RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 CNGA4Q8IV77 575 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 UIMC1Q96RL1 719 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 L1RE1Q9UN81 338 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 CASP8Q14790 479 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 IQUBQ8NA54 791 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 SLC44A5Q8NCS7 719 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 DRC1Q96MC2 740 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 LACRTQ9GZZ8 138 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 SMARCAL1Q9NZC9 954 aa11.92□□□□□ -0.5
SMC3-201ENST00000361804 PARP1P09874 1014 aaKnown RBP11.91□□□□□ -0.5
SMC3-201ENST00000361804 NAALADL2Q58DX5 795 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 CLEC4GQ6UXB4 293 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 CTAGE15A4D2H0 777 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 CTAGE8P0CG41 777 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 MYBL2P10244 700 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 STAT6P42226 847 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 HERVK_113P62684 666 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 FAM193AP78312 1265 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 INF2Q27J81 1249 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 WDR59Q6PJI9 974 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 CTAGE6Q86UF2 777 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 CTAGE4Q8IX94 777 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 PROM2Q8N271 834 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 FERMT2Q96AC1 680 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 USP17L3A6NCW0 530 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 USP17L4A6NCW7 530 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 NDUFA10O95299 355 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 PLEKP08567 350 aaPredicted RBP11.91□□□□□ -0.5
SMC3-201ENST00000361804 SCG2P13521 617 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 MECOMQ03112 1051 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 USP17L1Q7RTZ2 530 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 KRT26Q7Z3Y9 468 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 CTCFLQ8NI51 663 aaPredicted RBP11.91□□□□□ -0.5
SMC3-201ENST00000361804 TRIM34Q9BYJ4 488 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 BSDC1Q9NW68 430 aaPredicted RBP11.91□□□□□ -0.5
SMC3-201ENST00000361804 ANAPC4Q9UJX5 808 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 MYO6Q9UM54 1294 aa11.91□□□□□ -0.5
SMC3-201ENST00000361804 EPN1Q9Y6I3 576 aaPredicted RBP11.91□□□□□ -0.5
SMC3-201ENST00000361804 MACROD2A1Z1Q3 448 aa11.9□□□□□ -0.5
SMC3-201ENST00000361804 TNNT3P45378 269 aaPredicted RBP11.9□□□□□ -0.5
SMC3-201ENST00000361804 ATP2B2Q01814 1243 aa11.9□□□□□ -0.5
SMC3-201ENST00000361804 LIMA1Q9UHB6 759 aaKnown RBP11.9□□□□□ -0.5
SMC3-201ENST00000361804 TSPY2A6NKD2 308 aa11.9□□□□□ -0.5
SMC3-201ENST00000361804 AMPD2Q01433 879 aa11.9□□□□□ -0.5
SMC3-201ENST00000361804 NFIXQ14938 502 aa11.9□□□□□ -0.5
SMC3-201ENST00000361804 BRD3Q15059 726 aa11.9□□□□□ -0.5
SMC3-201ENST00000361804 CEP112Q8N8E3 955 aa11.9□□□□□ -0.5
SMC3-201ENST00000361804 ARHGEF1Q92888 912 aaKnown RBP11.9□□□□□ -0.5
SMC3-201ENST00000361804 NSUN4Q96CB9 384 aaKnown RBP11.9□□□□□ -0.5
SMC3-201ENST00000361804 CTAGE1Q96RT6 745 aa11.9□□□□□ -0.5
SMC3-201ENST00000361804 POLD4Q9HCU8 107 aa11.9□□□□□ -0.5
SMC3-201ENST00000361804 BRMS1Q9HCU9 246 aa11.9□□□□□ -0.5
SMC3-201ENST00000361804 GNL3LQ9NVN8 582 aaKnown RBP11.9□□□□□ -0.5
SMC3-201ENST00000361804 EHD2Q9NZN4 543 aa11.9□□□□□ -0.5
SMC3-201ENST00000361804 PPARDQ03181 441 aa11.9□□□□□ -0.5
SMC3-201ENST00000361804 CYP26C1Q6V0L0 522 aa11.9□□□□□ -0.5
SMC3-201ENST00000361804 GPR101Q96P66 508 aaPredicted RBP11.9□□□□□ -0.5
SMC3-201ENST00000361804 FEZ2Q9UHY8 353 aaPredicted RBP11.9□□□□□ -0.5
SMC3-201ENST00000361804 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.9□□□□□ -0.5
SMC3-201ENST00000361804 TULP2O00295 520 aa11.89□□□□□ -0.51
SMC3-201ENST00000361804 PDE2AO00408 941 aaPredicted RBP11.89□□□□□ -0.51
SMC3-201ENST00000361804 PIP4K2BP78356 416 aa11.89□□□□□ -0.51
SMC3-201ENST00000361804 RCSD1Q6JBY9 416 aa11.89□□□□□ -0.51
SMC3-201ENST00000361804 TXLNBQ8N3L3 684 aa11.89□□□□□ -0.51
SMC3-201ENST00000361804 DCP1AQ9NPI6 582 aaPredicted RBP11.89□□□□□ -0.51
SMC3-201ENST00000361804 RWDD2AQ9UIY3 292 aa11.89□□□□□ -0.51
SMC3-201ENST00000361804 SNED1Q8TER0 1413 aa11.89□□□□□ -0.51
SMC3-201ENST00000361804 FCER1AP12319 257 aa11.89□□□□□ -0.51
SMC3-201ENST00000361804 EZH2Q15910 746 aaKnown RBP11.89□□□□□ -0.51
SMC3-201ENST00000361804 PARP10Q53GL7 1025 aa11.89□□□□□ -0.51
SMC3-201ENST00000361804 CCDC122Q5T0U0 273 aa11.89□□□□□ -0.51
SMC3-201ENST00000361804 HDXQ7Z353 690 aa11.89□□□□□ -0.51
SMC3-201ENST00000361804 TMTC1Q8IUR5 882 aa11.89□□□□□ -0.51
SMC3-201ENST00000361804 MSANTD4Q8NCY6 345 aa11.89□□□□□ -0.51
SMC3-201ENST00000361804 TRIM47Q96LD4 638 aa11.89□□□□□ -0.51
SMC3-201ENST00000361804 NAA15Q9BXJ9 866 aaKnown RBP11.89□□□□□ -0.51
SMC3-201ENST00000361804 TTF2Q9UNY4 1162 aaKnown RBP11.89□□□□□ -0.51
SMC3-201ENST00000361804 RASSF10A6NK89 507 aa11.89□□□□□ -0.51
SMC3-201ENST00000361804 GTPBP6O43824 516 aaPredicted RBP11.89□□□□□ -0.51
SMC3-201ENST00000361804 ZNF658Q5TYW1 1059 aaPredicted RBP11.89□□□□□ -0.51
SMC3-201ENST00000361804 C4orf32Q8N8J7 132 aa11.89□□□□□ -0.51
SMC3-201ENST00000361804 RAB21Q9UL25 225 aa11.89□□□□□ -0.51
SMC3-201ENST00000361804 ATP8B1O43520 1251 aa11.88□□□□□ -0.51
SMC3-201ENST00000361804 MCM9Q9NXL9 1143 aa11.88□□□□□ -0.51
SMC3-201ENST00000361804 NARFQ9UHQ1 456 aa11.88□□□□□ -0.51
SMC3-201ENST00000361804 C2orf54Q08AI8 447 aa11.88□□□□□ -0.51
SMC3-201ENST00000361804 HEATR3Q7Z4Q2 680 aa11.88□□□□□ -0.51
SMC3-201ENST00000361804 MB21D1Q8N884 522 aa11.88□□□□□ -0.51
SMC3-201ENST00000361804 PCMTD1Q96MG8 357 aaPredicted RBP11.88□□□□□ -0.51
SMC3-201ENST00000361804 IL17RBQ9NRM6 502 aa11.88□□□□□ -0.51
SMC3-201ENST00000361804 MATR3P43243 847 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMC3-201ENST00000361804 CXCR5P32302 372 aa11.88□□□□□ -0.51
SMC3-201ENST00000361804 TFAP4Q01664 338 aa11.88□□□□□ -0.51
SMC3-201ENST00000361804 CCDC178Q5BJE1 867 aa11.88□□□□□ -0.51
SMC3-201ENST00000361804 ANKRD18AQ8IVF6 992 aa11.88□□□□□ -0.51
SMC3-201ENST00000361804 HDAC7Q8WUI4 952 aa11.88□□□□□ -0.51
SMC3-201ENST00000361804 C8orf37Q96NL8 207 aa11.88□□□□□ -0.51
SMC3-201ENST00000361804 EPHB6O15197 1021 aa11.87□□□□□ -0.51
SMC3-201ENST00000361804 PFKFB3Q16875 520 aaPredicted RBP11.87□□□□□ -0.51
SMC3-201ENST00000361804 ANKRD13CQ8N6S4 541 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms