□□□ -0.3
CSNK1E-202ENST00000366216 MOV10L1Q9BXT6 1211 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-202ENST00000366216 EPHX3Q9H6B9 360 aa13.17□□□□□ -0.3
CSNK1E-202ENST00000366216 SLC5A4Q9NY91 659 aa13.17□□□□□ -0.3
CSNK1E-202ENST00000366216 LAMA4Q16363 1823 aa13.17□□□□□ -0.3
CSNK1E-202ENST00000366216 DCDC2CA8MYV0 355 aa13.16□□□□□ -0.3
CSNK1E-202ENST00000366216 E7EWF7 191 aa13.16□□□□□ -0.3
CSNK1E-202ENST00000366216 ZNF213O14771 459 aa13.16□□□□□ -0.3
CSNK1E-202ENST00000366216 RARBP10826 455 aa13.16□□□□□ -0.3
CSNK1E-202ENST00000366216 USP14P54578 494 aa13.16□□□□□ -0.3
CSNK1E-202ENST00000366216 TFF2Q03403 129 aa13.16□□□□□ -0.3
CSNK1E-202ENST00000366216 TMEM31Q5JXX7 168 aa13.16□□□□□ -0.3
CSNK1E-202ENST00000366216 TMEM240Q5SV17 173 aa13.16□□□□□ -0.3
CSNK1E-202ENST00000366216 NAA16Q6N069 864 aaPredicted RBP13.16□□□□□ -0.3
CSNK1E-202ENST00000366216 TATDN1Q6P1N9 297 aa13.16□□□□□ -0.3
CSNK1E-202ENST00000366216 CCDC174Q6PII3 467 aa13.16□□□□□ -0.3
CSNK1E-202ENST00000366216 STOX1Q6ZVD7 989 aa13.16□□□□□ -0.3
CSNK1E-202ENST00000366216 DHX32Q7L7V1 743 aaKnown RBP13.16□□□□□ -0.3
CSNK1E-202ENST00000366216 LENG1Q96BZ8 264 aaPredicted RBP13.16□□□□□ -0.3
CSNK1E-202ENST00000366216 KIAA1683Q9H0B3 1180 aa13.16□□□□□ -0.3
CSNK1E-202ENST00000366216 RPAP3Q9H6T3 665 aaPredicted RBP13.16□□□□□ -0.3
CSNK1E-202ENST00000366216 MSRAQ9UJ68 235 aa13.16□□□□□ -0.3
CSNK1E-202ENST00000366216 WDFY4Q6ZS81 3184 aa13.16□□□□□ -0.3
CSNK1E-202ENST00000366216 MAGEB6P1A0A0J9YX57 407 aa13.15□□□□□ -0.3
CSNK1E-202ENST00000366216 A0A1W2PRG0 241 aa13.15□□□□□ -0.3
CSNK1E-202ENST00000366216 BAG3O95817 575 aa13.15□□□□□ -0.3
CSNK1E-202ENST00000366216 PGK1P00558 417 aa13.15□□□□□ -0.3
CSNK1E-202ENST00000366216 TAL1P17542 331 aaPredicted RBP13.15□□□□□ -0.3
CSNK1E-202ENST00000366216 KCNQ1P51787 676 aa13.15□□□□□ -0.3
CSNK1E-202ENST00000366216 PPIGQ13427 754 aaKnown RBP eCLIP13.15□□□□□ -0.31e-6■■□□□ 12.1
CSNK1E-202ENST00000366216 RAB30Q15771 203 aa13.15□□□□□ -0.3
CSNK1E-202ENST00000366216 MFSD5Q6N075 450 aa13.15□□□□□ -0.3
CSNK1E-202ENST00000366216 IFNL3Q8IZI9 196 aa13.15□□□□□ -0.3
CSNK1E-202ENST00000366216 LCORLQ8N3X6 602 aa13.15□□□□□ -0.3
CSNK1E-202ENST00000366216 FBXL16Q8N461 479 aa13.15□□□□□ -0.3
CSNK1E-202ENST00000366216 RIOK1Q9BRS2 568 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-202ENST00000366216 ANP32EQ9BTT0 268 aa13.15□□□□□ -0.3
CSNK1E-202ENST00000366216 NACAP1Q9BZK3 213 aa13.15□□□□□ -0.3
CSNK1E-202ENST00000366216 ARMT1Q9H993 441 aa13.15□□□□□ -0.3
CSNK1E-202ENST00000366216 ROBO3Q96MS0 1386 aa13.15□□□□□ -0.3
CSNK1E-202ENST00000366216 SCN5AQ14524 2016 aa13.15□□□□□ -0.3
CSNK1E-202ENST00000366216 GSG1L2A8MUP6 293 aa13.14□□□□□ -0.31
CSNK1E-202ENST00000366216 HLA-DOAP06340 250 aa13.14□□□□□ -0.31
CSNK1E-202ENST00000366216 ERCC3P19447 782 aa13.14□□□□□ -0.31
CSNK1E-202ENST00000366216 IRX5P78411 483 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-202ENST00000366216 NUCB2P80303 420 aa13.14□□□□□ -0.31
CSNK1E-202ENST00000366216 EXOSC10Q01780 885 aaKnown RBP13.14□□□□□ -0.31
CSNK1E-202ENST00000366216 TOB2Q14106 344 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-202ENST00000366216 RAB3GAP1Q15042 981 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms